FFCP PHASE1:Mm9::chr4:102887752..102887806,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=242585 | |EntrezGene=242585 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1309 | |MCL_coexpression_id=1309 | ||
|TSSclassifier=NA | |||
|UniProt=Q8BX24 | |UniProt=Q8BX24 | ||
|association_with_transcript=0bp_to_ENSMUST00000150285_5end | |association_with_transcript=0bp_to_ENSMUST00000150285_5end | ||
|cluster_id=chr4:102887752..102887806,- | |||
|description=CAGE_peak_1_at_Slc35d1_5end | |description=CAGE_peak_1_at_Slc35d1_5end | ||
|id=chr4:102887752..102887806,- | |id=chr4:102887752..102887806,- | ||
|ontology_enrichment_celltype=CL:0000066!8.54e-08!25;CL:0000223!4.47e-07!20 | |ontology_enrichment_celltype=CL:0000066!8.54e-08!25;CL:0000223!4.47e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.44e-08,25;CL:0000223,4.42e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.02e-14!59;UBERON:0000160!1.95e-13!43;UBERON:0009854!2.76e-12!23;UBERON:0009856!2.76e-12!23;UBERON:0001007!1.33e-11!128;UBERON:0001555!1.33e-11!128;UBERON:0007026!1.33e-11!128;UBERON:0002107!1.35e-11!22;UBERON:0007499!1.35e-11!22;UBERON:0006925!1.35e-11!22;UBERON:0009497!1.35e-11!22;UBERON:0000015!1.35e-11!22;UBERON:0002423!1.35e-11!22;UBERON:0006235!1.35e-11!22;UBERON:0008835!1.35e-11!22;UBERON:0003894!1.35e-11!22;UBERON:0004161!1.35e-11!22;UBERON:0008836!1.35e-11!22;UBERON:0004119!1.48e-11!130;UBERON:0000925!1.48e-11!130;UBERON:0006595!1.48e-11!130;UBERON:0004921!8.03e-11!126;UBERON:0004185!8.03e-11!126;UBERON:0005172!7.45e-10!49;UBERON:0005173!7.45e-10!49;UBERON:0002417!7.45e-10!49;UBERON:0000916!7.45e-10!49;UBERON:0005177!1.29e-09!85;UBERON:0002365!1.33e-09!25;UBERON:0002330!1.33e-09!25;UBERON:0002100!6.23e-08!98;UBERON:0009569!7.43e-08!66;UBERON:0005256!1.47e-07!47;UBERON:0000344!2.15e-07!15 | |ontology_enrichment_uberon=UBERON:0005409!5.02e-14!59;UBERON:0000160!1.95e-13!43;UBERON:0009854!2.76e-12!23;UBERON:0009856!2.76e-12!23;UBERON:0001007!1.33e-11!128;UBERON:0001555!1.33e-11!128;UBERON:0007026!1.33e-11!128;UBERON:0002107!1.35e-11!22;UBERON:0007499!1.35e-11!22;UBERON:0006925!1.35e-11!22;UBERON:0009497!1.35e-11!22;UBERON:0000015!1.35e-11!22;UBERON:0002423!1.35e-11!22;UBERON:0006235!1.35e-11!22;UBERON:0008835!1.35e-11!22;UBERON:0003894!1.35e-11!22;UBERON:0004161!1.35e-11!22;UBERON:0008836!1.35e-11!22;UBERON:0004119!1.48e-11!130;UBERON:0000925!1.48e-11!130;UBERON:0006595!1.48e-11!130;UBERON:0004921!8.03e-11!126;UBERON:0004185!8.03e-11!126;UBERON:0005172!7.45e-10!49;UBERON:0005173!7.45e-10!49;UBERON:0002417!7.45e-10!49;UBERON:0000916!7.45e-10!49;UBERON:0005177!1.29e-09!85;UBERON:0002365!1.33e-09!25;UBERON:0002330!1.33e-09!25;UBERON:0002100!6.23e-08!98;UBERON:0009569!7.43e-08!66;UBERON:0005256!1.47e-07!47;UBERON:0000344!2.15e-07!15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,2.71e-12,23;UBERON:0009856,2.71e-12,23;UBERON:0002107,1.33e-11,22;UBERON:0007499,1.33e-11,22;UBERON:0006925,1.33e-11,22;UBERON:0009497,1.33e-11,22;UBERON:0000015,1.33e-11,22;UBERON:0002423,1.33e-11,22;UBERON:0006235,1.33e-11,22;UBERON:0008835,1.33e-11,22;UBERON:0003894,1.33e-11,22;UBERON:0004161,1.33e-11,22;UBERON:0008836,1.33e-11,22;UBERON:0005409,1.68e-11,47;UBERON:0000160,3.33e-11,31;UBERON:0005177,1.66e-10,79;UBERON:0005172,7.34e-10,49;UBERON:0005173,7.34e-10,49;UBERON:0002417,7.34e-10,49;UBERON:0000916,7.34e-10,49;UBERON:0002365,1.31e-09,25;UBERON:0002330,1.31e-09,25;UBERON:0002100,6.70e-09,90;UBERON:0001007,7.04e-09,116;UBERON:0001555,7.04e-09,116;UBERON:0007026,7.04e-09,116;UBERON:0004119,7.80e-09,118;UBERON:0000925,7.80e-09,118;UBERON:0006595,7.80e-09,118;UBERON:0004921,3.41e-08,114;UBERON:0005256,4.82e-08,45;UBERON:0009569,7.35e-08,66;UBERON:0003104,7.37e-08,61;UBERON:0009142,7.37e-08,61;UBERON:0000344,2.13e-07,15 | |||
