FFCP PHASE1:Hg19::chr2:202563351..202563376,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:202563351..202563376,-
|short_description=p1@MPP4
|description=CAGE_peak_1_at_MPP4_5end
|association_with_transcript=0bp_to_ENST00000483841_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58538 | |EntrezGene=58538 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13680 | |HGNC=13680 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000483841_5end | |||
|cluster_id=chr2:202563351..202563376,- | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_1_at_MPP4_5end | |||
|id=chr2:202563351..202563376,- | |||
|ontology_enrichment_celltype=CL:0000222!3.98e-30!119;CL:0002139!1.38e-24!24;CL:0000055!6.90e-23!180;CL:0000359!5.87e-20!32;CL:0000192!1.61e-19!42;CL:0000514!1.61e-19!42;CL:0000071!5.44e-19!18;CL:0002546!5.44e-19!18;CL:0000680!1.11e-17!57;CL:0000056!1.11e-17!57;CL:0000355!1.11e-17!57;CL:0000187!1.07e-16!54;CL:0000115!1.09e-16!35;CL:0000183!1.82e-15!59;CL:0000220!1.52e-14!246;CL:0002321!3.39e-14!248;CL:0000213!6.36e-14!57;CL:0000215!6.36e-14!57;CL:0000393!9.44e-14!60;CL:0000211!9.44e-14!60;CL:0002078!2.49e-13!44;CL:0002620!2.28e-12!23;CL:0000057!1.08e-11!75;CL:0000144!6.98e-11!625;CL:0002539!8.03e-11!10;CL:1000413!2.00e-10!9;CL:0002371!9.35e-10!591;CL:0000548!1.76e-09!679;CL:0000004!1.76e-09!679;CL:0000255!1.76e-09!679;CL:0000012!3.37e-09!682;CL:0002543!1.02e-07!6;CL:0002544!1.08e-07!6;CL:0005020!3.82e-07!6;CL:0002138!3.82e-07!6;CL:0005022!3.82e-07!6;CL:0000048!5.17e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.23e-37;24!CL:0000071;4.08e-28;18!CL:0000115;1.49e-26;36!CL:0000359;1.11e-24;32!CL:0002539;1.55e-17;10!CL:1000413;1.65e-16;9!CL:0002078;3.72e-15;45!CL:0000192;5.95e-15;43!CL:0002543;4.63e-12;6!CL:0002544;5.04e-12;6!CL:0000213;7.33e-12;58!CL:0000215;7.33e-12;58!CL:0002138;4.94e-11;6!CL:0002620;1.32e-08;23!CL:0000187;1.39e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.86e-38,24;CL:0000222,3.50e-33,121;CL:0000115,3.43e-30,36;CL:0000071,9.43e-29,18;CL:0002546,9.43e-29,18;CL:0000359,4.31e-26,32;CL:0002078,2.82e-24,45;CL:0000213,5.06e-20,58;CL:0000215,5.06e-20,58;CL:0000192,3.60e-19,43;CL:0000514,3.60e-19,43;CL:0002539,1.48e-17,10;CL:1000413,7.17e-17,9;CL:0000680,4.39e-15,58;CL:0000056,4.39e-15,58;CL:0000355,4.39e-15,58;CL:0000187,1.90e-13,55;CL:0002321,5.70e-13,250;CL:0002543,3.35e-12,6;CL:0002544,3.69e-12,6;CL:0000393,1.84e-11,61;CL:0000211,1.84e-11,61;CL:0005020,3.25e-11,6;CL:0002138,3.25e-11,6;CL:0005022,3.25e-11,6;CL:0002620,2.17e-08,23;CL:0000076,3.79e-07,63;CL:0002618,9.36e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;4.08e-28;18!CL:0000514;5.95e-15;43!CL:0005022;4.94e-11;6!CL:0000355;2.23e-08;58!CL:0000222;1.62e-07;121 | |||
|ontology_enrichment_disease=DOID:2394!1.05e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.08e-09;14!DOID:0060084;5.04e-07;3!DOID:127;5.04e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.67e-09,14;DOID:0060084,4.92e-07,3;DOID:127,4.92e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000055!1.28e-41!69;UBERON:0002049!9.82e-39!79;UBERON:0007798!9.82e-39!79;UBERON:0001981!2.91e-35!60;UBERON:0007500!2.91e-35!60;UBERON:0004537!2.91e-35!60;UBERON:0006965!2.91e-35!60;UBERON:0001637!2.67e-32!42;UBERON:0003509!2.67e-32!42;UBERON:0004572!2.67e-32!42;UBERON:0004535!9.95e-28!110;UBERON:0004573!1.77e-27!33;UBERON:0004571!1.77e-27!33;UBERON:0001009!3.56e-27!113;UBERON:0004872!8.98e-27!84;UBERON:0000490!2.24e-20!138;UBERON:0001986!5.44e-19!18;UBERON:0004638!5.44e-19!18;UBERON:0004852!5.44e-19!18;UBERON:0003914!5.77e-19!118;UBERON:0000487!6.02e-18!22;UBERON:0000947!6.44e-18!21;UBERON:0010191!6.44e-18!21;UBERON:0004290!2.02e-16!70;UBERON:0001134!1.27e-15!61;UBERON:0002036!1.27e-15!61;UBERON:0003082!1.27e-15!61;UBERON:0006914!7.66e-15!25;UBERON:0002385!1.06e-14!63;UBERON:0001015!1.06e-14!63;UBERON:0000383!1.06e-14!63;UBERON:0000914!1.34e-13!83;UBERON:0002329!1.34e-13!83;UBERON:0003077!1.34