FFCP PHASE1:Mm9::chr3:95023823..95023839,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=596 | |MCL_coexpression_id=596 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:95023823..95023839,- | |||
|description=CAGE_peak_at_chr3:95023823..95023839,- | |description=CAGE_peak_at_chr3:95023823..95023839,- | ||
|id=chr3:95023823..95023839,- | |id=chr3:95023823..95023839,- | ||
|ontology_enrichment_celltype=CL:0000540!1.91e-18!33;CL:0000047!1.91e-18!33;CL:0000031!1.91e-18!33;CL:0000404!1.91e-18!33;CL:0000117!5.21e-18!23;CL:0000337!5.21e-18!23;CL:0000393!4.47e-15!39;CL:0000211!4.47e-15!39;CL:0002319!4.52e-15!43;CL:0000221!1.85e-14!44;CL:0000133!1.85e-14!44;CL:0000055!2.72e-12!50 | |ontology_enrichment_celltype=CL:0000540!1.91e-18!33;CL:0000047!1.91e-18!33;CL:0000031!1.91e-18!33;CL:0000404!1.91e-18!33;CL:0000117!5.21e-18!23;CL:0000337!5.21e-18!23;CL:0000393!4.47e-15!39;CL:0000211!4.47e-15!39;CL:0002319!4.52e-15!43;CL:0000221!1.85e-14!44;CL:0000133!1.85e-14!44;CL:0000055!2.72e-12!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.54e-21,23;CL:0000337,4.54e-21,23;CL:0000540,6.75e-17,33;CL:0000047,6.75e-17,33;CL:0000031,6.75e-17,33;CL:0000404,6.75e-17,33;CL:0000393,5.44e-14,39;CL:0000211,5.44e-14,39;CL:0000120,8.90e-14,3;CL:0002613,1.45e-13,3;CL:0002319,1.67e-12,43;CL:0000221,3.58e-12,44;CL:0000133,3.58e-12,44;CL:0002609,4.89e-07,6;CL:0002321,6.71e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.70e-21!73;UBERON:0005743!2.70e-21!73;UBERON:0000073!4.12e-21!75;UBERON:0001016!4.12e-21!75;UBERON:0004121!1.12e-18!102;UBERON:0000924!1.12e-18!102;UBERON:0006601!1.12e-18!102;UBERON:0002020!3.49e-16!34;UBERON:0002346!6.81e-16!71;UBERON:0003075!6.81e-16!71;UBERON:0007284!6.81e-16!71;UBERON:0001049!7.74e-15!52;UBERON:0005068!7.74e-15!52;UBERON:0006241!7.74e-15!52;UBERON:0007135!7.74e-15!52;UBERON:0002791!2.82e-12!29;UBERON:0003528!2.82e-12!29;UBERON:0001893!2.82e-12!29;UBERON:0000955!3.81e-12!50;UBERON:0006238!3.81e-12!50;UBERON:0002616!1.56e-11!49;UBERON:0003056!2.02e-11!49;UBERON:0000033!2.58e-11!63;UBERON:0003080!1.01e-10!40;UBERON:0002780!1.92e-10!39;UBERON:0001890!1.92e-10!39;UBERON:0006240!1.92e-10!39;UBERON:0000956!8.81e-08!21;UBERON:0001869!8.81e-08!21;UBERON:0000203!8.81e-08!21;UBERON:0007811!2.22e-07!86 | |ontology_enrichment_uberon=UBERON:0001017!2.70e-21!73;UBERON:0005743!2.70e-21!73;UBERON:0000073!4.12e-21!75;UBERON:0001016!4.12e-21!75;UBERON:0004121!1.12e-18!102;UBERON:0000924!1.12e-18!102;UBERON:0006601!1.12e-18!102;UBERON:0002020!3.49e-16!34;UBERON:0002346!6.81e-16!71;UBERON:0003075!6.81e-16!71;UBERON:0007284!6.81e-16!71;UBERON:0001049!7.74e-15!52;UBERON:0005068!7.74e-15!52;UBERON:0006241!7.74e-15!52;UBERON:0007135!7.74e-15!52;UBERON:0002791!2.82e-12!29;UBERON:0003528!2.82e-12!29;UBERON:0001893!2.82e-12!29;UBERON:0000955!3.81e-12!50;UBERON:0006238!3.81e-12!50;UBERON:0002616!1.56e-11!49;UBERON:0003056!2.02e-11!49;UBERON:0000033!2.58e-11!63;UBERON:0003080!1.01e-10!40;UBERON:0002780!1.92e-10!39;UBERON:0001890!1.92e-10!39;UBERON:0006240!1.92e-10!39;UBERON:0000956!8.81e-08!21;UBERON:0001869!8.81e-08!21;UBERON:0000203!8.81e-08!21;UBERON:0007811!2.22e-07!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.75e-16,34;UBERON:0001017,2.42e-14,73;UBERON:0001016,6.94e-14,75;UBERON:0003528,3.36e-13,29;UBERON:0002791,3.36e-13,29;UBERON:0001893,3.36e-13,29;UBERON:0001049,7.73e-12,52;UBERON:0005068,7.73e-12,52;UBERON:0006241,7.73e-12,52;UBERON:0007135,7.73e-12,52;UBERON:0000073,2.56e-11,54;UBERON:0004121,2.33e-10,95;UBERON:0000924,2.33e-10,95;UBERON:0006601,2.33e-10,95;UBERON:0002616,1.45e-09,46;UBERON:0002780,2.04e-09,39;UBERON:0001890,2.04e-09,39;UBERON:0006240,2.04e-09,39;UBERON:0000955,2.53e-09,47;UBERON:0006238,2.53e-09,47;UBERON:0002346,3.35e-09,64;UBERON:0003075,3.35e-09,64;UBERON:0007284,3.35e-09,64;UBERON:0000956,3.51e-09,21;UBERON:0001869,3.51e-09,21;UBERON:0000203,3.51e-09,21;UBERON:0003080,3.84e-09,40;UBERON:0002619,1.64e-08,17;UBERON:0000369,2.47e-08,5;UBERON:0002435,2.47e-08,5;UBERON:0000204,2.47e-08,5;UBERON:0010082,2.47e-08,5;UBERON:0010371,8.60e-08,73;UBERON:0003056,3.54e-07,49;UBERON:0002021,6.67e-07,10;UBERON:0000411,6.67e-07,10;UBERON:0001950,6.67e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,2.11596391708813,1.26766280701236,0,0,0,0,0,0.898800331555214,0.768436610643109,0.725827286159344,1.75507719831198,0.210324961351382,0.856952953211411,1.10434270475807,0.244981598429908,1.15014565221884,1.83843757322004,0,0.383062014255563,0.768032666281217,1.05509030184155,2.74462930807229,1.56274011167028,0.837548997004143,