FFCP PHASE1:Hg19::chr2:201450665..201450680,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:201450665..201450680,+
|short_description=p4@AOX1
|description=CAGE_peak_4_at_AOX1_5end
|association_with_transcript=-50bp_to_NM_001159,uc002uvx.2_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=316 | |EntrezGene=316 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=553 | |HGNC=553 | ||
|TSSclassifier=strong | |||
|UniProt=Q06278 | |UniProt=Q06278 | ||
|association_with_transcript=-50bp_to_NM_001159,uc002uvx.2_5end | |||
|cluster_id=chr2:201450665..201450680,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_AOX1_5end | |||
|id=chr2:201450665..201450680,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.36e-12!180;CL:0000057!2.66e-11!75;CL:0000136!9.95e-11!15;CL:0000680!9.18e-08!57;CL:0000056!9.18e-08!57;CL:0000355!9.18e-08!57;CL:0002620!7.90e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.46e-16;13!CL:0002551;6.83e-13;6!CL:0000188;3.85e-10;9!CL:0000680;4.90e-10;7!CL:0002615;5.42e-08;3!CL:0002521;8.38e-08;3!CL:0002623;1.54e-07;3!CL:0002559;4.11e-07;5!CL:0000594;5.80e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.81e-14,15;CL:0002551,4.00e-13,6;CL:0000188,1.47e-10,9;CL:0002615,5.46e-08,3;CL:0002521,8.54e-08,3;CL:0002623,1.51e-07,3;CL:0000594,3.80e-07,3;CL:0002559,3.85e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.86e-12!216;UBERON:0000914!5.43e-12!83;UBERON:0002329!5.43e-12!83;UBERON:0003077!5.43e-12!83;UBERON:0003059!5.43e-12!83;UBERON:0007282!5.43e-12!83;UBERON:0009618!5.43e-12!83;UBERON:0007285!5.43e-12!83;UBERON:0000475!5.49e-12!365;UBERON:0005256!3.45e-11!143;UBERON:0004290!8.11e-11!70;UBERON:0000481!3.67e-10!347;UBERON:0000486!2.30e-09!82;UBERON:0000468!1.22e-08!659;UBERON:0007023!1.27e-08!115;UBERON:0003104!4.36e-08!238;UBERON:0009142!4.36e-08!238;UBERON:0002385!1.25e-07!63;UBERON:0001015!1.25e-07!63;UBERON:0000383!1.25e-07!63;UBERON:0001134!4.21e-07!61;UBERON:0002036!4.21e-07!61;UBERON:0003082!4.21e-07!61;UBERON:0004457!7.52e-07!12;UBERON:0000042!7.52e-07!12;UBERON:0002067!9.54e-07!9;UBERON:0004016!9.54e-07!9;UBERON:0010083!9.54e-07!9;UBERON:0003102!9.98e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;5.68e-14;9!UBERON:0004457;1.30e-11;9!UBERON:0000042;1.30e-11;9!UBERON:0003688;2.46e-09;6!UBERON:0002358;2.46e-09;6!UBERON:0003684;2.46e-09;6!UBERON:0001178;2.46e-09;6!UBERON:0001134;1.36e-08;16!UBERON:0002036;1.36e-08;16!UBERON:0002190;8.38e-08;3!UBERON:0006947;2.01e-07;3!UBERON:0004054;2.01e-07;3!UBERON:0002073;4.11e-07;5!UBERON:0001013;7.36e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,3.29e-14,9;UBERON:0004016,3.29e-14,9;UBERON:0010083,3.29e-14,9;UBERON:0005256,2.45e-11,122;UBERON:0002100,4.31e-10,199;UBERON:0003104,2.36e-09,160;UBERON:0009142,2.36e-09,160;UBERON:0002329,3.31e-09,71;UBERON:0003059,3.31e-09,71;UBERON:0007282,3.31e-09,71;UBERON:0004290,3.31e-09,71;UBERON:0009618,3.31e-09,71;UBERON:0003688,3.49e-09,6;UBERON:0002358,3.49e-09,6;UBERON:0003684,3.49e-09,6;UBERON:0001178,3.49e-09,6;UBERON:0003077,5.34e-09,72;UBERON:0007285,5.34e-09,72;UBERON:0000486,6.48e-09,83;UBERON:0007524,8.48e-09,73;UBERON:0004457,2.66e-08,12;UBERON:0000042,2.66e-08,12;UBERON:0007503,7.09e-08,78;UBERON:0002190,8.54e-08,3;UBERON:0004923,1.48e-07,66;UBERON:0006947,1.80e-07,3;UBERON:0004054,1.80e-07,3;UBERON:0002073,3.85e-07,5;UBERON:0005086,3.85e-07,5;UBERON:0002199,6.53e-07,46;UBERON:0002416,6.53e-07,46;UBERON:0001013,8.67e-07,14 | |||
