FFCP PHASE1:Mm9::chr19:6996294..6996324,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=26379 | |EntrezGene=26379 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |MCL_coexpression_id=24 | ||
|TSSclassifier=NA | |||
|UniProt=O08580 | |UniProt=O08580 | ||
|association_with_transcript=0bp_to_ENSMUST00000025906,ENSMUST00000173308,NM_007953,uc008gjg.1,uc008gjh.1_5end | |association_with_transcript=0bp_to_ENSMUST00000025906,ENSMUST00000173308,NM_007953,uc008gjg.1,uc008gjh.1_5end | ||
|cluster_id=chr19:6996294..6996324,- | |||
|description=CAGE_peak_2_at_Esrra_5end | |description=CAGE_peak_2_at_Esrra_5end | ||
|id=chr19:6996294..6996324,- | |id=chr19:6996294..6996324,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.47e-08!15;UBERON:0000955!1.04e-07!50;UBERON:0006238!1.04e-07!50;UBERON:0001017!1.29e-07!73;UBERON:0005743!1.29e-07!73;UBERON:0000073!2.04e-07!75;UBERON:0001016!2.04e-07!75;UBERON:0002616!2.25e-07!49;UBERON:0002020!2.37e-07!34;UBERON:0001049!3.00e-07!52;UBERON:0005068!3.00e-07!52;UBERON:0006241!3.00e-07!52;UBERON:0007135!3.00e-07!52;UBERON:0001242!6.30e-07!13;UBERON:0000060!6.30e-07!13;UBERON:0001262!6.30e-07!13;UBERON:0004786!6.30e-07!13 | |ontology_enrichment_uberon=UBERON:0000344!5.47e-08!15;UBERON:0000955!1.04e-07!50;UBERON:0006238!1.04e-07!50;UBERON:0001017!1.29e-07!73;UBERON:0005743!1.29e-07!73;UBERON:0000073!2.04e-07!75;UBERON:0001016!2.04e-07!75;UBERON:0002616!2.25e-07!49;UBERON:0002020!2.37e-07!34;UBERON:0001049!3.00e-07!52;UBERON:0005068!3.00e-07!52;UBERON:0006241!3.00e-07!52;UBERON:0007135!3.00e-07!52;UBERON:0001242!6.30e-07!13;UBERON:0000060!6.30e-07!13;UBERON:0001262!6.30e-07!13;UBERON:0004786!6.30e-07!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.38e-10,31;UBERON:0000073,2.51e-08,54;UBERON:0000344,5.47e-08,15;UBERON:0001017,1.29e-07,73;UBERON:0001016,2.04e-07,75;UBERON:0002020,2.37e-07,34;UBERON:0001049,3.00e-07,52;UBERON:0005068,3.00e-07,52;UBERON:0006241,3.00e-07,52;UBERON:0007135,3.00e-07,52;UBERON:0001242,6.30e-07,13;UBERON:0001262,6.30e-07,13;UBERON:0004786,6.30e-07,13 | |||
|phase1_expression=5.44506080156299,67.0032782667573,72.3448790629362,86.8072286450602,94.6692929598596,20.3133919013387,20.5579123724063,2.84071311571468,2.25261955442667,3.27690336850791,2.39705155515707,3.03134204182278,2.22560948910567,2.88487327982691,2.6648780945253,2.02475267389826,2.09868563438444,6.78243655520211,6.44437837946972,7.63901373236454,6.12311689087702,2.18440092641948,2.61199789138935,18.5591210440352,20.8762445771125,53.9778046268119,35.3224836850441,34.0444547643705,34.2042155021473,36.29233868543,21.9513205548752,7.62036808151557,3.07532393792285,0,6.06588401477677,5.98444723290572,6.12508068787107,10.0447591376858,6.2506827561904,7.32933241563318,10.5881667845583,8.19654581950135,8.73918635456076,3.27331726736501,3.75094645512204,1.65192076945513,8.60630478782843,8.93903141159831,8.5677611266444,11.2769341463084,8.11921245427103,12.9377307928474,6.04017381807851,5.07753499407941,1.68046899571232,6.17422646486273,6.87680255853016,8.76642556871652,7.68802551266472,8.46385566835253,6.97214543856797,10.5041804941431,9.78224275722253,16.6481447697059,31.6437236021432,29.1296847127901,13.7816050838466,15.3687322128