FFCP PHASE1:Mm9::chr6:56312350..56312380,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18575 | |EntrezGene=18575 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2139 | |MCL_coexpression_id=2139 | ||
|TSSclassifier=NA | |||
|UniProt=Q64338,E9Q7V6,Q5D0E7,Q3USZ6 | |UniProt=Q64338,E9Q7V6,Q5D0E7,Q3USZ6 | ||
|association_with_transcript=5bp_to_ENSMUST00000044505,ENSMUST00000164037,ENSMUST00000166102,NM_001025568,NM_001159952,NM_001159953,uc009caz.2,uc009cbe.2,uc009cbh.2,uc012emk.1_5end | |association_with_transcript=5bp_to_ENSMUST00000044505,ENSMUST00000164037,ENSMUST00000166102,NM_001025568,NM_001159952,NM_001159953,uc009caz.2,uc009cbe.2,uc009cbh.2,uc012emk.1_5end | ||
|cluster_id=chr6:56312350..56312380,- | |||
|description=CAGE_peak_1_at_Pde1c_5end | |description=CAGE_peak_1_at_Pde1c_5end | ||
|id=chr6:56312350..56312380,- | |id=chr6:56312350..56312380,- | ||
|ontology_enrichment_celltype=CL:0000540!2.29e-11!33;CL:0000047!2.29e-11!33;CL:0000031!2.29e-11!33;CL:0000404!2.29e-11!33;CL:0000393!2.87e-08!39;CL:0000211!2.87e-08!39;CL:0000117!1.26e-07!23;CL:0000337!1.26e-07!23 | |ontology_enrichment_celltype=CL:0000540!2.29e-11!33;CL:0000047!2.29e-11!33;CL:0000031!2.29e-11!33;CL:0000404!2.29e-11!33;CL:0000393!2.87e-08!39;CL:0000211!2.87e-08!39;CL:0000117!1.26e-07!23;CL:0000337!1.26e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.55e-13,33;CL:0000047,5.55e-13,33;CL:0000031,5.55e-13,33;CL:0000404,5.55e-13,33;CL:0000393,3.76e-10,39;CL:0000211,3.76e-10,39;CL:0000117,7.53e-09,23;CL:0000337,7.53e-09,23;CL:0002319,1.46e-07,43;CL:0000221,3.55e-07,44;CL:0000133,3.55e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.26e-13!73;UBERON:0005743!7.26e-13!73;UBERON:0000073!1.87e-12!75;UBERON:0001016!1.87e-12!75;UBERON:0000033!2.87e-11!63;UBERON:0004121!9.97e-10!102;UBERON:0000924!9.97e-10!102;UBERON:0006601!9.97e-10!102;UBERON:0002346!1.73e-09!71;UBERON:0003075!1.73e-09!71;UBERON:0007284!1.73e-09!71;UBERON:0000955!4.19e-09!50;UBERON:0006238!4.19e-09!50;UBERON:0001049!4.52e-09!52;UBERON:0005068!4.52e-09!52;UBERON:0006241!4.52e-09!52;UBERON:0007135!4.52e-09!52;UBERON:0002616!7.65e-09!49;UBERON:0003056!1.62e-08!49;UBERON:0000153!1.78e-07!94;UBERON:0007811!3.00e-07!86;UBERON:0003080!6.23e-07!40;UBERON:0007100!8.29e-07!18;UBERON:0000948!8.29e-07!18;UBERON:0005498!8.29e-07!18;UBERON:0004140!8.29e-07!18;UBERON:0009881!8.29e-07!18;UBERON:0004141!8.29e-07!18;UBERON:0003084!8.29e-07!18;UBERON:0007005!8.29e-07!18;UBERON:0004139!8.29e-07!18;UBERON:0004291!8.29e-07!18 | |ontology_enrichment_uberon=UBERON:0001017!7.26e-13!73;UBERON:0005743!7.26e-13!73;UBERON:0000073!1.87e-12!75;UBERON:0001016!1.87e-12!75;UBERON:0000033!2.87e-11!63;UBERON:0004121!9.97e-10!102;UBERON:0000924!9.97e-10!102;UBERON:0006601!9.97e-10!102;UBERON:0002346!1.73e-09!71;UBERON:0003075!1.73e-09!71;UBERON:0007284!1.73e-09!71;UBERON:0000955!4.19e-09!50;UBERON:0006238!4.19e-09!50;UBERON:0001049!4.52e-09!52;UBERON:0005068!4.52e-09!52;UBERON:0006241!4.52e-09!52;UBERON:0007135!4.52e-09!52;UBERON:0002616!7.65e-09!49;UBERON:0003056!1.62e-08!49;UBERON:0000153!1.78e-07!94;UBERON:0007811!3.00e-07!86;UBERON:0003080!6.23e-07!40;UBERON:0007100!8.29e-07!18;UBERON:0000948!8.29e-07!18;UBERON:0005498!8.29e-07!18;UBERON:0004140!8.29e-07!18;UBERON:0009881!8.29e-07!18;UBERON:0004141!8.29e-07!18;UBERON:0003084!8.29e-07!18;UBERON:0007005!8.29e-07!18;UBERON:0004139!8.29e-07!18;UBERON:0004291!8.29e-07!18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.25e-16,92;UBERON:0001017,8.89e-16,73;UBERON:0001016,7.70e-15,75;UBERON:0002346,2.23e-13,64;UBERON:0003075,2.23e-13,64;UBERON:0007284,2.23e-13,64;UBERON:0004121,8.21e-13,95;UBERON:0000924,8.21e-13,95;UBERON:0006601,8.21e-13,95;UBERON:0000073,3.13e-11,54;UBERON:0001049,2.17e-10,52;UBERON:0005068,2.17e-10,52;UBERON:0006241,2.17e-10,52;UBERON:0007135,2.17e-10,52;UBERON:0010371,2.32e-10,73;UBERON:0000955,2.27e-09,47;UBERON:0006238,2.27e-09,47;UBERON:0002616,4.71e-09,46;UBERON:0003056,1.13e-08,49;UBERON:0001894,1.30e-07,10;UBERON:0006222,1.30e-07,10;UBERON:0003080,1.43e-07,40;UBERON:0002780,4.47e-07,39;UBERON:0001890,4.47e-07,39;UBERON:0006240,4.47e-07,39;UBERON:0007100,7.12e-07,18;UBERON:0000948,7.12e-07,18;UBERON:0005498,7.12e-07,18;UBERON:0004140,7.12e-07,18;UBERON:0009881,7.12e-07,18;UBERON:0004141,7.12e-07,18;UBERON:0003084,7.12e-07,18;UBERON:0007005,7.12e-07,18;UBERON:0004139,7.12e-07,18;UBERON:0004291,7.12e-07,18;UBERON:0000007,9.18e-07,8;UBERON:0003296,9.18e-07,8;UBERON:0010133,9.18e-07,8 | |||
|phase1_expression=1.44133962394315,0.697950815278722,1.81999695755814,0,0,2.35030980676646,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.411343300817216,0,1.27564935226605,0,0,5.91971964335605,5.73523202667925,0.57423196411502,0,2.37018355954478,0,0,2.21730510655305,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0.286533439938757,1.54701627683233,1.82084814773638,2.11596391708813,1.90149421051854,0,0,0,0,0,0,0,1.55534418462716,1.4850653216486,1.47227472945967,0.571301968807607,1.32521124570968,1.71487118900936,1.15014565221884,2.75765635983006,6.60695285996332,1.53224805702225,3.07213066512487,3.03338461779446,2.10421580285542,1.04182674111352,3.62937898701795,1.68828783009504,2.90316670775939,1.76777151284201,1.56608848879013,1.67759501242771,0.151452386666368,0.529000920747499,0,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0,0,0,0.79928715803342,0.776813650941515,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0,0,0.647067399789637,0.220841518460394,0,3.72783522436244,23.7152445579353,32.2547928492721,0.510914110417183,0,0,0,3.74476598512057,2.74500361691176,3.01570445070875,1.04294592115366,0.255715457330331,2.49345653471472,1.78465389374533,0,0.373220911830279,0.252722758433675,2.73574412652416,1.04096354370163,1.14951052216736,0.720248519221397,0.90422890701429,1.76894897793452,1.2811372028485,1.59292931751539,2.32833033665114,0.215567992932842,1.89106080167819,0.703804496655795,0.43839146485515,1.11218899690239,0.696504333044333,0.61734640922383,0,0,0,0,0.828503090142008,0.469052119962192,0.540186184383045,2.60419209143731,9.83821158737019,7.86762275725629,15.8123082430277,27.3638869427612,29.0745702494252,28.3042941851186,29.8784784623953,33.5624871519843,32.8949971706998,22.1745616443961,25.2308067269499,1.68231958851302,1.54356918568927,0,1.05780226665418,0,0,0.257734922644187,1.00841762311671,0.444756087689741,0.760902504450237,0.474529061544512,1.31759163779209,1.25667604400135,0.795825888164603,1.55971269695296,1.79763881730844,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0.407302655690628,0.387904974335251,0.631222379012867,0.822074982615345,0.442830443938806,1.255989822731,0.493588655687202,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.488894929326078,0.169745085775188,0.234690248288502,0.335012514883631,0,0.390267295715598,0,0.221464689648775,0.159454768657487,0.163863314715738,0.690739927463582,0.144649058581512,0,0,0.491764273019036,0.275936746304732,5.45872005958493,3.7507739709505,0,0,4.10160685241134,4.68526493155966,6.67812532971677,0.716906393857656,2.67358408898873,1.13230612315533,3.23848561339915,7.89090816360542,5.13874111330481,1.60660658210904,0.141940085208269,0.35613120733451,0.488660878060728,0.329940245945071,0,1.69946445308487,1.209294227859,1.13163047853539,1.18120757152309,0.922305443831782,1.29214146584111,2