FFCP PHASE1:Mm9::chr4:149001393..149001405,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=65945 | |EntrezGene=65945 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=741 | |MCL_coexpression_id=741 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=154bp_to_ENSMUST00000151895_5end | |association_with_transcript=154bp_to_ENSMUST00000151895_5end | ||
|cluster_id=chr4:149001393..149001405,+ | |||
|description=CAGE_peak_5_at_Clstn1_5end | |description=CAGE_peak_5_at_Clstn1_5end | ||
|id=chr4:149001393..149001405,+ | |id=chr4:149001393..149001405,+ | ||
|ontology_enrichment_celltype=CL:0000117!4.50e-13!23;CL:0000337!4.50e-13!23;CL:0000221!1.94e-12!44;CL:0000133!1.94e-12!44;CL:0002319!5.33e-12!43;CL:0000055!2.40e-11!50;CL:0002321!9.38e-11!70;CL:0000220!9.38e-11!70;CL:0000540!2.32e-08!33;CL:0000047!2.32e-08!33;CL:0000031!2.32e-08!33;CL:0000404!2.32e-08!33;CL:0000393!2.67e-08!39;CL:0000211!2.67e-08!39 | |ontology_enrichment_celltype=CL:0000117!4.50e-13!23;CL:0000337!4.50e-13!23;CL:0000221!1.94e-12!44;CL:0000133!1.94e-12!44;CL:0002319!5.33e-12!43;CL:0000055!2.40e-11!50;CL:0002321!9.38e-11!70;CL:0000220!9.38e-11!70;CL:0000540!2.32e-08!33;CL:0000047!2.32e-08!33;CL:0000031!2.32e-08!33;CL:0000404!2.32e-08!33;CL:0000393!2.67e-08!39;CL:0000211!2.67e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.17e-26,23;CL:0000337,1.17e-26,23;CL:0002319,1.24e-18,43;CL:0000221,4.09e-18,44;CL:0000133,4.09e-18,44;CL:0000540,1.59e-17,33;CL:0000047,1.59e-17,33;CL:0000031,1.59e-17,33;CL:0000404,1.59e-17,33;CL:0000393,2.70e-14,39;CL:0000211,2.70e-14,39;CL:0002321,4.52e-11,70;CL:0002612,4.62e-09,3;CL:0002614,5.24e-09,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.18e-22!52;UBERON:0005068!4.18e-22!52;UBERON:0006241!4.18e-22!52;UBERON:0007135!4.18e-22!52;UBERON:0002020!5.35e-21!34;UBERON:0001017!7.15e-21!73;UBERON:0005743!7.15e-21!73;UBERON:0000073!2.57e-20!75;UBERON:0001016!2.57e-20!75;UBERON:0002616!9.87e-20!49;UBERON:0002346!1.09e-19!71;UBERON:0003075!1.09e-19!71;UBERON:0007284!1.09e-19!71;UBERON:0000955!6.06e-19!50;UBERON:0006238!6.06e-19!50;UBERON:0000033!8.39e-19!63;UBERON:0004121!2.25e-17!102;UBERON:0000924!2.25e-17!102;UBERON:0006601!2.25e-17!102;UBERON:0002791!4.59e-17!29;UBERON:0003528!4.59e-17!29;UBERON:0001893!4.59e-17!29;UBERON:0003080!1.17e-16!40;UBERON:0003056!3.50e-16!49;UBERON:0002780!4.18e-16!39;UBERON:0001890!4.18e-16!39;UBERON:0006240!4.18e-16!39;UBERON:0000956!9.16e-14!21;UBERON:0001869!9.16e-14!21;UBERON:0000203!9.16e-14!21;UBERON:0002619!2.92e-11!17;UBERON:0007811!3.54e-10!86;UBERON:0000153!4.59e-10!94;UBERON:0002021!2.00e-09!10;UBERON:0000411!2.00e-09!10;UBERON:0001950!2.00e-09!10;UBERON:0000025!8.94e-08!114;UBERON:0004111!1.24e-07!122;UBERON:0000064!4.25e-07!99 | |ontology_enrichment_uberon=UBERON:0001049!4.18e-22!52;UBERON:0005068!4.18e-22!52;UBERON:0006241!4.18e-22!52;UBERON:0007135!4.18e-22!52;UBERON:0002020!5.35e-21!34;UBERON:0001017!7.15e-21!73;UBERON:0005743!7.15e-21!73;UBERON:0000073!2.57e-20!75;UBERON:0001016!2.57e-20!75;UBERON:0002616!9.87e-20!49;UBERON:0002346!1.09e-19!71;UBERON:0003075!1.09e-19!71;UBERON:0007284!1.09e-19!71;UBERON:0000955!6.06e-19!50;UBERON:0006238!6.06e-19!50;UBERON:0000033!8.39e-19!63;UBERON:0004121!2.25e-17!102;UBERON:0000924!2.25e-17!102;UBERON:0006601!2.25e-17!102;UBERON:0002791!4.59e-17!29;UBERON:0003528!4.59e-17!29;UBERON:0001893!4.59e-17!29;UBERON:0003080!1.17e-16!40;UBERON:0003056!3.50e-16!49;UBERON:0002780!4.18e-16!39;UBERON:0001890!4.18e-16!39;UBERON:0006240!4.18e-16!39;UBERON:0000956!9.16e-14!21;UBERON:0001869!9.16e-14!21;UBERON:0000203!9.16e-14!21;UBERON:0002619!2.92e-11!17;UBERON:0007811!3.54e-10!86;UBERON:0000153!4.59e-10!94;UBERON:0002021!2.00e-09!10;UBERON:0000411!2.00e-09!10;UBERON:0001950!2.00e-09!10;UBERON:0000025!8.94e-08!114;UBERON:0004111!1.24e-07!122;UBERON:0000064!4.25e-07!99 