FFCP PHASE1:Mm9::chr13:42147117..42147142,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=110521 | |EntrezGene=110521 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |MCL_coexpression_id=60 | ||
|TSSclassifier=NA | |||
|UniProt=F8VPM9,Q03172 | |UniProt=F8VPM9,Q03172 | ||
|association_with_transcript=-247bp_to_ENSMUST00000060148,NM_007772,uc007qfk.1_5end | |association_with_transcript=-247bp_to_ENSMUST00000060148,NM_007772,uc007qfk.1_5end | ||
|cluster_id=chr13:42147117..42147142,+ | |||
|description=CAGE_peak_3_at_Hivep1_5end | |description=CAGE_peak_3_at_Hivep1_5end | ||
|id=chr13:42147117..42147142,+ | |id=chr13:42147117..42147142,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.04e-16!23;CL:0000337!1.04e-16!23;CL:0000540!1.26e-10!33;CL:0000047!1.26e-10!33;CL:0000031!1.26e-10!33;CL:0000404!1.26e-10!33;CL:0000393!1.17e-07!39;CL:0000211!1.17e-07!39;CL:0000221!3.46e-07!44;CL:0000133!3.46e-07!44;CL:0002319!3.54e-07!43 | |ontology_enrichment_celltype=CL:0000117!1.04e-16!23;CL:0000337!1.04e-16!23;CL:0000540!1.26e-10!33;CL:0000047!1.26e-10!33;CL:0000031!1.26e-10!33;CL:0000404!1.26e-10!33;CL:0000393!1.17e-07!39;CL:0000211!1.17e-07!39;CL:0000221!3.46e-07!44;CL:0000133!3.46e-07!44;CL:0002319!3.54e-07!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.56e-38,23;CL:0000337,6.56e-38,23;CL:0000540,8.16e-25,33;CL:0000047,8.16e-25,33;CL:0000031,8.16e-25,33;CL:0000404,8.16e-25,33;CL:0000393,3.46e-20,39;CL:0000211,3.46e-20,39;CL:0002319,7.98e-18,43;CL:0000221,2.66e-17,44;CL:0000133,2.66e-17,44;CL:0002609,2.64e-12,6;CL:0002321,5.36e-09,70;CL:0002613,2.04e-08,3;CL:0000120,1.42e-07,3;CL:0002612,1.57e-07,3;CL:0002608,6.28e-07,3;CL:0002610,7.98e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.66e-18!52;UBERON:0005068!3.66e-18!52;UBERON:0006241!3.66e-18!52;UBERON:0007135!3.66e-18!52;UBERON:0002020!4.82e-18!34;UBERON:0000033!1.78e-17!63;UBERON:0000955!4.14e-17!50;UBERON:0006238!4.14e-17!50;UBERON:0002616!1.70e-16!49;UBERON:0001017!2.41e-16!73;UBERON:0005743!2.41e-16!73;UBERON:0000073!2.64e-16!75;UBERON:0001016!2.64e-16!75;UBERON:0002346!3.06e-16!71;UBERON:0003075!3.06e-16!71;UBERON:0007284!3.06e-16!71;UBERON:0002791!1.17e-14!29;UBERON:0003528!1.17e-14!29;UBERON:0001893!1.17e-14!29;UBERON:0004121!2.41e-14!102;UBERON:0000924!2.41e-14!102;UBERON:0006601!2.41e-14!102;UBERON:0003056!3.28e-14!49;UBERON:0003080!8.36e-13!40;UBERON:0002780!1.81e-12!39;UBERON:0001890!1.81e-12!39;UBERON:0006240!1.81e-12!39;UBERON:0000956!4.63e-11!21;UBERON:0001869!4.63e-11!21;UBERON:0000203!4.63e-11!21;UBERON:0007811!2.72e-10!86;UBERON:0000153!1.27e-09!94;UBERON:0002619!1.76e-08!17;UBERON:0002021!9.61e-08!10;UBERON:0000411!9.61e-08!10;UBERON:0001950!9.61e-08!10 | |ontology_enrichment_uberon=UBERON:0001049!3.66e-18!52;UBERON:0005068!3.66e-18!52;UBERON:0006241!3.66e-18!52;UBERON:0007135!3.66e-18!52;UBERON:0002020!4.82e-18!34;UBERON:0000033!1.78e-17!63;UBERON:0000955!4.14e-17!50;UBERON:0006238!4.14e-17!50;UBERON:0002616!1.70e-16!49;UBERON:0001017!2.41e-16!73;UBERON:0005743!2.41e-16!73;UBERON:0000073!2.64e-16!75;UBERON:0001016!2.64e-16!75;UBERON:0002346!3.06e-16!71;UBERON:0003075!3.06e-16!71;UBERON:0007284!3.06e-16!71;UBERON:0002791!1.17e-14!29;UBERON:0003528!1.17e-14!29;UBERON:0001893!1.17e-14!29;UBERON:0004121!2.41e-14!102;UBERON:0000924!2.41e-14!102;UBERON:0006601!2.41e-14!102;UBERON:0003056!3.28e-14!49;UBERON:0003080!8.36e-13!40;UBERON:0002780!1.81e-12!39;UBERON:0001890!1.81e-12!39;UBERON:0006240!1.81e-12!39;UBERON:0000956!4.63e-11!21;UBERON:0001869!4.63e-11!21;UBERON:0000203!4.63e-11!21;UBERON:0007811!2.72e-10!86;UBERON:0000153!1.27e-09!94;UBERON:0002619!1.76e-08!17;UBERON:0002021!9.61e-08!10;UBERON:0000411!9.61e-08!10;UBERON:0001950!9.61e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.66e-35,34;UBERON:0000073,3.99e-30,54;UBERON:0001017,7.95e-28,73;UBERON:0001016,7.05e-27,75;UBERON:0003528,2.37e-26,29;UBERON:0002791,2.37e-26,29;UBERON:0001893,2.37e-26,29;UBERON:0001049,6.64e-25,52;UBERON:0005068,6.64e-25,52;UBERON:0006241,6.64e-25,52;UBERON:0007135,6.64e-25,52;UBERON:0000956,4.90e-23,21;UBERON:0001869,4.90e-23,21;UBERON:0000203,4.90e-23,21;UBERON:0004121,1.36e-19,95;UBERON:0000924,1.36e-19,95;UBERON:0006601,1.36e-19,95;UBERON:0000955,1.42e-19,47;UBERON:0006238,1.42e-19,47;UBERON:0002346,5.28e-19,64;UBERON:0003075,5.28e-19,64;UBERON:0007284,5.28e-19,64;UBERON:0002780,2.65e-18,39;UBERON:0001890,2.65e-18,39;UBERON:0006240,2.65e-18,39;UBERON:0002616,2.90e-18,46;UBERON:0003080,1.01e-17,40;UBERON:0002619,4.50e-16,17;UBERON:0010371,7.40e-16,73;UBERON:0003056,1.47e-13,49;UBERON:0002021,2.46e-13,10;UBERON:0000411,2.46e-13,10;UBERON:0001950,2.46e-13,10;UBERON:0010314,2.98e-11,92;UBERON:0001948,1.24e-10,5;UBERON:0002315,1.24e-10,5;UBERON:0002240,8.44e-09,6;UBERON:0005174,8.44e-09,6;UBERON:0001137,8.44e-09,6;UBERON:0000025,1.14e-08,114;UBERON:0003076,8.43e-08,12;UBERON:0003057,8.43e-08,12;UBERON:0004111,1.11e-07,122;UBERON:0002257,1.57e-07,3;UBERON:0004684,7.98e-07,3;UBERON:0002275,7.98e-07,3 | |||
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| ||
|short_description=p3@Hivep1 | |short_description=p3@Hivep1 | ||
}} | }} |
Latest revision as of 14:52, 1 October 2015
Short description: | p3@Hivep1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Hivep1_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | -247bp_to_ENSMUST00000060148, NM_007772, uc007qfk.1_5end |
EntrezGene: | Hivep1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.56e-38 | 23 |
neuroblast (sensu Vertebrata) | 6.56e-38 | 23 |
neuron | 8.16e-25 | 33 |
neuronal stem cell | 8.16e-25 | 33 |
neuroblast | 8.16e-25 | 33 |
electrically signaling cell | 8.16e-25 | 33 |
electrically responsive cell | 3.46e-20 | 39 |
electrically active cell | 3.46e-20 | 39 |
neural cell | 7.98e-18 | 43 |
ectodermal cell | 2.66e-17 | 44 |
neurectodermal cell | 2.66e-17 | 44 |
neuron of cerebral cortex | 2.64e-12 | 6 |
embryonic cell | 5.36e-09 | 70 |
striatum neuron | 2.04e-08 | 3 |
granule cell | 1.42e-07 | 3 |
neuron of the ventral spinal cord | 1.57e-07 | 3 |
hippocampal neuron | 6.28e-07 | 3 |
raphe nuclei neuron | 7.98e-07 | 3 |