.18120237686503,1.78248689192361,0,0,0,9.87274856685985,2.52085531643834,2.71653235943784,3.85806663056866,7.80297028026004,5.17269571046005,4.60737257685939,3.04464949114599,0.704015124191131,0.21183207086382,0,0.16488625294148,0.484393280087717,0,0,0,1.45740418314925,4.82105785227325,0,0.206386867963223,0.185194527369712,0,0,0,0.169978429993855,0,0,5.72802370809068,0.632671987162271,1.42323626988794,0.972048067396211,1.04544148007234,1.09181281873089,3.77620169877498,5.70308844504818,12.8260411572175,0.648074866458964,3.10669656543463,0,0.149516546043979,0,0,0,0,0.352071715937262,0.13020438484395,0,0,0,1.58005560314089,0.202725215290164,0.821687657318618,0.389762468933385,0.895133478337407,0.39736270956253,0.480781798079875,1.18151621739662,0.706765149637033,0.609654453239999,0.907435666231565,1.36441033035653,0.769694733122636,0.818138315270983,0.453460767230423,0,0,0,0,1.12609485270709,0.549454872801795,0,0.501572104035363,0.564751842617067,0.920650473014354,0,0,0,1.5107877947794,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.207574695168353,1.19707462020309,1.53660245178721,0.243106717068294,1.46729213839588,1.10306105070008,2.44471400581777,1.03017528619447,0.962757628775446,1.76888048234658,0.760437899670719,2.64076877940507,1.591905626988,1.79270426733634,1.20614484806788,1.90517476513229,1.27472758539341,1.15745532278223,1.23625770240992,1.47198920134397,1.71434626192708,1.4198064492747,1.1921809497366,1.59881058295561,1.31753132581463,1.26921911837515,1.64635175585495,2.36762740294059,1.62964936615034,2.80571135828869,1.77952527186261,1.37906275325789,0.818462086339379,1.08455788830176,0.578719832943424,1.24905288968973,1.40358965067245,0.859484216193193,0.956441660344217,1.10295709559758,0.695603506861264 | |phase1_expression=1.44133962394315,0.697950815278722,1.81999695755814,0,0,2.35030980676646,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.411343300817216,0,1.27564935226605,0,0,5.91971964335605,5.73523202667925,0.57423196411502,0,2.37018355954478,0,0,2.21730510655305,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0.286533439938757,1.54701627683233,1.82084814773638,2.11596391708813,1.90149421051854,0,0,0,0,0,0,0,1.55534418462716,1.4850653216486,1.47227472945967,0.571301968807607,1.32521124570968,1.71487118900936,1.15014565221884,2.75765635983006,6.60695285996332,1.53224805702225,3.07213066512487,3.03338461779446,2.10421580285542,1.04182674111352,3.62937898701795,1.68828783009504,2.90316670775939,1.76777151284201,1.56608848879013,1.67759501242771,0.151452386666368,0.529000920747499,0,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0,0,0,0.79928715803342,0.776813650941515,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0,0,0.647067399789637,0.220841518460394,0,3.72783522436244,23.7152445579353,32.2547928492721,0.510914110417183,0,0,0,3.74476598512057,2.74500361691176,3.01570445070875,1.04294592115366,0.255715457330331,2.49345653471472,1.78465389374533,0,0.373220911830279,0.252722758433675,2.73574412652416,1.04096354370163,1.14951052216736,0.720248519221397,0.90422890701429,1.76894897793452,1.2811372028485,1.59292931751539,2.32833033665114,0.215567992932842,1.89106080167819,0.703804496655795,0.43839146485515,1.11218899690239,0.696504333044333,0.61734640922383,0,0,0,0,0.828503090142008,0.469052119962192,0.540186184383045,2.60419209143731,9.83821158737019,7.86762275725629,15.8123082430277,27.3638869427612,29.0745702494252,28.3042941851186,29.8784784623953,33.5624871519843,32.8949971706998,22.1745616443961,25.2308067269499,1.68231958851302,1.54356918568927,0,1.05780226665418,0,0,0.257734922644187,1.00841762311671,0.444756087689741,0.760902504450