0.56276261003168,0.45839474333043,0.589257170947335,2.42031857358475,0.559198337475902,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0.608930956624282,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0.220841518460394,0,0,0,3.77004072264219,0,0,0,0,0.149790639404823,0,0.879580464790051,0,1.02286182932132,0.20778804455956,0.324482526135515,0,0,0,0,0.260240885925407,0,0.180062129805349,0.150704817835715,0.204109497453984,0.12811372028485,0.187403449119458,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0.720332286654991,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0.234423373184406,0,0.252470927204373,0.315508219416257,0,0.646270193198397,0,0,0.566153061577665,0.809621403349789,0.584511715822624,1.18586333383957,0.642642632843614,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.329098041204242,0,0.23467170806371,0,0,0,0.161464426695906,0,0,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0.25984164595559,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,2.25900737046827,0.460325236507177,1.71868654031819,1.03111909406213,0,0.755393897389701,0,0.45032120322422,0.906284817968409,1.03552062350364,0,0.798049746802062,0.170733605754134,0,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0,0.50695859978048,0.188626341386076,0,0.128050304809739,0.17230640686684,0,0,0,0,0.147198920134397,0,0.354951612318675,0.476872379894642,0.145346416632329,0.188218760830661,0.338458431566706,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0.818462086339379,0,0.192906610981141,0.249810577937946,0.467863216890817,0.644613162144895,1.53030665655075,0.220591419119515,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,2.11596391708813,1.26766280701236,0,0,0,0,0,0.898800331555214,0.768436610643109,0.725827286159344,1.75507719831198,0.210324961351382,0.856952953211411,1.10434270475807,0.244981598429908,1.15014565221884,1.83843757322004,0,0.383062014255563,0.768032666281217,1.05509030184155,2.74462930807229,1.56274011167028,0.837548997004143,0.56276261003168,0.45839474333043,0.589257170947335,2.42031857358475,0.559198337475902,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0.608930956624282,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0.220841518460394,0,0,0,3.77004072264219,0,0,0,0,0.149790639404823,0,0.879580464790051,0,1.02286182932132,0.20778804455956,0.324482526135515,0,0,0,0,0.260240885925407,0,0.180062129805349,0.150704817835715,0.204109497453984,0.12811372028485,0.187403449119458,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0.720332286654991,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0.234423373184406,0,0.252470927204373,0.315508219416257,0,0.646270193198397,0,0,0.566153061577665,0.809621403349789,0.584511715822624,1.18586333383957,0.642642632843614,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.329098041204242,0,0.23467170806371,0,0,0,0.161464426695906,0,0,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0.25984164595559,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,2.25900737046827,0.460325236507177,1.71868654031819,1.03111909406213,0,0.755393897389701,0,0.45032120322422,0.906284817968409,1.03552062350364,0,0.798049746802062,0.170733605754134,0,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0,0.50695859978048,0.188626341386076,0,0.128050304809739,0.17230640686684,0,0,0,0,0.147198920134397,0,0.354951612318675,0.476872379894642,0.145346416632329,0.188218760830661,0.338458431566706,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0.818462086339379,0,0.192906610981141,0.249810577937946,0.467863216890817,0.644613162144895,1.53030665655075,0.220591419119515,0 | ||
|short_description=p@chr3:95023823..95023839,- | |short_description=p@chr3:95023823..95023839,- | ||
}} | }} |
Latest revision as of 07:58, 4 August 2015
Short description: | p@chr3:95023823..95023839, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:95023823..95023839, - |
Coexpression cluster: | MCL_coexpression_mm9:596 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.54e-21 | 23 |
neuroblast (sensu Vertebrata) | 4.54e-21 | 23 |
neuron | 6.75e-17 | 33 |
neuronal stem cell | 6.75e-17 | 33 |
neuroblast | 6.75e-17 | 33 |
electrically signaling cell | 6.75e-17 | 33 |
electrically responsive cell | 5.44e-14 | 39 |
electrically active cell | 5.44e-14 | 39 |
granule cell | 8.90e-14 | 3 |
striatum neuron | 1.45e-13 | 3 |
neural cell | 1.67e-12 | 43 |
ectodermal cell | 3.58e-12 | 44 |
neurectodermal cell | 3.58e-12 | 44 |
neuron of cerebral cortex | 4.89e-07 | 6 |
embryonic cell | 6.71e-07 | 70 |