FFCP PHASE1:Hg19::chr2:33172012..33172028,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:33172012..33172028,+
|short_description=p3@LTBP1
|description=CAGE_peak_3_at_LTBP1_5end
|association_with_transcript=-10bp_to_ENST00000404816_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4052 | |EntrezGene=4052 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6714 | |HGNC=6714 | ||
|TSSclassifier=strong | |||
|UniProt=Q14766 | |UniProt=Q14766 | ||
|association_with_transcript=-10bp_to_ENST00000404816_5end | |||
|cluster_id=chr2:33172012..33172028,+ | |||
|description=CAGE_peak_3_at_LTBP1_5end | |||
|id=chr2:33172012..33172028,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;4.20e-10;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.78e-10,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!8.34e-15!659;UBERON:0000481!3.21e-11!347;UBERON:0000478!1.84e-10!24;UBERON:0003103!2.98e-10!69;UBERON:0004111!7.28e-10!241;UBERON:0000119!1.01e-09!312;UBERON:0000467!1.61e-09!625;UBERON:0000483!2.43e-09!309;UBERON:0000480!2.90e-09!626;UBERON:0005256!8.28e-09!143;UBERON:0003914!1.10e-08!118;UBERON:0005156!1.13e-08!59;UBERON:0000990!1.13e-08!59;UBERON:0000064!1.15e-08!219;UBERON:0005631!1.26e-08!14;UBERON:0000158!1.26e-08!14;UBERON:0000477!1.63e-08!286;UBERON:0000475!2.76e-08!365;UBERON:0000922!3.20e-08!612;UBERON:0001009!4.63e-08!113;UBERON:0002100!5.11e-08!216;UBERON:0004872!6.98e-08!84;UBERON:0003133!2.57e-07!48;UBERON:0003104!2.83e-07!238;UBERON:0009142!2.83e-07!238;UBERON:0002050!3.16e-07!605;UBERON:0005423!3.16e-07!605;UBERON:0004923!4.45e-07!57;UBERON:0004535!4.57e-07!110;UBERON:0004175!5.57e-07!25;UBERON:0002049!5.63e-07!79;UBERON:0007798!5.63e-07!79;UBERON:0000923!6.10e-07!604;UBERON:0005291!6.10e-07!604;UBERON:0006598!6.10e-07!604;UBERON:0002532!6.10e-07!604;UBERON:0001008!8.17e-07!45;UBERON:0000025!9.70e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.27e-10;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,4.76e-12,160;UBERON:0009142,4.76e-12,160;UBERON:0000478,8.26e-11,24;UBERON:0003103,3.46e-10,68;UBERON:0005631,6.64e-09,14;UBERON:0000158,6.64e-09,14;UBERON:0004111,1.09e-08,240;UBERON:0005156,1.09e-08,59;UBERON:0000990,1.09e-08,59;UBERON:0000119,1.18e-08,309;UBERON:0001008,1.79e-08,48;UBERON:0000483,2.75e-08,306;UBERON:0003914,3.13e-08,117;UBERON:0006554,5.00e-08,47;UBERON:0004872,1.28e-07,83;UBERON:0003133,1.79e-07,48;UBERON:0001009,1.93e-07,112;UBERON:0005256,2.53e-07,122;UBERON:0004175,3.72e-07,25;UBERON:0002100,4.31e-07,199;UBERON:0000922,9.52e-07,592 | |||
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| ||
|short_description=p3@LTBP1 | |||
}} | }} |
Latest revision as of 23:34, 16 September 2015
Short description: | p3@LTBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LTBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_ENST00000404816_5end |
EntrezGene: | LTBP1 |
HGNC: | 6714 |
UniProt: | Q14766 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.78e-10 | 19 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 4.76e-12 | 160 |
entire embryonic mesenchyme | 4.76e-12 | 160 |
extraembryonic structure | 8.26e-11 | 24 |
compound organ | 3.46e-10 | 68 |
extraembryonic membrane | 6.64e-09 | 14 |
membranous layer | 6.64e-09 | 14 |
anatomical conduit | 1.09e-08 | 240 |
reproductive structure | 1.09e-08 | 59 |
reproductive system | 1.09e-08 | 59 |
cell layer | 1.18e-08 | 309 |
renal system | 1.79e-08 | 48 |
epithelium | 2.75e-08 | 306 |
epithelial tube | 3.13e-08 | 117 |
urinary system structure | 5.00e-08 | 47 |
splanchnic layer of lateral plate mesoderm | 1.28e-07 | 83 |
reproductive organ | 1.79e-07 | 48 |
circulatory system | 1.93e-07 | 112 |
trunk mesenchyme | 2.53e-07 | 122 |
internal genitalia | 3.72e-07 | 25 |
trunk | 4.31e-07 | 199 |
embryo | 9.52e-07 | 592 |