622,7.67303131082735,9.18040380655497,6.94072372459561,10.2834354385369,11.4851641294839,7.83941114975706,6.99671938433125,11.0306254393203,31.9336054898227,22.472971502993,20.2760623898241,5.80299666012853,3.84248103130121,4.16730696445408,18.4260779340911,16.3201156909187,12.3766580699216,9.1334861496837,8.39992916714707,4.84638559145781,5.30083353332288,4.1564358058732,2.02905142091174,4.30211938490693,2.719885334831,5.93673510801599,7.79731700937203,9.85659151614138,9.12888730856387,3.74946709671727,4.1565760736459,4.59341446863442,5.49289337129054,2.56652954828636,10.1922095882658,7.11066703153331,7.79367747640371,7.85415582972806,7.58286667522175,8.10705546005326,2.07150306917737,4.15637989381509,1.73485326766136,2.74018930480927,4.61230994512117,5.57673770044703,3.17489509266403,5.90632979249475,5.19109432242185,9.68815691363408,1.76922110389975,4.36770494858005,6.40440403535141,5.81850303762267,1.86391761218122,10.5401086924157,17.1746299587033,18.6483650302272,1.1981512450592,1.19980546198682,1.14363204365758,8.68785708547972,10.0650132620098,4.90051973240171,10.4294592115366,8.18289463457058,6.2336413367868,10.707923362472,2.54598409625791,4.85187185379363,4.54900965180614,9.89076722666428,2.47228841629137,2.5289231487682,1.62055916824814,2.86339153887859,3.33378845841506,1.5373646434182,4.8724896771059,4.13925393182425,0.646703978798527,1.13463648100692,1.40760899331159,1.31517439456545,2.50242524303038,1.39300866608867,3.90986059175093,2.18937693500343,0,1.80143534980301,1.98914449576915,3.10688658803253,4.22146907965973,3.6012412292203,4.02466050494857,7.47704080640135,6.63348585415727,7.20855228726264,9.65784245038629,7.94004328096752,8.88623189532794,8.70087559619205,10.2957388123237,14.6199987425332,10.0993053033883,10.7365135008297,6.9395683026162,4.11618449517138,33.0418782983798,12.4291766331866,1.70630600428187,3.71578674976702,3.99489130098489,6.6555563125703,8.89512175379481,12.5548913234289,29.8953308773042,18.2815839743652,24.8821856712267,28.0528625578023,23.0057622800562,21.5716658077013,18.5878722892237,21.5072575114717,2.0863469104839,2.51346727741403,3.38123207019241,5.29493452397817,3.68509725618489,5.40045813155453,5.75452487830741,10.9231509504906,9.41992367048249,13.5736880313981,7.70776830426587,2.00214126859313,1.57247196090562,2.02375901146368,1.42002084971952,2.17059443777175,3.05551022137704,2.5892652370573,14.1057647294281,3.0201755450689,2.87536413054709,4.46569137202204,2.80833905803104,4.79899868099512,4.84373016509163,8.20153986317724,3.51031061316549,1.51593129416388,1.30371981153621,0.848725428875941,2.34690248288502,2.01007508930179,3.57065461329021,2.73187107000918,3.4679731703362,2.6575762757853,4.62418829106713,4.09658286789345,6.04397436530635,5.78596234326046,10.5553898757491,8.15858525728064,4.91764273019036,3.31124095565679,13.3256989689867,8.67366480782304,1.3114795630134,11.3611917241968,1.89304931649754,1.56175497718655,3.01592756825919,3.82350076724083,2.89638276307112,3.96307143104365,3.64329631507405,4.38383786866968,3.16230222357219,11.2462460747632,2.2710413633323,4.62970569534864,2.28041743095006,3.13443233647817,0,1.45668381692989,2.72091201268276,3.01768127609437,1.77181135728464,1.84