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.21e-39,34;UBERON:0000073,5.98e-33,54;UBERON:0001017,2.66e-31,73;UBERON:0001016,2.60e-30,75;UBERON:0001049,4.76e-29,52;UBERON:0005068,4.76e-29,52;UBERON:0006241,4.76e-29,52;UBERON:0007135,4.76e-29,52;UBERON:0002021,3.24e-28,10;UBERON:0000411,3.24e-28,10;UBERON:0001950,3.24e-28,10;UBERON:0003528,4.77e-28,29;UBERON:0002791,4.77e-28,29;UBERON:0001893,4.77e-28,29;UBERON:0004121,1.08e-22,95;UBERON:0000924,1.08e-22,95;UBERON:0006601,1.08e-22,95;UBERON:0002346,1.33e-22,64;UBERON:0003075,1.33e-22,64;UBERON:0007284,1.33e-22,64;UBERON:0002780,3.48e-22,39;UBERON:0001890,3.48e-22,39;UBERON:0006240,3.48e-22,39;UBERON:0003080,1.59e-21,40;UBERON:0000956,6.96e-21,21;UBERON:0001869,6.96e-21,21;UBERON:0000203,6.96e-21,21;UBERON:0002616,2.28e-20,46;UBERON:0000955,7.72e-20,47;UBERON:0006238,7.72e-20,47;UBERON:0010371,3.73e-19,73;UBERON:0002619,4.44e-19,17;UBERON:0003056,8.71e-17,49;UBERON:0010314,4.34e-14,92;UBERON:0001948,4.91e-14,5;UBERON:0002315,4.91e-14,5;UBERON:0002240,1.21e-11,6;UBERON:0005174,1.21e-11,6;UBERON:0001137,1.21e-11,6;UBERON:0000025,2.49e-10,114;UBERON:0004111,2.66e-09,122;UBERON:0002257,4.62e-09,3;UBERON:0002038,5.24e-09,3;UBERON:0009663,5.24e-09,3;UBERON:0009661,5.24e-09,3;UBERON:0000125,5.24e-09,3;UBERON:0002308,5.24e-09,3;UBERON:0011216,8.01e-09,194;UBERON:0002420,3.50e-08,8;UBERON:0007245,3.50e-08,8;UBERON:0010009,3.50e-08,8;UBERON:0010011,3.50e-08,8;UBERON:0000454,3.50e-08,8;UBERON:0003076,6.43e-08,12;UBERON:0003057,6.43e-08,12;UBERON:0002950,7.55e-07,4;UBERON:0001891,7.55e-07,4;UBERON:0009616,7.55e-07,4;UBERON:0010286,7.55e-07,4 | |||
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0.503637815735669,0.467225281191051,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.255129870453209,0,0,0,0.68822784320151,0,0,0.215471232685889,0.570070258369122,0.252030129759931,0.665191531965914,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.183546752161682,0.782391344348039,0.436050312760893,2.41654801007919,0.972149495371417,0.279972843250725,1.43752564364972,0,0,0.336093799142464,0.514518872071894,0,0,1.41621522601718,1.05798195854407,0,0.338844532069132,0,0,1.97773272513395,0,0.898800331555214,2.68952813725088,0.622137673850866,2.70011876663381,1.05162480675691,1.99955689082663,2.87129103237098,0.734944795289724,0.287536413054709,0.919218786610021,0,2.29837208553338,1.99688493233117,0.791317726381163,1.00636407962651,1.56274011167028,3.90856198601933,2.25105044012672,1.83357897332172,2.94628585473668,3.27454865837937,1.1183966749518,0.151452386666368,0,0.289864488701678,0,0,0,0,0,0,0.511290967734173,0.259786004602869,0.35333957451034,0.422530259330042,0,0,0,0.865964164044856,1.01343946190039,0.505524445014783,0.11418387971906,0,0,0.346970653532272,0,0,0.150722640552623,0,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0.292780797011547,2.30391377494801,0,0,0,0,0.599162557619291,0,0.251308704225729,0.695297280769106,0.511430914660661,1.45451631191692,0,0.203678727700633,0,0,0.841767423545896,0,0,0.180062129805349,0.150704817835715,0.408218994907967,0,0.187403449119458,0.517406741478031,0.215567992932842,0,0,0.43839146485515,0,0.696504333044333,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0.162137619091711,0.292399974850665,0,0.134206418760372,0,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0,0,0.126473074248515,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0.234690248288502,0.335012514883631,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0.551873492609465,0.160550589987792,0.234423373184406,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0.162886959353576,0,0,0,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0,0.258717367565509,0.214337035031592,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0.259229946583586,0,0,0.149516546043979,0,0.194451188344048,0,0.337912250981556,0,0,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0.0897138566094757,0.167884616364078,0,0,0.36630324853453,0,