FFCP PHASE1:Mm9::chr16:31428850..31428923,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71911 | |EntrezGene=71911 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |MCL_coexpression_id=12 | ||
|TSSclassifier=NA | |||
|UniProt=Q80XN0 | |UniProt=Q80XN0 | ||
|association_with_transcript=11bp_to_NM_001122683,uc007yxj.2,uc007yxk.2_5end | |association_with_transcript=11bp_to_NM_001122683,uc007yxj.2,uc007yxk.2_5end | ||
|cluster_id=chr16:31428850..31428923,+ | |||
|description=CAGE_peak_1_at_Bdh1_5end | |description=CAGE_peak_1_at_Bdh1_5end | ||
|id=chr16:31428850..31428923,+ | |id=chr16:31428850..31428923,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.80e-09!23;CL:0000337!1.80e-09!23;CL:0002563!4.37e-07!9;CL:0002251!4.37e-07!9;CL:0002319!6.77e-07!43;CL:0000221!7.02e-07!44;CL:0000133!7.02e-07!44 | |ontology_enrichment_celltype=CL:0000117!1.80e-09!23;CL:0000337!1.80e-09!23;CL:0002563!4.37e-07!9;CL:0002251!4.37e-07!9;CL:0002319!6.77e-07!43;CL:0000221!7.02e-07!44;CL:0000133!7.02e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.77e-09,23;CL:0000337,1.77e-09,23;CL:0002563,4.31e-07,9;CL:0002251,4.31e-07,9;CL:0002319,6.68e-07,43;CL:0000221,6.92e-07,44;CL:0000133,6.92e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000064!1.10e-14!99;UBERON:0002020!1.38e-13!34;UBERON:0001049!5.07e-13!52;UBERON:0005068!5.07e-13!52;UBERON:0006241!5.07e-13!52;UBERON:0007135!5.07e-13!52;UBERON:0001017!5.97e-13!73;UBERON:0005743!5.97e-13!73;UBERON:0000073!1.15e-12!75;UBERON:0001016!1.15e-12!75;UBERON:0000955!1.68e-11!50;UBERON:0006238!1.68e-11!50;UBERON:0002616!2.90e-11!49;UBERON:0002791!4.13e-11!29;UBERON:0003528!4.13e-11!29;UBERON:0001893!4.13e-11!29;UBERON:0000033!1.22e-10!63;UBERON:0004121!2.62e-10!102;UBERON:0000924!2.62e-10!102;UBERON:0006601!2.62e-10!102;UBERON:0000160!3.00e-10!43;UBERON:0000344!4.45e-10!15;UBERON:0007811!5.98e-10!86;UBERON:0005409!1.36e-09!59;UBERON:0003080!3.06e-09!40;UBERON:0002780!4.50e-09!39;UBERON:0001890!4.50e-09!39;UBERON:0006240!4.50e-09!39;UBERON:0000956!6.50e-09!21;UBERON:0001869!6.50e-09!21;UBERON:0000203!6.50e-09!21;UBERON:0001242!7.49e-09!13;UBERON:0000060!7.49e-09!13;UBERON:0001262!7.49e-09!13;UBERON:0004786!7.49e-09!13;UBERON:0000153!8.52e-09!94;UBERON:0002346!1.74e-08!71;UBERON:0003075!1.74e-08!71;UBERON:0007284!1.74e-08!71;UBERON:0003056!1.79e-08!49;UBERON:0002619!1.69e-07!17;UBERON:0003350!4.37e-07!9;UBERON:0004808!4.37e-07!9;UBERON:0001277!4.37e-07!9 | |ontology_enrichment_uberon=UBERON:0000064!1.10e-14!99;UBERON:0002020!1.38e-13!34;UBERON:0001049!5.07e-13!52;UBERON:0005068!5.07e-13!52;UBERON:0006241!5.07e-13!52;UBERON:0007135!5.07e-13!52;UBERON:0001017!5.97e-13!73;UBERON:0005743!5.97e-13!73;UBERON:0000073!1.15e-12!75;UBERON:0001016!1.15e-12!75;UBERON:0000955!1.68e-11!50;UBERON:0006238!1.68e-11!50;UBERON:0002616!2.90e-11!49;UBERON:0002791!4.13e-11!29;UBERON:0003528!4.13e-11!29;UBERON:0001893!4.13e-11!29;UBERON:0000033!1.22e-10!63;UBERON:0004121!2.62e-10!102;UBERON:0000924!2.62e-10!102;UBERON:0006601!2.62e-10!102;UBERON:0000160!3.00e-10!43;UBERON:0000344!4.45e-10!15;UBERON:0007811!5.98e-10!86;UBERON:0005409!1.36e-09!59;UBERON:0003080!3.06e-09!40;UBERON:0002780!4.50e-09!39;UBERON:0001890!4.50e-09!39;UBERON:0006240!4.50e-09!39;UBERON:0000956!6.50e-09!21;UBERON:0001869!6.50e-09!21;UBERON:0000203!6.50e-09!21;UBERON:0001242!7.49e-09!13;UBERON:0000060!7.49e-09!13;UBERON:0001262!7.49e-09!13;UBERON:0004786!7.49e-09!13;UBERON:0000153!8.52e-09!94;UBERON:0002346!1.74e-08!71;UBERON:0003075!1.74e-08!71;UBERON:0007284!1.74e-08!71;UBERON:0003056!1.79e-08!49;UBERON:0002619!1.69e-07!17;UBERON:0003350!4.37e-07!9;UBERON:0004808!4.37e-07!9;UBERON:0001277!4.37e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.85e-16,31;UBERON:0000073,1.22e-13,54;UBERON:0002020,1.34e-13,34;UBERON:0005409,3.24e-13,47;UBERON:0004121,4.88e-13,95;UBERON:0000924,4.88e-13,95;UBERON:0006601,4.88e-13,95;UBERON:0001049,4.92e-13,52;UBERON:0005068,4.92e-13,52;UBERON:0006241,4.92e-13,52;UBERON:0007135,4.92e-13,52;UBERON:0001017,5.80e-13,73;UBERON:0001016,1.12e-12,75;UBERON:0010371,4.59e-12,73;UBERON:0002346,1.54e-11,64;UBERON:0003075,1.54e-11,64;UBERON:0007284,1.54e-11,64;UBERON:0003528,4.03e-11,29;UBERON:0002791,4.03e-11,29;UBERON:0001893,4.03e-11,29;UBERON:0000955,1.00e-10,47;UBERON:0006238,1.00e-10,47;UBERON:0002616,1.72e-10,46;UBERON:0000344,4.35e-10,15;UBERON:0011216,5.20e-10,194;UBERON:0003080,3.00e-09,40;UBERON:0002780,4.42e-09,39;UBERON:0001890,4.42e-09,39;UBERON:0006240,4.42e-09,39;UBERON:0000956,6.37e-09,21;UBERON:0001869,6.37e-09,21;UBERON:0000203,6.37e-09,21;UBERON:0001242,7.35e-09,13;UBERON:0001262,7.35e-09,13;UBERON:0004786,7.35e-09,13;UBERON:0003056,1.76e-08,49;UBERON:0002619,1.66e-07,17;UBERON:0003350,4.31e-07,9;UBERON:0004808,4.31e-07,9;UBERON:0001277,4.31e-07,9 | |||
|phase1_expression=15.6945870162698,248.819465646864,267.539552761047,225.033373212282,244.938011943764,160.82834249159,169.602777072352,28.6653778040299,19.42884365693,27.3855495796732,28.2509647572083,25.7664073554937,41.2593759134206,36.1046261990459,8.99396356902289,9.51633756732182,6.99561878128147,8.3597473819933,9.73512478600745,3.81950686618227,16.1582251287033,31.6738134330824,42.0531660513686,175.031710535987,176.874555702788,233.138177430698,244.242051822195,217.195002547376,105.272974378831,94.763328789734,128.381965669421,0.635030673459631,0,0,138.071074241109,177.206131952153,151.493662346678,0.418531630736908,0,0.523523743973798,0,0,0.485510353031154,0.125896817975577,0.101376931219515,0.183546752161682,12.5182615095686,99.2014461531032,51.8459391253353,41.2191386037481,59.4942291907791,152.37771822687,7.21465206048266,36.9934692425786,34.2815675125313,5.40244815675489,2.0057340795713,5.15672092277442,62.1111534838965,76.1747010151727,74.158274210223,18.9752937958714,21.3430751066673,0.449949858640699,0.988866362566974,0.7104801149461,39.8468146989478,64.9328935993427,88.8619977483654,95.7192102771687,95.277207492176,156.536739453284,152.620161797565,81.2113998795145,70.4464211984037,79.9720344350718,51.7544640697127,41.7537595538564,47.4644187761792,69.5040736338122,67.7923439093856,58.3422975023571,60.0243447852969,39.9561453122493,46.4506673241503,101.941490573889,97.9517163897828,77.9149683549756,17.7956554332983,12.0158780569789,0.869593466105033,0,0,0,0,0,27.1057730854281,0,0,0,23.802537942259,0,0,0,13.2059535016841,14.6948721975557,12.6381111253696,30.7154636444271,7.25026074212081,1.48442139064825,7.28638372417771,6.69824052286711,4.38169444786511,7.83757730873637,3.17489509266403,1.50799909595611,14.0901131608593,1.59059292611903,12.3845477272982,7.92657564742305,6.40440403535141,6.30337829075789,169.616502708491,47.4304891158706,54.0372503578714,113.422932512615,1.67741174308288,0.599902730993408,1.01656181658452,36.5489160147767,34.312545211397,87.078466014215,37.3722288413394,47.3073596061111,35.7395436642443,47.536690078853,2.13862664085664,8.58408097209642,11.8779696463827,121.214508990609,5.59517904739626,11.4951052216736,13.6847218652065,14.6183673