FFCP PHASE1:Hg19::chr2:236402541..236402550,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:236402541..236402550,+
|short_description=p9@AGAP1
|description=CAGE_peak_9_at_AGAP1_5end
|association_with_transcript=-182bp_to_ENST00000409457,NM_0010371...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=116987 | |EntrezGene=116987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16922 | |HGNC=16922 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UPQ3 | |UniProt=Q9UPQ3 | ||
|association_with_transcript=-182bp_to_ENST00000409457,NM_001037131,NM_001244888,NM_014914_5end | |||
|cluster_id=chr2:236402541..236402550,+ | |||
|description=CAGE_peak_9_at_AGAP1_5end | |||
|id=chr2:236402541..236402550,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.09e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3193;5.71e-09;2!DOID:962;5.71e-09;2!DOID:3307;5.71e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,3.71e-09,2;DOID:3193,6.94e-09,2;DOID:962,6.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.02e-20!82;UBERON:0001869!1.74e-20!32;UBERON:0001950!2.63e-20!20;UBERON:0002619!3.09e-20!22;UBERON:0001893!3.61e-20!34;UBERON:0005743!7.70e-20!86;UBERON:0001049!1.21e-19!57;UBERON:0005068!1.21e-19!57;UBERON:0006241!1.21e-19!57;UBERON:0007135!1.21e-19!57;UBERON:0000955!1.34e-19!69;UBERON:0006238!1.34e-19!69;UBERON:0000073!3.27e-19!94;UBERON:0001016!3.27e-19!94;UBERON:0002791!4.75e-19!33;UBERON:0002020!1.52e-18!34;UBERON:0003528!1.52e-18!34;UBERON:0007023!3.80e-18!115;UBERON:0002616!4.28e-18!59;UBERON:0002780!1.35e-17!41;UBERON:0001890!1.35e-17!41;UBERON:0006240!1.35e-17!41;UBERON:0000956!5.32e-17!25;UBERON:0000203!5.32e-17!25;UBERON:0003080!6.03e-17!42;UBERON:0002346!6.15e-16!90;UBERON:0003075!2.23e-15!86;UBERON:0007284!2.23e-15!86;UBERON:0000033!8.02e-12!123;UBERON:0003056!3.55e-11!61;UBERON:0000924!5.60e-11!173;UBERON:0006601!5.60e-11!173;UBERON:0000153!1.41e-10!129;UBERON:0007811!1.41e-10!129;UBERON:0004121!1.88e-10!169;UBERON:0000200!1.73e-08!6;UBERON:0001871!6.45e-08!7;UBERON:0002021!2.51e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.19e-42;22!UBERON:0000956;6.74e-37;25!UBERON:0000203;6.74e-37;25!UBERON:0001950;3.69e-35;20!UBERON:0001869;2.24e-31;32!UBERON:0001893;1.22e-30;34!UBERON:0002791;1.44e-25;32!UBERON:0003528;2.38e-23;34!UBERON:0002020;2.38e-23;34!UBERON:0002780;1.27e-21;41!UBERON:0001890;1.27e-21;41!UBERON:0002581;1.31e-16;1!UBERON:0002902;1.31e-16;1!UBERON:0002022;1.31e-16;1!UBERON:0003112;1.31e-16;1!UBERON:0011158;1.31e-16;1!UBERON:0009899;1.31e-16;1!UBERON:0007190;1.31e-16;1!UBERON:0003128;1.31e-16;1!UBERON:0001703;1.31e-16;1!UBERON:0002241;1.31e-16;1!UBERON:0000349;2.30e-13;5!UBERON:0000073;2.79e-13;53!UBERON:0002616;2.79e-13;53!UBERON:0001872;3.43e-13;5!UBERON:0002021;3.43e-13;5!UBERON:0000200;3.75e-11;6!UBERON:0001871;8.16e-10;6!UBERON:0001876;3.43e-09;2!UBERON:0001954;5.71e-09;2!UBERON:0003714;5.71e-09;2!UBERON:0003022;5.71e-09;2!UBERON:0002421;5.71e-09;2!UBERON:0002600;5.71e-09;2!UBERON:0000955;1.45e-08;68!UBERON:0001016;4.48e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,8.08e-42,22;UBERON:0000956,6.01e-37,25;UBERON:0000203,6.01e-37,25;UBERON:0001869,1.08e-36,32;UBERON:0001950,2.72e-35,20;UBERON:0001893,1.45e-34,34;UBERON:0002791,5.12e-29,32;UBERON:0002780,1.06e-28,41;UBERON:0001890,1.06e-28,41;UBERON:0003080,1.06e-28,41;UBERON:0006240,1.06e-28,41;UBERON:0003528,2.48e-27,34;UBERON:0002020,2.48e-27,34;UBERON:0000073,3.53e-22,53;UBERON:0002616,3.53e-22,53;UBERON:0001049,5.65e-21,56;UBERON:0005068,5.65e-21,56;UBERON:0006241,5.65e-21,56;UBERON:0007135,5.65e-21,56;UBERON:0003056,3.16e-19,61;UBERON:0000955,6.04e-17,68;UBERON:0006238,6.04e-17,68;UBERON:0002902,6.47e-17,1;UBERON:0009899,6.47e-17,1;UBERON:0002022,7.57e-17,1;UBERON:0007190,1.04e-16,1;UBERON:0002581,1.41e-16,1;UBERON:0003112,1.65e-16,1;UBERON:0011158,1.65e-16,1;UBERON:0003128,1.65e-16,1;UBERON:0001703,1.65e-16,1;UBERON:0002241,1.65e-16,1;UBERON:0004761,1.65e-16,1;UBERON:0009617,1.65e-16,1;UBERON:0001016,1.02e-15,89;UBERON:0001017,3.58e-14,81;UBERON:0003075,3.58e-14,82;UBERON:0007284,3.58e-14,82;UBERON:0002346,1.75e-13,86;UBERON:0002021,2.52e-13,5;UBERON:0000349,2.85e-13,5;UBERON:0001872,4.66e-13,5;UBERON:0007023,1.63e-12,114;UBERON:0000200,3.57e-11,6;UBERON:0010371,4.93e-11,104;UBERON:0010314,1.38e-10,132;UBERON:0001871,7.31e-10,6;UBERON:0001876,3.43e-09,2;UBERON:0005253,6.42e-09,2;UBERON:0003714,6.94e-09,2;UBERON:0001954,7.49e-09,2;UBERON:0003022,7.49e-09,2;UBERON:0002421,7.49e-09,2;UBERON:0002600,7.49e-09,2;UBERON:0004121,7.56e-08,171;UBERON:0000924,7.56e-08,171;UBERON:0006601,7.56e-08,171;UBERON:0011216,4.35e-07,223 | |||
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| ||
|short_description=p9@AGAP1 | |||
}} | }} |
Latest revision as of 01:48, 16 September 2015
Short description: | p9@AGAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_AGAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -182bp_to_ENST00000409457, NM_001037131, NM_001244888, NM_014914_5end |
EntrezGene: | AGAP1 |
HGNC: | 16922 |
UniProt: | Q9UPQ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
teratoma | 3.71e-09 | 2 |
peripheral nerve sheath neoplasm | 6.94e-09 | 2 |
neurofibroma | 6.94e-09 | 2 |