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| |phase1_expression=2.40223270657191,70.1440569355116,74.6198752598839,77.1283738832417,96.672875879645,10.7442734023609,11.2134067485852,12.1375924035082,0.422366166455,0.936258105287974,0.68487187290202,0.8774937489487,0.684802919724823,1.31130603628496,7.32841475994458,2.83465374345756,2.79824751251259,0.473193248037357,0.411343300817216,1.27316895539409,11.0556277196391,0.992909512008853,0.261199789138935,21.9189619226967,27.5291137280604,59.1458923038471,37.0455316696804,23.4863643627619,32.4940047270399,37.5524893342297,27.4945833212578,1.27006134691926,5.53558308826113,0,8.08784535303569,5.48574329683025,6.32925004413344,1.25559489221072,0,2.09409497589519,1.76469446409304,0,1.45653105909346,2.89562681343828,3.75094645512204,3.85448179539531,10.1710874765245,3.92445281484804,8.78744730937887,8.1660557611199,7.13930750289349,10.062679505548,1.17447824240415,2.17608642603403,1.00828139742739,7.20326420900652,6.87680255853016,8.76642556871652,0.404632921719196,0,1.26766280701236,13.5537812827653,13.3394219416671,3.5995988691256,4.94433181283487,2.8419204597844,11.085204089181,23.8215349299364,0.725827286159344,0.675029691658453,0.630974884054146,4.85606673486466,3.53389665522582,1.10241719293459,0.670918297127655,0.919218786610021,2.20231761998777,3.06449611404451,2.91852413186863,0.395658863190582,0.823388792421687,0,1.67509799400829,3.93933827022176,2.75036845998258,2.94628585473668,4.27115042397309,1.86399445825301,3.02904773332736,3.32514864469856,3.18850937571846,43.0211938490693,223.71056878985,144.100752167297,176.089409128318,240.142411484172,35.9537715537285,3.06774580640504,2.33807404142582,4.94675404314476,4.3661460130771,2.56652954828636,22.9324715735981,28.4426681261332,6.71122227134764,9.12095515710355,8.08839112023653,53.8947912273963,2.07150306917737,8.16431764856536,4.68410382268567,5.78484408793068,6.91846491768175,4.52167921657868,6.58496759959947,8.04266184509923,17.0564527736718,5.78397427679647,1.76922110389975,6.95597454773859,6.18356251689102,6.30337829075789,212.486607788659,4.39171195517321,5.02672096352292,30.654846625031,1.1981512450592,2.39961092397363,1.27070227073065,3.74476598512057,0.915001205637253,1.7591609295801,3.47648640384553,0.767146371990992,1.87009240103604,2.27137768294861,3.97173519016234,5.22509276562391,4.80173241023982,29.6723016799928,1.43132487258974,1.14951052216736,1.44049703844279,1.9591626318643,2.4493139694478,1.40925092313335,2.52994656311268,6.46758426847539,0.431135985865684,1.13463648100692,2.46331573829528,6.35667624039967,4.17070873838397,4.52727816478817,3.2925141825271,1.99034266818493,0.702213187313235,1.28673953557358,1.13665399758237,2.27838349789052,1.40715635988658,1.98068267607116,2.60419209143731,1.57411385397923,1.69693824176116,1.16266972375204,1.87791380979733,1.40118410840603,2.96207729844265,1.97000956894914,1.78351381000883,3.07019973593198,3.07370161407471,1.74468344388483,3.99550902271842,1.9551876352064,151.662221389563,77.2195654657549,0.853153002140936,4.64473343720877,6.82997545007095,5.64713868945359,9.33987784148455,11.6037631928661,31.3189180619378,25.1989400727737,12.0640900224129,8.15721535368718,14.4273424468149,26.9645822596266,34.5820879799511,39.031689557856,1.51734320762465,2.85621281524322,2.25415471346161,3