|phase1_expression=4.90531624030503,5.35251309727458,5.3562673556469,7.00513088471913,5.81049422755474,5.23403114460221,2.53299878168311,7.58063848112197,10.1862394997937,0,0,0,0,0.123766352960047,2.31978163009541,0,0,0.730310090387373,0.487932798790507,0.246242116153576,0.612002073732759,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.12786256184353,0.361439152384566,1.00267582127178,0.434539556882471,0,0,0.189069634328136,0.443458794925128,0,1.63723844372141,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0,0,0.560677600142307,0,0,0.933633106199299,0.538842688278752,0.326923806226917,0,0,0.234321431833797,3.43376084513353,7.41613368007784,2.83952493048422,1.40921398372518,2.91371299862637,3.93262258766296,1.83738754129404,0.491337269247072,1.13658359293342,2.37600571456411,0.247266929278557,0.910161361938026,0,0.673344455816265,0.625592599359821,1.93944880838928,0,0.30648779579902,0.600952235626387,0,0.358779271377724,0.427114777637135,1.27159140695737,0,0.206105058476878,0.772921620136887,0.558350568994769,0.168776332241266,0.0974370051611986,0.757301322732344,1.01254888506529,0,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0.36497735907583,0,1.28648187638577,1.38134921352481,4.64367928031979,11.5500717067134,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,38.0265104465493,63.8837690840457,35.4473944008842,0,0,1.3725424823882,0.109750285408626,0,0.100528972411631,0.555530670951178,0,0,0,0.115930404975077,0,0.433099343283221,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,0,0.51336800074665,0.129271715757778,0,0,0,1.04007436911366,0.771622122786426,0,0.532844358032199,1.00084595560703,8.68194568626309,0.823240336780769,1.30294473717494,2.48774364119782,2.37585561880029,1.80863626235752,0,1.09970290300263,0,0,0,0,0,1.42636905040718,2.75084482668401,1.2328579353023,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0.542530047399471,0.415941723061614,0.178428988797162,0.315404830067869,1.99140405487612,1.80567659836631,0,0,0,0,0.434418072340414,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0.992431231275107,2.91577749247319,0.561320188866147,1.02511319404561,2.55853624533352,0.804269605718038,5.93672265779964,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0.459257792658427,0,0.393373244878272,0,0.231046011313244,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0,6.80070676874967,0,0,0,0,0,0.096670718292122,1.69453478826109,1.84204409671355,2.75673144969061,2.57808587683857,3.62541734785571,1.87498580315422,0,0.661139661443912,0,0.893288987462089,0.50578890427775,0,0.62962469366128,2.7881490806424,0,0,0,0,0,0,0.316379424718726,1.5250415513906,0.255897791311334,0.42793898803392,0.318203247925937,0,0.539617372749944,0.54907405947211,0.353437207037059,0,0,0.421258456238981,0.48763373908959,0.243713489631284,0,0.409499734223957,0,1.13008116620243,0,0.66343897524122,0.438450885253763,0,1.9676842561399,0,0.30982349809975,0,1.29070216983646,0.294747123039363,0,0.354761064070598,4.43326034125095,3.95153871551882,0,0.349934720244983,0.384888450902048,0,0,9.97924288233859