FFCP PHASE1:Mm9::chr12:11332712..11332725,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=42 | |MCL_coexpression_id=42 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:11332712..11332725,- | |||
|description=CAGE_peak_at_chr12:11332712..11332725,- | |description=CAGE_peak_at_chr12:11332712..11332725,- | ||
|id=chr12:11332712..11332725,- | |id=chr12:11332712..11332725,- | ||
|ontology_enrichment_celltype=CL:0002614!4.44e-09!3;CL:0002612!1.70e-08!3 | |ontology_enrichment_celltype=CL:0002614!4.44e-09!3;CL:0002612!1.70e-08!3 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.26e-23!52;UBERON:0005068!1.26e-23!52;UBERON:0006241!1.26e-23!52;UBERON:0007135!1.26e-23!52;UBERON:0002616!1.38e-18!49;UBERON:0000955!4.01e-18!50;UBERON:0006238!4.01e-18!50;UBERON:0002020!2.47e-17!34;UBERON:0001017!6.46e-17!73;UBERON:0005743!6.46e-17!73;UBERON:0002298!1.66e-16!6;UBERON:0000073!2.54e-16!75;UBERON:0001016!2.54e-16!75;UBERON:0002346!6.40e-16!71;UBERON:0003075!6.40e-16!71;UBERON:0007284!6.40e-16!71;UBERON:0003076!3.95e-14!12;UBERON:0003057!3.95e-14!12;UBERON:0002791!1.46e-13!29;UBERON:0003528!1.46e-13!29;UBERON:0001893!1.46e-13!29;UBERON:0000033!1.94e-13!63;UBERON:0003080!2.72e-12!40;UBERON:0002950!4.23e-11!4;UBERON:0001891!4.23e-11!4;UBERON:0009616!4.23e-11!4;UBERON:0002780!5.05e-11!39;UBERON:0001890!5.05e-11!39;UBERON:0006240!5.05e-11!39;UBERON:0004121!1.37e-10!102;UBERON:0000924!1.37e-10!102;UBERON:0006601!1.37e-10!102;UBERON:0002021!5.96e-10!10;UBERON:0000411!5.96e-10!10;UBERON:0001950!5.96e-10!10;UBERON:0000025!7.15e-10!114;UBERON:0004111!7.88e-10!122;UBERON:0003056!1.98e-09!49;UBERON:0002038!4.44e-09!3;UBERON:0002308!4.44e-09!3;UBERON:0009663!4.44e-09!3;UBERON:0009661!4.44e-09!3;UBERON:0006331!4.44e-09!3;UBERON:0000125!4.44e-09!3;UBERON:0007811!1.22e-08!86;UBERON:0002420!1.61e-08!8;UBERON:0007245!1.61e-08!8;UBERON:0010009!1.61e-08!8;UBERON:0010011!1.61e-08!8;UBERON:0000454!1.61e-08!8;UBERON:0002257!1.70e-08!3;UBERON:0004733!2.32e-08!6;UBERON:0004732!2.32e-08!6;UBERON:0002028!2.32e-08!6;UBERON:0007277!2.32e-08!6;UBERON:0000153!1.57e-07!94;UBERON:0002240!2.64e-07!6;UBERON:0005174!2.64e-07!6;UBERON:0001137!2.64e-07!6;UBERON:0000956!2.75e-07!21;UBERON:0001869!2.75e-07!21;UBERON:0000203!2.75e-07!21;UBERON:0002619!3.29e-07!17;UBERON:0001896!4.85e-07!2;UBERON:0005290!4.85e-07!2;UBERON:0010096!4.85e-07!2 | |ontology_enrichment_uberon=UBERON:0001049!1.26e-23!52;UBERON:0005068!1.26e-23!52;UBERON:0006241!1.26e-23!52;UBERON:0007135!1.26e-23!52;UBERON:0002616!1.38e-18!49;UBERON:0000955!4.01e-18!50;UBERON:0006238!4.01e-18!50;UBERON:0002020!2.47e-17!34;UBERON:0001017!6.46e-17!73;UBERON:0005743!6.46e-17!73;UBERON:0002298!1.66e-16!6;UBERON:0000073!2.54e-16!75;UBERON:0001016!2.54e-16!75;UBERON:0002346!6.40e-16!71;UBERON:0003075!6.40e-16!71;UBERON:0007284!6.40e-16!71;UBERON:0003076!3.95e-14!12;UBERON:0003057!3.95e-14!12;UBERON:0002791!1.46e-13!29;UBERON:0003528!1.46e-13!29;UBERON:0001893!1.46e-13!29;UBERON:0000033!1.94e-13!63;UBERON:0003080!2.72e-12!40;UBERON:0002950!4.23e-11!4;UBERON:0001891!4.23e-11!4;UBERON:0009616!4.23e-11!4;UBERON:0002780!5.05e-11!39;UBERON:0001890!5.05e-11!39;UBERON:0006240!5.05e-11!39;UBERON:0004121!1.37e-10!102;UBERON:0000924!1.37e-10!102;UBERON:0006601!1.37e-10!102;UBERON:0002021!5.96e-10!10;UBERON:0000411!5.96e-10!10;UBERON:0001950!5.96e-10!10;UBERON:0000025!7.15e-10!114;UBERON:0004111!7.88e-10!122;UBERON:0003056!1.98e-09!49;UBERON:0002038!4.44e-09!3;UBERON:0002308!4.44e-09!3;UBERON:0009663!4.44e-09!3;UBERON:0009661!4.44e-09!3;UBERON:0006331!4.44e-09!3;UBERON:0000125!4.44e-09!3;UBERON:0007811!1.22e-08!86;UBERON:0002420!1.61e-08!8;UBERON:0007245!1.61e-08!8;UBERON:0010009!1.61e-08!8;UBERON:0010011!1.61e-08!8;UBERON:0000454!1.61e-08!8;UBERON:0002257!1.70e-08!3;UBERON:0004733!2.32e-08!6;UBERON:0004732!2.32e-08!6;UBERON:0002028!2.32e-08!6;UBERON:0007277!2.32e-08!6;UBERON:0000153!1.57e-07!94;UBERON:0002240!2.64e-07!6;UBERON:0005174!2.64e-07!6;UBERON:0001137!2.64e-07!6;UBERON:0000956!2.75e-07!21;UBERON:0001869!2.75e-07!21;UBERON:0000203!2.75e-07!21;UBERON:0002619!3.29e-07!17;UBERON:0001896!4.85e-07!2;UBERON:0005290!4.85e-07!2;UBERON:0010096!4.85e-07!2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,9.27e-34,6;UBERON:0004732,9.27e-34,6;UBERON:0002028,9.27e-34,6;UBERON:0007277,9.27e-34,6;UBERON:0001896,1.02e-25,2;UBERON:0002298,1.02e-25,2;UBERON:0005290,1.02e-25,2;UBERON:0010096,1.02e-25,2;UBERON:0003076,3.33e-17,12;UBERON:0003057,3.33e-17,12;UBERON:0002037,1.17e-13,4;UBERON:0002680,1.17e-13,4;UBERON:0001895,1.17e-13,4;UBERON:0010092,1.17e-13,4;UBERON:0006215,1.17e-13,4;UBERON:0002616,1.70e-13,46;UBERON:0000955,3.25e-13,47;UBERON:0006238,3.25e-13,47;UBERON:0001049,5.81e-12,52;UBERON:0005068,5.81e-12,52;UBERON:0006241,5.81e-12,52;UBERON:0007135,5.81e-12,52;UBERON:0000073,1.59e-11,54;UBERON:0002346,9.52e-10,64;UBERON:0003075,9.52e-10,64;UBERON:0007284,9.52e-10,64;UBERON:0010371,1.47e-08,73;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75;UBERON:0010314,8.41e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0.279182999001381,1.12552522006336,0.61119299110724,0.294628585473668,0.569486723196412,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,12.1479089951804,0,0,0,0,0.149790639404823,0.915001205637253,0.251308704225729,0.347648640384553,0.255715457330331,0,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,1.12385412991454,1.64096361229084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0.564751842617067,0,0,0.68741272937475,0,0,1.35004500046361,0.45032120322422,0.906284817968409,1.55328093525546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0.263069711437843,0,0,0.118635018124174,0,0,0,0,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0.279182999001381,1.12552522006336,0.61119299110724,0.294628585473668,0.569486723196412,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,12.1479089951804,0,0,0,0,0.149790639404823,0.915001205637253,0.251308704225729,0.347648640384553,0.255715457330331,0,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,1.12385412991454,1.64096361229084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0.564751842617067,0,0,0.68741272937475,0,0,1.35004500046361,0.45032120322422,0.906284817968409,1.55328093525546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0.263069711437843,0,0,0.118635018124174,0,0,0,0,0,0,0.429742108096597,0,0,0 | ||
|short_description=p@chr12:11332712..11332725,- | |short_description=p@chr12:11332712..11332725,- | ||
}} | }} |
Latest revision as of 18:46, 4 August 2015
Short description: | p@chr12:11332712..11332725, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:11332712..11332725, - |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 9.27e-34 | 6 |
segmental subdivision of nervous system | 9.27e-34 | 6 |
hindbrain | 9.27e-34 | 6 |
presumptive hindbrain | 9.27e-34 | 6 |
medulla oblongata | 1.02e-25 | 2 |
brainstem | 1.02e-25 | 2 |
myelencephalon | 1.02e-25 | 2 |
future myelencephalon | 1.02e-25 | 2 |
posterior neural tube | 3.33e-17 | 12 |
chordal neural plate | 3.33e-17 | 12 |
cerebellum | 1.17e-13 | 4 |
regional part of metencephalon | 1.17e-13 | 4 |
metencephalon | 1.17e-13 | 4 |
future metencephalon | 1.17e-13 | 4 |
rhombic lip | 1.17e-13 | 4 |
regional part of brain | 1.70e-13 | 46 |
brain | 3.25e-13 | 47 |
future brain | 3.25e-13 | 47 |
neural tube | 5.81e-12 | 52 |
neural rod | 5.81e-12 | 52 |
future spinal cord | 5.81e-12 | 52 |
neural keel | 5.81e-12 | 52 |
regional part of nervous system | 1.59e-11 | 54 |
neurectoderm | 9.52e-10 | 64 |
neural plate | 9.52e-10 | 64 |
presumptive neural plate | 9.52e-10 | 64 |
ecto-epithelium | 1.47e-08 | 73 |
central nervous system | 1.47e-08 | 73 |
nervous system | 2.47e-08 | 75 |
structure with developmental contribution from neural crest | 8.41e-07 | 92 |