300644,13.8114093277196,15.7579875950365,23.144325966253,55.6212247088884,7.11374376678379,8.32066752738405,13.0203831881322,11.3981780862339,16.1267404550847,15.3230953269753,16.6683530490434,4.77682240364384,0.702213187313235,0.257347907114715,0.568326998791185,10.7705401718461,5.62862543954631,7.74266864282364,4.7348947117042,4.72234156193769,3.39387648352232,5.11574678450897,7.51165523918934,4.55384835231961,0.658239399653922,0.656669856316381,0.486412857275134,0.438599962275997,11.1970558798436,34.0884303651344,37.8521907415429,82.117880678669,91.8564216694958,125.614019165184,5.33220626338085,7.19933682767359,46.0056836919873,135.531328546886,206.144446644195,230.553458848422,132.393608170919,215.920329643178,184.731378468198,184.432649582147,170.983504403468,111.453606673123,119.308203530831,107.934570103867,6.82804443431094,6.16941968092536,18.0332377076929,15.4775009162439,28.3170631264734,27.9841921362371,18.7812515259044,48.2685183893299,46.9426196245711,48.248291093424,0.592905254174298,5.17219827719892,7.46924181430171,6.2961391467759,6.8972441272091,7.47649195232492,9.93040821947537,6.61701116136864,2.10775794807546,2.47105271869273,0,1.11642284300551,1.24815069245824,0.252578877947112,1.79397413521912,0,3.69506380333209,4.16881105895066,3.7481944581666,1.69745085775188,1.87752198630802,1.67506257441816,1.19021820443007,1.36593553500459,1.26108115284953,1.55025282754142,1.2756381492599,3.11340297959902,1.89953480052485,2.16973587872267,4.52373851817817,6.52686820582452,78.6822836830458,34.7680300343963,45.7569181465207,50.8698719810162,0,6.05930225290495,15.4599027513966,10.9322848403059,13.3562506594335,3.34556317133573,6.23836287430704,5.66153061577665,5.66734982344852,9.35218745316198,7.51046778098395,44.3423416662094,4.25820255624806,2.13678724400706,3.74640006513225,3.79431282836832,5.30980553359851,3.8844901784797,15.1161778482376,19.6149282946134,16.5369060013233,15.9866276930842,57.3710810833451,5.08947221268508,11.0514187299264,8.84902922220285,6.32511651449993,4.12542172992747,13.6175842301515,6.84232157318979,10.3486947026204,12.8602221018955,15.2512600932355,18.9070946658195,15.6321569572015,15.8321773539592,9.62154003061212,11.0152676849186,8.15955072803359,18.3023740765043,13.724476269152,21.1698366497827,33.3048839768751,38.0806887408542,124.753798077576,40.0518652342701,7.17657699350981,5.57244543500701,7.40778109478847,3.39063222608444,6.83471138605126,7.0921233694022,0.849892149969277,3.07893195112048,2.21119958087078,78.2829906772393,4.74503990371703,17.485474172909,42.3380936021461,44.7448953470963,74.4616342374466,53.8108742075435,44.8808264588574,84.8089252028256,176.665208596714,14.2908042009993,6.76431526421028,9.12050930868271,10.5893433892542,6.80579159204167,8.52454834953025,8.10989402355735,8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| ||
|short_description=p1@Bdh1 | |short_description=p1@Bdh1 | ||
}} | }} |
Latest revision as of 21:01, 1 October 2015
Short description: | p1@Bdh1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Bdh1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 11bp_to_NM_001122683, uc007yxj.2, uc007yxk.2_5end |
EntrezGene: | Bdh1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.77e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.77e-09 | 23 |
intestinal epithelial cell | 4.31e-07 | 9 |
epithelial cell of alimentary canal | 4.31e-07 | 9 |
neural cell | 6.68e-07 | 43 |
ectodermal cell | 6.92e-07 | 44 |
neurectodermal cell | 6.92e-07 | 44 |