0,3.3885110557024,6.44455331110048,2.29158205375759,4.29632955859219,7.53590771747707,4.5323633843382,2.70009000092722,2.70192721934532,1.35942722695261,4.65984280576638,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.394017929502254,0,0.154936841185966,0.192906610981141,0,0,0.429742108096597,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0.503637815735669,0.467225281191051,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.255129870453209,0,0,0,0.68822784320151,0,0,0.215471232685889,0.570070258369122,0.252030129759931,0.665191531965914,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.183546752161682,0.782391344348039,0.436050312760893,2.41654801007919,0.972149495371417,0.279972843250725,1.43752564364972,0,0,0.336093799142464,0.514518872071894,0,0,1.41621522601718,1.05798195854407,0,0.338844532069132,0,0,1.97773272513395,0,0.898800331555214,2.68952813725088,0.622137673850866,2.70011876663381,1.05162480675691,1.99955689082663,2.87129103237098,0.734944795289724,0.287536413054709,0.919218786610021,0,2.29837208553338,1.99688493233117,0.791317726381163,1.00636407962651,1.56274011167028,3.90856198601933,2.25105044012672,1.83357897332172,2.94628585473668,3.27454865837937,1.1183966749518,0.151452386666368,0,0.289864488701678,0,0,0,0,0,0,0.511290967734173,0.259786004602869,0.35333957451034,0.422530259330042,0,0,0,0.865964164044856,1.01343946190039,0.505524445014783,0.11418387971906,0,0,0.346970653532272,0,0,0.150722640552623,0,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0.292780797011547,2.30391377494801,0,0,0,0,0.599162557619291,0,0.251308704225729,0.695297280769106,0.511430914660661,1.45451631191692,0,0.203678727700633,0,0,0.841767423545896,0,0,0.180062129805349,0.150704817835715,0.408218994907967,0,0.187403449119458,0.517406741478031,0.215567992932842,0,0,0.43839146485515,0,0.696504333044333,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0.162137619091711,0.292399974850665,0,0.134206418760372,0,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0,0,0.126473074248515,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0.234690248288502,0.335012514883631,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0.551873492609465,0.160550589987792,0.234423373184406,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0.162886959353576,0,0,0,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0,0.258717367565509,0.214337035031592,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0.259229946583586,0,0,0.149516546043979,0,0.194451188344048,0,0.337912250981556,0,0,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0.0897138566094757,0.167884616364078,0,0,0.36630324853453,0,0,3.3885110557024,6.44455331110048,2.29158205375759,4.29632955859219,7.53590771747707,4.5323633843382,2.70009000092722,2.70192721934532,1.35942722695261,4.65984280576638,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.394017929502254,0,0.154936841185966,0.192906610981141,0,0,0.429742108096597,0,0,0 | ||
|short_description=p5@Clstn1 | |short_description=p5@Clstn1 | ||
}} | }} |
Latest revision as of 17:45, 26 September 2015
Short description: | p5@Clstn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Clstn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:741 |
Association with transcript: | 154bp_to_ENSMUST00000151895_5end |
EntrezGene: | Clstn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.17e-26 | 23 |
neuroblast (sensu Vertebrata) | 1.17e-26 | 23 |
neural cell | 1.24e-18 | 43 |
ectodermal cell | 4.09e-18 | 44 |
neurectodermal cell | 4.09e-18 | 44 |
neuron | 1.59e-17 | 33 |
neuronal stem cell | 1.59e-17 | 33 |
neuroblast | 1.59e-17 | 33 |
electrically signaling cell | 1.59e-17 | 33 |
electrically responsive cell | 2.70e-14 | 39 |
electrically active cell | 2.70e-14 | 39 |
embryonic cell | 4.52e-11 | 70 |
neuron of the ventral spinal cord | 4.62e-09 | 3 |
neuron of the substantia nigra | 5.24e-09 | 3 |