461088766356,6.97756391554197,2.54473610634254,2.85197902707777,3.79244109522979,5.27093042874994,5.15677716240934,3.74483566329167,3.06103859853227,5.56242340265844,2.35770738534752,3.72414490648775,3.56737635204141,2.96188237083818,3.34911444026059,3.28540391289194,6.35496212591461,5.29268155331909,3.79238381765404,3.22928853391811,2.95533332147964,5.01363844813173,6.23735419031233,21.2781010739791,9.27126510052548,1.19609616558497,2.68302928352189,2.40752885580625,1.50694765603753,1.77702496037333,2.97411625168479,0.339956859987711,0.559805809294632,0.967399816630967,7.63736494412091,2.05618395827738,2.84647253977588,3.67218158794124,2.50905955217362,4.58561383866973,4.18079473792944,5.62043498932284,9.16145796944104,23.0714652459391,8.69875038321696,0.56369293868419,1.64468200648377,1.48912641411388,2.72231663681667,1.80823752868824,1.35164900392623,1.87771581833206,2.8644964665669,2.41176492179135,2.89900944991207,2.01621004380506,1.89606672376907,3.24360344464263,3.18403967210964,1.42912905275575,3.22248052201467,2.38417625737518,2.88469078847925,3.39685912501528,2.92802704849628,3.50551310612999,3.12561173924206,3.60594158737084,3.36741445741153,4.44132228289962,7.9355634265324,5.77163478772568,7.62567781180543,6.04384618910682,5.02292944483695,6.56888664079137,6.22715522508701,6.43105137237198,4.51414893631827,12.9892923801925,8.28585425712918,14.3223878359849,9.28007184655913,5.48066015816514,13.5970901530146,9.45031500324528,13.0593148935024,14.0474146785103,14.497288729051,1.55681021376265,3.99024873401031,4.60980735536162,1.94485373654635,5.65955539095552,5.69914876195044,7.3341420174533,4.94484137373346,7.06022261101994,4.04315538822076,3.8021894983536,7.9223063382152,6.46126401542189,5.69823856403337,7.00712721258482,10.0021675169445,6.60540657885676,8.48800570040302,6.59337441285291,6.47675248591348,8.22886205724997,6.03417740941747,7.39152188836695,5.37781741539616,6.49354724865781,8.12300235760094,5.12198324043763,7.3659519202596,8.82726739998101,3.92799590160417,5.21994079746366,7.97886307242064,8.59385190656348,7.43696837692637,6.94463799532109,6.74488560432454,5.14649538579898,4.72716318906256,5.16478496585877,6.61774257358547,5.56482805489012 | |phase1_expression=5.44506080156299,67.0032782667573,72.3448790629362,86.8072286450602,94.6692929598596,20.3133919013387,20.5579123724063,2.84071311571468,2.25261955442667,3.27690336850791,2.39705155515707,3.03134204182278,2.22560948910567,2.88487327982691,2.6648780945253,2.02475267389826,2.09868563438444,6.78243655520211,6.44437837946972,7.63901373236454,6.12311689087702,2.18440092641948,2.61199789138935,18.5591210440352,20.8762445771125,53.9778046268119,35.3224836850441,34.0444547643705,34.2042155021473,36.29233868543,21.9513205548752,7.62036808151557,3.07532393792285,0,6.06588401477677,5.98444723290572,6.12508068787107,10.0447591376858,6.2506827561904,7.32933241563318,10.5881667845583,8.19654581950135,8.73918635456076,3.27331726736501,3.75094645512204,1.65192076945513,8.60630478782843,8.93903141159831,8.5677611266444,11.2769341463084,8.11921245427103,12.9377307928474,6.04017381807851,5.07753499407941,1.68046899571232,6.17422646486273,6.87680255853016,8.76642556871652,7.68802551266472,