e-13!83;UBERON:0003059!1.34e-13!83;UBERON:0007282!1.34e-13!83;UBERON:0009618!1.34e-13!83;UBERON:0007285!1.34e-13!83;UBERON:0000486!6.45e-12!82;UBERON:0004237!8.03e-11!10;UBERON:0004695!8.03e-11!10;UBERON:0002111!8.03e-11!10;UBERON:0004178!8.03e-11!10;UBERON:0003915!2.00e-10!9;UBERON:0004700!2.00e-10!9;UBERON:0001917!2.00e-10!9;UBERON:0001135!9.62e-10!15;UBERON:0001473!1.20e-08!8;UBERON:0004536!1.20e-08!8;UBERON:0006558!1.20e-08!8;UBERON:0002199!1.24e-07!45;UBERON:0002416!1.24e-07!45;UBERON:0000119!3.14e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.32e-33;33!UBERON:0004571;1.32e-33;33!UBERON:0001637;1.71e-29;42!UBERON:0003509;1.71e-29;42!UBERON:0004572;1.71e-29;42!UBERON:0004638;4.08e-28;18!UBERON:0001986;4.08e-28;18!UBERON:0004852;4.08e-28;18!UBERON:0000055;1.87e-26;65!UBERON:0007500;1.93e-26;56!UBERON:0001981;1.93e-26;56!UBERON:0004537;1.93e-26;56!UBERON:0000947;1.10e-25;21!UBERON:0010191;1.10e-25;21!UBERON:0000487;3.47e-25;22!UBERON:0006914;1.73e-21;25!UBERON:0002049;8.37e-20;75!UBERON:0007798;8.37e-20;75!UBERON:0000490;8.61e-18;33!UBERON:0004237;1.55e-17;10!UBERON:0004695;1.55e-17;10!UBERON:0002111;1.55e-17;10!UBERON:0004178;1.55e-17;10!UBERON:0003914;1.99e-17;74!UBERON:0003915;1.65e-16;9!UBERON:0004700;1.65e-16;9!UBERON:0001917;1.65e-16;9!UBERON:0001135;7.02e-11;15!UBERON:0001473;7.57e-11;8!UBERON:0004536;7.57e-11;8!UBERON:0006558;7.57e-11;8!UBERON:0004535;3.52e-10;109!UBERON:0000025;6.68e-10;93!UBERON:0001009;2.45e-09;112!UBERON:0002465;2.00e-08;10!UBERON:0001638;1.04e-07;9!UBERON:0003920;1.04e-07;9!UBERON:0004582;1.04e-07;9!UBERON:0002119;1.66e-07;4!UBERON:0004111;4.55e-07;130!UBERON:0010260;7.85e-07;9 | |||
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|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,0,0.631719873426831,0,0.491467873003018,0,0,0,0,0,2.01697543935533,3.61616716814386,4.38186054232424,6.34312638427659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0.263504357079378,0,0,0,0,0,0,0,0,0,10.136882775702,10.3228151412735,4.85996702250632,1.69592382577203,2.51699661725944,1.92582629358047,3.76190939766259,5.94358546089456,5.33649394030065,7.36385348082274,6.8480983908555,0.760272105718513,1.95249646038536,6.25027236587977,2.43042584364528,5.44728342532887,2.69435247151404,2.47745257063309,3.06633274931766,10.4419222552494,4.39684185432977,0,0,0,0,1.01304409331664,3.83986624358335,0.286836620748814,0.354668382198357,0,1.06748995729705,0,0,0.404132016209064,0.653847612453835,0.454072282934794,0,0.468642863667593,0.312160076830321,2.2818872861778,0.448346041655403,0.469737994575059,0,0,0,0,0,0,0,2.73048408581408,0.718618141816238,0.168336113954066,0,0.554128230968366,0,0,0,0.113432183160021,4.12596162084383,1.06778694409284,0.847727604638247,3.30100205692843,1.03052529238439,2.31876486041066,0.744467425326359,1.35021065793013,0.0974370051611986,2.27190396819703,1.01254888506529,0,2.4850671476163,1.61203357164224,2.20428770003634,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0.463721619900307,0.469634776943287,1.73239737313289,1.38895653772983,1.52203321787679,0,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0.43596006883328,2.2001485746285,3.36106460970222,0,1.690605505112,0.26593811658487,1.04007436911366,0,0,0.532844358032199,0,0,0,0.65147236858747,0,0,0.602878754119172,0,0,0,0,0,0.958499421966331,0,0,2.17171960001369,0,3.58121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07057393278297,0.788512075169673,0.702848489956279,0,0,0,0,0,0.60818530127658,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0.321707842287215,0,4.31787142647436,3.55123450626254,2.38168752440047,4.67328986265259,0.813472649219715,0,0.200506470303285,0,0,0.546273504020151,0,0,0,0,0,0,1.13733384070897,6.46356080050759,2.15915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0.15350367472613,0.137836572484531,0,0,0.170453254832202,0.0890320356467374,0,0,0,0,1.39453664789186,5.35180989612088,1.3940745403212,1.23