.25842124552503,4.07300223052014,10.8710520829994,11.8884689793604,23.7652338247159,25.4337939103027,29.1217306855449,133.10722956213,9.00963570866908,9.23827277032054,11.9176919563972,15.0116489827492,15.9176925436595,13.2405442926338,26.4680446454746,28.3736646856312,39.8114049122718,136.579796200987,33.4926852901653,54.9186304681627,81.33039869897,106.203268804972,86.3573903240427,5.17308932466493,1.89491411770485,2.44447464663039,2.37643120085263,1.87752198630802,4.18765643604539,4.28478553594825,7.02481132288076,3.94087860265477,4.4292937929755,4.30527875375215,2.45794972073607,3.62638461918381,2.74833211304872,7.53956419696361,3.80733978673097,2.45882136509518,1.65562047782839,3.21101179975584,2.69586879162067,1.96721934452011,3.02965112645248,11.042787679569,9.76096860741596,9.26320610251035,10.7535959078648,8.68914828921337,15.0030561318081,9.31064613852257,11.9824901743638,10.6727700045561,3.21321316421807,8.37446502728785,2.49291845134157,4.88660878060728,4.12425307431339,7.96470830039777,2.91336763385978,4.53485335447127,6.97838795096823,6.79194353625777,13.5271465095328,9.56184684722418,11.6330793432802,14.2598951353889,15.485801138855,10.5418608574999,14.4389760547462,3.06395645178409,1.44048875225048,1.29358683782755,3.42939256050548,2.12808280370728,3.38900753443934,1.97458824722545,4.87143918583359,5.16277757740163,3.38931313382112,0.661585194164886,6.10079135883476,2.9063596805263,3.19658502119226,2.14870219205646,1.80554989719567,20.1121777274597,3.8939313422207,3.41741761595705,3.50857675537478,3.51869602002452,6.02779062415011,6.69801715833023,4.11800711771741,2.37969801991397,1.81936888020755,2.9021994498929,15.2747298882418,2.05618395827738,3.86306987541013,4.96824567780286,5.2272074003617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| ||
|short_description=p1@Slc35d1 | |short_description=p1@Slc35d1 | ||
}} | }} |
Latest revision as of 02:13, 26 September 2015
Short description: | p1@Slc35d1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc35d1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1309 |
Association with transcript: | 0bp_to_ENSMUST00000150285_5end |
EntrezGene: | Slc35d1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.44e-08 | 25 |
endodermal cell | 4.42e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 2.71e-12 | 23 |
sac | 2.71e-12 | 23 |
liver | 1.33e-11 | 22 |
epithelial sac | 1.33e-11 | 22 |
digestive gland | 1.33e-11 | 22 |
epithelium of foregut-midgut junction | 1.33e-11 | 22 |
anatomical boundary | 1.33e-11 | 22 |
hepatobiliary system | 1.33e-11 | 22 |
foregut-midgut junction | 1.33e-11 | 22 |
hepatic diverticulum | 1.33e-11 | 22 |
liver primordium | 1.33e-11 | 22 |
septum transversum | 1.33e-11 | 22 |
liver bud | 1.33e-11 | 22 |
gastrointestinal system | 1.68e-11 | 47 |
intestine | 3.33e-11 | 31 |
trunk region element | 1.66e-10 | 79 |
abdomen element | 7.34e-10 | 49 |
abdominal segment element | 7.34e-10 | 49 |
abdominal segment of trunk | 7.34e-10 | 49 |
abdomen | 7.34e-10 | 49 |
exocrine gland | 1.31e-09 | 25 |
exocrine system | 1.31e-09 | 25 |
trunk | 6.70e-09 | 90 |
digestive system | 7.04e-09 | 116 |
digestive tract | 7.04e-09 | 116 |
primitive gut | 7.04e-09 | 116 |
endoderm-derived structure | 7.80e-09 | 118 |
endoderm | 7.80e-09 | 118 |
presumptive endoderm | 7.80e-09 | 118 |
subdivision of digestive tract | 3.41e-08 | 114 |
trunk mesenchyme | 4.82e-08 | 45 |
subdivision of trunk | 7.35e-08 | 66 |
mesenchyme | 7.37e-08 | 61 |
entire embryonic mesenchyme | 7.37e-08 | 61 |
mucosa | 2.13e-07 | 15 |