8.46385566835253,6.97214543856797,10.5041804941431,9.78224275722253,16.6481447697059,31.6437236021432,29.1296847127901,13.7816050838466,15.3687322128622,7.67303131082735,9.18040380655497,6.94072372459561,10.2834354385369,11.4851641294839,7.83941114975706,6.99671938433125,11.0306254393203,31.9336054898227,22.472971502993,20.2760623898241,5.80299666012853,3.84248103130121,4.16730696445408,18.4260779340911,16.3201156909187,12.3766580699216,9.1334861496837,8.39992916714707,4.84638559145781,5.30083353332288,4.1564358058732,2.02905142091174,4.30211938490693,2.719885334831,5.93673510801599,7.79731700937203,9.85659151614138,9.12888730856387,3.74946709671727,4.1565760736459,4.59341446863442,5.49289337129054,2.56652954828636,10.1922095882658,7.11066703153331,7.79367747640371,7.85415582972806,7.58286667522175,8.10705546005326,2.07150306917737,4.15637989381509,1.73485326766136,2.74018930480927,4.61230994512117,5.57673770044703,3.17489509266403,5.90632979249475,5.19109432242185,9.68815691363408,1.76922110389975,4.36770494858005,6.40440403535141,5.81850303762267,1.86391761218122,10.5401086924157,17.1746299587033,18.6483650302272,1.1981512450592,1.19980546198682,1.14363204365758,8.68785708547972,10.0650132620098,4.90051973240171,10.4294592115366,8.18289463457058,6.2336413367868,10.707923362472,2.54598409625791,4.85187185379363,4.54900965180614,9.89076722666428,2.47228841629137,2.5289231487682,1.62055916824814,2.86339153887859,3.33378845841506,1.5373646434182,4.8724896771059,4.13925393182425,0.646703978798527,1.13463648100692,1.40760899331159,1.31517439456545,2.50242524303038,1.39300866608867,3.90986059175093,2.18937693500343,0,1.80143534980301,1.98914449576915,3.10688658803253,4.22146907965973,3.6012412292203,4.02466050494857,7.47704080640135,6.63348585415727,7.20855228726264,9.65784245038629,7.94004328096752,8.88623189532794,8.70087559619205,10.2957388123237,14.6199987425332,10.0993053033883,10.7365135008297,6.9395683026162,4.11618449517138,33.0418782983798,12.4291766331866,1.70630600428187,3.71578674976702,3.99489130098489,6.6555563125703,8.89512175379481,12.5548913234289,29.8953308773042,18.2815839743652,24.8821856712267,28.0528625578023,23.0057622800562,21.5716658077013,18.5878722892237,21.5072575114717,2.0863469104839,2.51346727741403,3.38123207019241,5.29493452397817,3.68509725618489,5.40045813155453,5.75452487830741,10.9231509504906,9.41992367048249,13.5736880313981,7.70776830426587,2.00214126859313,1.57247196090562,2.02375901146368,1.42002084971952,2.17059443777175,3.05551022137704,2.5892652370573,14.1057647294281,3.0201755450689,2.87536413054709,4.46569137202204,2.80833905803104,4.79899868099512,4.84373016509163,8.20153986317724,3.51031061316549,1.51593129416388,1.30371981153621,0.848725428875941,2.34690248288502,2.01007508930179,3.57065461329021,2.73187107000918,3.4679731703362,2.6575762757853,4.62418829106713,4.09658286789345,6.04397436530635,5.78596234326046,10.5553898757491,8.15858525728064,4.91764273019036,3.31124095565679,13.3256989689867,8.67366480782304,1.3114795630134,11.3611917241968,1.89304931649754,1.56175497718655,3.01592756825919,3.82350076724083,2.89638276307112,3.96307143104365,3.64329631507405,4.38383786866968,3.16230222357219,11.2462460