213432070436,2.66153015158511,4.34966496037536,6.67167188774112,1.86062352764589,1.116475108079,0,0,0,0,2.54562598340749,2.35484592059769,0.179872457583315,0.274537029736055,0.706874414074119,1.81964233415984,1.58510321173008,0.421258456238981,0,0.974853958525138,1.05650146756755,0.9554993798559,0.141405431953713,0,1.10273068709225,1.99031692572366,2.19225442626881,0,0,2.02910376962704,0.6196469961995,1.12678241012897,0.860468113224309,0,1.78335525740625,1.06428319221179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56377770705936,0,0,0,0,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.0260748636746,0,0,0,0,0,1.8922479853894,0,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0.227884111694002,0,0,0,0,1.74035427463538,0,0,0,0,0,0,0,0,0,0,0,0,51.2841076188756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0.941798755221676,0,0,0.416024019039416,0,0,0,0,0,0,0,0,0,0,66.212357048696,2.60379656828827,0.596143835108969,0,0,0,0,0,0,0,0,0,0.248505071130865,0,2.31037150325144,1.98745407993433,0,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0.134366944973453,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537862017998534,0,0,0,0,3.80099721227599,4.32110745600634,5.22539776175055,2.39460383124975,0,2.21504428321048,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0.276697269872462,0.249960815924213,0.151649117541648,0,0,0,0,2.08956724041624,0.701139929541673,1.10961172300523,0.189403005275089,0,0.889811221596536,0,0.151230923763239,0.932623203496683,1.47855149989634,2.07085797312813,1.34940933649081,1.24210365501008,4.14706207840855,3.72178400381193,2.60872530905867,0.150257608997218,0,1.22061219961398,3.45512452484863,0.966695013382396,0.928067519756987,1.99047944349308,2.00013882331577,0,0,0,1.15571898244382,0,0,0.226705925512272,0.231522474323834,0,4.11904334487421,0.617602894321944,0.219284049578707,0.706756583783524,1.15748422962549,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0.567515953566836,0.736423801007363,0,0,0.255788742607303,0.215649622793364,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,1.3807198521202,0,0,0.40341013740704,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444925607568277,0,0,0,0,0,0,68.9748651304734,0,0,0,0,0,0,0,0,1.30165200803622,0.937347452350735,0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| ||
|short_description=p1@MPP4 | |||
}} | }} |
Latest revision as of 13:55, 19 September 2015
Short description: | p1@MPP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MPP4_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000483841_5end |
EntrezGene: | MPP4 |
HGNC: | 13680 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.86e-38 | 24 |
mesodermal cell | 3.50e-33 | 121 |
endothelial cell | 3.43e-30 | 36 |
blood vessel endothelial cell | 9.43e-29 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.43e-29 | 18 |
vascular associated smooth muscle cell | 4.31e-26 | 32 |
meso-epithelial cell | 2.82e-24 | 45 |
lining cell | 5.06e-20 | 58 |
barrier cell | 5.06e-20 | 58 |
smooth muscle cell | 3.60e-19 | 43 |
smooth muscle myoblast | 3.60e-19 | 43 |
aortic smooth muscle cell | 1.48e-17 | 10 |
endothelial cell of artery | 7.17e-17 | 9 |
muscle precursor cell | 4.39e-15 | 58 |
myoblast | 4.39e-15 | 58 |
multi-potent skeletal muscle stem cell | 4.39e-15 | 58 |
muscle cell | 1.90e-13 | 55 |
embryonic cell | 5.70e-13 | 250 |
vein endothelial cell | 3.35e-12 | 6 |
aortic endothelial cell | 3.69e-12 | 6 |
electrically responsive cell | 1.84e-11 | 61 |
electrically active cell | 1.84e-11 | 61 |
lymphangioblast | 3.25e-11 | 6 |
endothelial cell of lymphatic vessel | 3.25e-11 | 6 |
vascular lymphangioblast | 3.25e-11 | 6 |
skin fibroblast | 2.17e-08 | 23 |
squamous epithelial cell | 3.79e-07 | 63 |
endothelial cell of umbilical vein | 9.36e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.67e-09 | 14 |
cell type benign neoplasm | 4.92e-07 | 3 |
leiomyoma | 4.92e-07 | 3 |