FFCP PHASE1:Mm9::chr18:57302491..57302512,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70417 | |EntrezGene=70417 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=112 | |MCL_coexpression_id=112 | ||
|TSSclassifier=NA | |||
|UniProt=Q6DIB5 | |UniProt=Q6DIB5 | ||
|association_with_transcript=51bp_to_ENSMUST00000139892,uc008eza.1_5end | |association_with_transcript=51bp_to_ENSMUST00000139892,uc008eza.1_5end | ||
|cluster_id=chr18:57302491..57302512,+ | |||
|description=CAGE_peak_12_at_Megf10_5end | |description=CAGE_peak_12_at_Megf10_5end | ||
|id=chr18:57302491..57302512,+ | |id=chr18:57302491..57302512,+ | ||
|ontology_enrichment_celltype=CL:0000333!1.10e-09!10;CL:0000095!1.10e-09!10;CL:0000243!1.10e-09!10;CL:0000123!1.10e-09!10;CL:0000125!1.10e-09!10;CL:0000030!1.10e-09!10;CL:0000339!1.10e-09!10;CL:0000325!2.55e-09!2;CL:0000217!2.55e-09!2;CL:0000328!2.55e-09!2;CL:0002573!2.55e-09!2;CL:0002376!2.55e-09!2;CL:0000218!2.55e-09!2;CL:0000692!2.55e-09!2;CL:0002377!2.55e-09!2;CL:0002375!2.55e-09!2;CL:0002319!2.74e-07!43;CL:0000221!4.37e-07!44;CL:0000133!4.37e-07!44;CL:0000107!5.50e-07!9 | |ontology_enrichment_celltype=CL:0000333!1.10e-09!10;CL:0000095!1.10e-09!10;CL:0000243!1.10e-09!10;CL:0000123!1.10e-09!10;CL:0000125!1.10e-09!10;CL:0000030!1.10e-09!10;CL:0000339!1.10e-09!10;CL:0000325!2.55e-09!2;CL:0000217!2.55e-09!2;CL:0000328!2.55e-09!2;CL:0002573!2.55e-09!2;CL:0002376!2.55e-09!2;CL:0000218!2.55e-09!2;CL:0000692!2.55e-09!2;CL:0002377!2.55e-09!2;CL:0002375!2.55e-09!2;CL:0002319!2.74e-07!43;CL:0000221!4.37e-07!44;CL:0000133!4.37e-07!44;CL:0000107!5.50e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000217,1.73e-30,2;CL:0000328,1.73e-30,2;CL:0002573,1.73e-30,2;CL:0002376,1.73e-30,2;CL:0000218,1.73e-30,2;CL:0000692,1.73e-30,2;CL:0002377,1.73e-30,2;CL:0002375,1.73e-30,2;CL:0000215,1.01e-20,3;CL:0000333,6.53e-07,10;CL:0000095,6.53e-07,10;CL:0000243,6.53e-07,10;CL:0000123,6.53e-07,10;CL:0000125,6.53e-07,10;CL:0000030,6.53e-07,10;CL:0000339,6.53e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!3.09e-15!9;UBERON:0000019!3.09e-15!9;UBERON:0000047!3.09e-15!9;UBERON:0004088!3.09e-15!9;UBERON:0002104!3.09e-15!9;UBERON:0001456!3.09e-15!9;UBERON:0003072!3.09e-15!9;UBERON:0003071!3.09e-15!9;UBERON:0004128!3.09e-15!9;UBERON:0000010!1.91e-12!11;UBERON:0001444!2.29e-12!11;UBERON:0000020!2.74e-11!12;UBERON:0001032!2.74e-11!12;UBERON:0004456!2.74e-11!12;UBERON:0005085!2.24e-10!13;UBERON:0004121!6.17e-09!102;UBERON:0000924!6.17e-09!102;UBERON:0006601!6.17e-09!102;UBERON:0002410!5.50e-07!9 | |ontology_enrichment_uberon=UBERON:0000970!3.09e-15!9;UBERON:0000019!3.09e-15!9;UBERON:0000047!3.09e-15!9;UBERON:0004088!3.09e-15!9;UBERON:0002104!3.09e-15!9;UBERON:0001456!3.09e-15!9;UBERON:0003072!3.09e-15!9;UBERON:0003071!3.09e-15!9;UBERON:0004128!3.09e-15!9;UBERON:0000010!1.91e-12!11;UBERON:0001444!2.29e-12!11;UBERON:0000020!2.74e-11!12;UBERON:0001032!2.74e-11!12;UBERON:0004456!2.74e-11!12;UBERON:0005085!2.24e-10!13;UBERON:0004121!6.17e-09!102;UBERON:0000924!6.17e-09!102;UBERON:0006601!6.17e-09!102;UBERON:0002410!5.50e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.81e-26,9;UBERON:0000019,4.81e-26,9;UBERON:0000047,4.81e-26,9;UBERON:0010312,4.81e-26,9;UBERON:0004088,4.81e-26,9;UBERON:0002104,4.81e-26,9;UBERON:0001456,4.81e-26,9;UBERON:0003072,4.81e-26,9;UBERON:0004128,4.81e-26,9;UBERON:0003071,4.81e-26,9;UBERON:0001444,1.92e-21,11;UBERON:0000020,1.02e-19,12;UBERON:0001032,1.02e-19,12;UBERON:0004456,1.02e-19,12;UBERON:0000033,2.98e-18,13;UBERON:0005085,2.98e-18,13;UBERON:0007811,6.13e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,12.6462742866417,19.724177187871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0.180062129805349,1.80845781402858,2.10913147369116,2.69038812598185,1.40552586839593,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,12.6462742866417,19.724177187871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0.180062129805349,1.80845781402858,2.10913147369116,2.69038812598185,1.40552586839593,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0,0,0 | ||
|short_description=p12@Megf10 | |short_description=p12@Megf10 | ||
}} | }} |
Latest revision as of 12:26, 1 October 2015
Short description: | p12@Megf10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Megf10_5end |
Coexpression cluster: | MCL_coexpression_mm9:112 |
Association with transcript: | 51bp_to_ENSMUST00000139892, uc008eza.1_5end |
EntrezGene: | Megf10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insulating cell | 1.73e-30 | 2 |
myelin accumulating cell | 1.73e-30 | 2 |
Schwann cell | 1.73e-30 | 2 |
non-myelinating Schwann cell | 1.73e-30 | 2 |
myelinating Schwann cell;;Schwann cell | 1.73e-30 | 2 |
terminal Schwann cell | 1.73e-30 | 2 |
immature Schwann cell | 1.73e-30 | 2 |
Schwann cell precursor | 1.73e-30 | 2 |
barrier cell | 1.01e-20 | 3 |
migratory neural crest cell | 6.53e-07 | 10 |
neuron associated cell | 6.53e-07 | 10 |
glial cell (sensu Vertebrata) | 6.53e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 6.53e-07 | 10 |
glial cell | 6.53e-07 | 10 |
glioblast | 6.53e-07 | 10 |
glioblast (sensu Vertebrata) | 6.53e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
eye | 4.81e-26 | 9 |
camera-type eye | 4.81e-26 | 9 |
simple eye | 4.81e-26 | 9 |
immature eye | 4.81e-26 | 9 |
ocular region | 4.81e-26 | 9 |
visual system | 4.81e-26 | 9 |
face | 4.81e-26 | 9 |
optic cup | 4.81e-26 | 9 |
optic vesicle | 4.81e-26 | 9 |
eye primordium | 4.81e-26 | 9 |
subdivision of head | 1.92e-21 | 11 |
sense organ | 1.02e-19 | 12 |
sensory system | 1.02e-19 | 12 |
entire sense organ system | 1.02e-19 | 12 |
head | 2.98e-18 | 13 |
ectodermal placode | 2.98e-18 | 13 |
craniocervical region | 6.13e-07 | 36 |