747632,2.2710413633323,4.62970569534864,2.28041743095006,3.13443233647817,0,1.45668381692989,2.72091201268276,3.01768127609437,1.77181135728464,1.84461088766356,6.97756391554197,2.54473610634254,2.85197902707777,3.79244109522979,5.27093042874994,5.15677716240934,3.74483566329167,3.06103859853227,5.56242340265844,2.35770738534752,3.72414490648775,3.56737635204141,2.96188237083818,3.34911444026059,3.28540391289194,6.35496212591461,5.29268155331909,3.79238381765404,3.22928853391811,2.95533332147964,5.01363844813173,6.23735419031233,21.2781010739791,9.27126510052548,1.19609616558497,2.68302928352189,2.40752885580625,1.50694765603753,1.77702496037333,2.97411625168479,0.339956859987711,0.559805809294632,0.967399816630967,7.63736494412091,2.05618395827738,2.84647253977588,3.67218158794124,2.50905955217362,4.58561383866973,4.18079473792944,5.62043498932284,9.16145796944104,23.0714652459391,8.69875038321696,0.56369293868419,1.64468200648377,1.48912641411388,2.72231663681667,1.80823752868824,1.35164900392623,1.87771581833206,2.8644964665669,2.41176492179135,2.89900944991207,2.01621004380506,1.89606672376907,3.24360344464263,3.18403967210964,1.42912905275575,3.22248052201467,2.38417625737518,2.88469078847925,3.39685912501528,2.92802704849628,3.50551310612999,3.12561173924206,3.60594158737084,3.36741445741153,4.44132228289962,7.9355634265324,5.77163478772568,7.62567781180543,6.04384618910682,5.02292944483695,6.56888664079137,6.22715522508701,6.43105137237198,4.51414893631827,12.9892923801925,8.28585425712918,14.3223878359849,9.28007184655913,5.48066015816514,13.5970901530146,9.45031500324528,13.0593148935024,14.0474146785103,14.497288729051,1.55681021376265,3.99024873401031,4.60980735536162,1.94485373654635,5.65955539095552,5.69914876195044,7.3341420174533,4.94484137373346,7.06022261101994,4.04315538822076,3.8021894983536,7.9223063382152,6.46126401542189,5.69823856403337,7.00712721258482,10.0021675169445,6.60540657885676,8.48800570040302,6.59337441285291,6.47675248591348,8.22886205724997,6.03417740941747,7.39152188836695,5.37781741539616,6.49354724865781,8.12300235760094,5.12198324043763,7.3659519202596,8.82726739998101,3.92799590160417,5.21994079746366,7.97886307242064,8.59385190656348,7.43696837692637,6.94463799532109,6.74488560432454,5.14649538579898,4.72716318906256,5.16478496585877,6.61774257358547,5.56482805489012 | ||
|short_description=p2@Esrra | |short_description=p2@Esrra | ||
}} | }} |
Latest revision as of 03:25, 26 September 2015
Short description: | p2@Esrra |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Esrra_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000025906, ENSMUST00000173308, NM_007953, uc008gjg.1, uc008gjh.1_5end |
EntrezGene: | Esrra |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 3.38e-10 | 31 |
regional part of nervous system | 2.51e-08 | 54 |
mucosa | 5.47e-08 | 15 |
central nervous system | 1.29e-07 | 73 |
nervous system | 2.04e-07 | 75 |
gray matter | 2.37e-07 | 34 |
neural tube | 3.00e-07 | 52 |
neural rod | 3.00e-07 | 52 |
future spinal cord | 3.00e-07 | 52 |
neural keel | 3.00e-07 | 52 |
intestinal mucosa | 6.30e-07 | 13 |
wall of intestine | 6.30e-07 | 13 |
gastrointestinal system mucosa | 6.30e-07 | 13 |