237,0.474529061544512,1.31759163779209,1.25667604400135,0.795825888164603,1.55971269695296,1.79763881730844,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0.407302655690628,0.387904974335251,0.631222379012867,0.822074982615345,0.442830443938806,1.255989822731,0.493588655687202,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.488894929326078,0.169745085775188,0.234690248288502,0.335012514883631,0,0.390267295715598,0,0.221464689648775,0.159454768657487,0.163863314715738,0.690739927463582,0.144649058581512,0,0,0.491764273019036,0.275936746304732,5.45872005958493,3.7507739709505,0,0,4.10160685241134,4.68526493155966,6.67812532971677,0.716906393857656,2.67358408898873,1.13230612315533,3.23848561339915,7.89090816360542,5.13874111330481,1.60660658210904,0.141940085208269,0.35613120733451,0.488660878060728,0.329940245945071,0,1.69946445308487,1.209294227859,1.13163047853539,1.18120757152309,0.922305443831782,1.29214146584111,2.18120237686503,1.78248689192361,0,0,0,9.87274856685985,2.52085531643834,2.71653235943784,3.85806663056866,7.80297028026004,5.17269571046005,4.60737257685939,3.04464949114599,0.704015124191131,0.21183207086382,0,0.16488625294148,0.484393280087717,0,0,0,1.45740418314925,4.82105785227325,0,0.206386867963223,0.185194527369712,0,0,0,0.169978429993855,0,0,5.72802370809068,0.632671987162271,1.42323626988794,0.972048067396211,1.04544148007234,1.09181281873089,3.77620169877498,5.70308844504818,12.8260411572175,0.648074866458964,3.10669656543463,0,0.149516546043979,0,0,0,0,0.352071715937262,0.13020438484395,0,0,0,1.58005560314089,0.202725215290164,0.821687657318618,0.389762468933385,0.895133478337407,0.39736270956253,0.480781798079875,1.18151621739662,0.706765149637033,0.609654453239999,0.907435666231565,1.36441033035653,0.769694733122636,0.818138315270983,0.453460767230423,0,0,0,0,1.12609485270709,0.549454872801795,0,0.501572104035363,0.564751842617067,0.920650473014354,0,0,0,1.5107877947794,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.207574695168353,1.19707462020309,1.53660245178721,0.243106717068294,1.46729213839588,1.10306105070008,2.44471400581777,1.03017528619447,0.962757628775446,1.76888048234658,0.760437899670719,2.64076877940507,1.591905626988,1.79270426733634,1.20614484806788,1.90517476513229,1.27472758539341,1.15745532278223,1.23625770240992,1.47198920134397,1.71434626192708,1.4198064492747,1.1921809497366,1.59881058295561,1.31753132581463,1.26921911837515,1.64635175585495,2.36762740294059,1.62964936615034,2.80571135828869,1.77952527186261,1.37906275325789,0.818462086339379,1.08455788830176,0.578719832943424,1.24905288968973,1.40358965067245,0.859484216193193,0.956441660344217,1.10295709559758,0.695603506861264 | ||
|short_description=p1@Pde1c | |short_description=p1@Pde1c | ||
}} | }} |
Latest revision as of 14:23, 1 October 2015
Short description: | p1@Pde1c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pde1c_5end |
Coexpression cluster: | MCL_coexpression_mm9:2139 |
Association with transcript: | 5bp_to_ENSMUST00000044505, ENSMUST00000164037, ENSMUST00000166102, NM_001025568, NM_001159952, NM_001159953, uc009caz.2, uc009cbe.2, uc009cbh.2, uc012emk.1_5end |
EntrezGene: | Pde1c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.55e-13 | 33 |
neuronal stem cell | 5.55e-13 | 33 |
neuroblast | 5.55e-13 | 33 |
electrically signaling cell | 5.55e-13 | 33 |
electrically responsive cell | 3.76e-10 | 39 |
electrically active cell | 3.76e-10 | 39 |
CNS neuron (sensu Vertebrata) | 7.53e-09 | 23 |
neuroblast (sensu Vertebrata) | 7.53e-09 | 23 |
neural cell | 1.46e-07 | 43 |
ectodermal cell | 3.55e-07 | 44 |
neurectodermal cell | 3.55e-07 | 44 |