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.887790650732402,0,1.11136990144637,0.969332746095218,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.438770794307945,0,0,1.23120413606075,0,0,0,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,1.22206028986725,0,0,0,0.471807930864739,0,0,0,0,0,3.15667522279512,1.20990716048664,0,1.45329133145522,0,0,0,0,0,0,0,0,0,0,0,2.97035336011451,0.171986032471617,0,0,0,0.581934098930517,0,0.677942222341597,0,0,0.0633107959558787,0,0.320635281006135,1.70762395791482,0,0,0,0,0,0.49701014226173,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0.199679000498991,0,0.223171457441873,0.0671834724867263,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0,0,0,0.272406812223151,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0.0607495566580247,0,4.64953673065269,0.104909176269996,0,0,0,2.1440859791201,0.662091970365432,0,0,0,0,0,0,0,0,21.1035216496439,0,0,0,0,0,0.320362237703084,0.471612915298998,0.828478110694391,2.48083010905975,0,0,0,1.63205341010842,0.5013797880454,0,0.655745261419609,0,0,0,0.1251909307065,0,0.443716206147409,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0.233713309847224,0,0.568209015825267,1.25783950876288,2.66943366478961,0,1.05861646634267,0,0,0,0,0,0.414706207840855,0,0.521745061811734,0,1.14241563650639,0,0,0.429642228169954,0,0,0,0.68679141036558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| ||
|short_description=p4@AOX1 | |||
}} | }} |
Latest revision as of 10:37, 19 September 2015
Short description: | p4@AOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AOX1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -50bp_to_NM_001159, uc002uvx.2_5end |
EntrezGene: | AOX1 |
HGNC: | 553 |
UniProt: | Q06278 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.81e-14 | 15 |
fibroblast of dermis | 4.00e-13 | 6 |
cell of skeletal muscle | 1.47e-10 | 9 |
adipocyte of omentum tissue | 5.46e-08 | 3 |
subcutaneous fat cell | 8.54e-08 | 3 |
acinar cell of salivary gland | 1.51e-07 | 3 |
skeletal muscle satellite cell | 3.80e-07 | 3 |
hair follicle cell | 3.85e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
dermis | 3.29e-14 | 9 |
dermatome | 3.29e-14 | 9 |
future dermis | 3.29e-14 | 9 |
trunk mesenchyme | 2.45e-11 | 122 |
trunk | 4.31e-10 | 199 |
mesenchyme | 2.36e-09 | 160 |
entire embryonic mesenchyme | 2.36e-09 | 160 |
somite | 3.31e-09 | 71 |
presomitic mesoderm | 3.31e-09 | 71 |
presumptive segmental plate | 3.31e-09 | 71 |
dermomyotome | 3.31e-09 | 71 |
trunk paraxial mesoderm | 3.31e-09 | 71 |
omentum | 3.49e-09 | 6 |
peritoneum | 3.49e-09 | 6 |
abdominal cavity | 3.49e-09 | 6 |
visceral peritoneum | 3.49e-09 | 6 |
paraxial mesoderm | 5.34e-09 | 72 |
presumptive paraxial mesoderm | 5.34e-09 | 72 |
multilaminar epithelium | 6.48e-09 | 83 |
dense mesenchyme tissue | 8.48e-09 | 73 |
cavity lining | 2.66e-08 | 12 |
serous membrane | 2.66e-08 | 12 |
epithelial vesicle | 7.09e-08 | 78 |
subcutaneous adipose tissue | 8.54e-08 | 3 |
organ component layer | 1.48e-07 | 66 |
male genital duct | 1.80e-07 | 3 |
internal male genitalia | 1.80e-07 | 3 |
hair follicle | 3.85e-07 | 5 |
hair follicle placode | 3.85e-07 | 5 |
integument | 6.53e-07 | 46 |
integumental system | 6.53e-07 | 46 |
adipose tissue | 8.67e-07 | 14 |