FFCP PHASE1:Hg19::chr2:181845134..181845154,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:181845134..181845154,+
|short_description=p6@UBE2E3
|description=CAGE_peak_6_at_UBE2E3_5end
|association_with_transcript=16bp_to_ENST00000414657_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10477 | |EntrezGene=10477 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12479 | |HGNC=12479 | ||
|TSSclassifier=strong | |||
|UniProt=C9IZU6 | |UniProt=C9IZU6 | ||
|association_with_transcript=16bp_to_ENST00000414657_5end | |||
|cluster_id=chr2:181845134..181845154,+ | |||
|description=CAGE_peak_6_at_UBE2E3_5end | |||
|id=chr2:181845134..181845154,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.15e-27!180;CL:0000057!2.09e-20!75;CL:0000222!1.04e-09!119;CL:0002620!7.34e-09!23;CL:0000183!7.13e-08!59;CL:0000680!1.62e-07!57;CL:0000056!1.62e-07!57;CL:0000355!1.62e-07!57;CL:0000220!4.73e-07!246;CL:0000187!5.84e-07!54;CL:0002321!9.36e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.88e-09;23!CL:0000057;1.05e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.89e-22,76;CL:0000222,3.20e-10,121;CL:0002620,2.35e-09,23;CL:0000680,8.42e-09,58;CL:0000056,8.42e-09,58;CL:0000355,8.42e-09,58;CL:0000187,3.55e-08,55;CL:0000136,3.97e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.01e-12!143;UBERON:0000475!2.43e-12!365;UBERON:0000914!1.15e-11!83;UBERON:0002329!1.15e-11!83;UBERON:0003077!1.15e-11!83;UBERON:0003059!1.15e-11!83;UBERON:0007282!1.15e-11!83;UBERON:0009618!1.15e-11!83;UBERON:0007285!1.15e-11!83;UBERON:0003104!6.42e-11!238;UBERON:0009142!6.42e-11!238;UBERON:0000481!7.40e-11!347;UBERON:0003102!1.15e-10!95;UBERON:0002100!9.65e-10!216;UBERON:0004290!1.20e-09!70;UBERON:0000486!3.32e-09!82;UBERON:0000490!8.62e-09!138;UBERON:0002199!4.04e-08!45;UBERON:0002416!4.04e-08!45;UBERON:0001134!5.13e-08!61;UBERON:0002036!5.13e-08!61;UBERON:0003082!5.13e-08!61;UBERON:0002385!5.22e-08!63;UBERON:0001015!5.22e-08!63;UBERON:0000383!5.22e-08!63;UBERON:0003914!6.95e-08!118;UBERON:0000468!1.03e-07!659;UBERON:0000477!3.36e-07!286;UBERON:0002049!8.57e-07!79;UBERON:0007798!8.57e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.88e-07;25!UBERON:0002384;7.28e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,7.39e-13,122;UBERON:0003104,1.88e-12,160;UBERON:0009142,1.88e-12,160;UBERON:0007503,6.24e-12,78;UBERON:0002329,5.17e-11,71;UBERON:0003059,5.17e-11,71;UBERON:0007282,5.17e-11,71;UBERON:0004290,5.17e-11,71;UBERON:0009618,5.17e-11,71;UBERON:0000490,6.51e-11,148;UBERON:0007524,8.72e-11,73;UBERON:0003077,1.49e-10,72;UBERON:0007285,1.49e-10,72;UBERON:0003102,2.23e-10,99;UBERON:0000486,3.92e-10,83;UBERON:0001134,2.35e-09,62;UBERON:0002036,2.35e-09,62;UBERON:0003082,2.35e-09,62;UBERON:0002385,2.43e-09,64;UBERON:0001015,2.43e-09,64;UBERON:0000383,2.43e-09,64;UBERON:0002199,2.62e-09,46;UBERON:0002416,2.62e-09,46;UBERON:0002100,1.24e-08,199;UBERON:0003914,7.64e-08,117;UBERON:0002097,2.19e-07,41;UBERON:0007100,8.08e-07,27 | |||
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| ||
|short_description=p6@UBE2E3 | |||
}} | }} |
Latest revision as of 20:44, 18 September 2015
Short description: | p6@UBE2E3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_UBE2E3_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000414657_5end |
EntrezGene: | UBE2E3 |
HGNC: | 12479 |
UniProt: | C9IZU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.89e-22 | 76 |
mesodermal cell | 3.20e-10 | 121 |
skin fibroblast | 2.35e-09 | 23 |
muscle precursor cell | 8.42e-09 | 58 |
myoblast | 8.42e-09 | 58 |
multi-potent skeletal muscle stem cell | 8.42e-09 | 58 |
muscle cell | 3.55e-08 | 55 |
fat cell | 3.97e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 7.39e-13 | 122 |
mesenchyme | 1.88e-12 | 160 |
entire embryonic mesenchyme | 1.88e-12 | 160 |
epithelial vesicle | 6.24e-12 | 78 |
somite | 5.17e-11 | 71 |
presomitic mesoderm | 5.17e-11 | 71 |
presumptive segmental plate | 5.17e-11 | 71 |
dermomyotome | 5.17e-11 | 71 |
trunk paraxial mesoderm | 5.17e-11 | 71 |
unilaminar epithelium | 6.51e-11 | 148 |
dense mesenchyme tissue | 8.72e-11 | 73 |
paraxial mesoderm | 1.49e-10 | 72 |
presumptive paraxial mesoderm | 1.49e-10 | 72 |
surface structure | 2.23e-10 | 99 |
multilaminar epithelium | 3.92e-10 | 83 |
skeletal muscle tissue | 2.35e-09 | 62 |
striated muscle tissue | 2.35e-09 | 62 |
myotome | 2.35e-09 | 62 |
muscle tissue | 2.43e-09 | 64 |
musculature | 2.43e-09 | 64 |
musculature of body | 2.43e-09 | 64 |
integument | 2.62e-09 | 46 |
integumental system | 2.62e-09 | 46 |
trunk | 1.24e-08 | 199 |
epithelial tube | 7.64e-08 | 117 |
skin of body | 2.19e-07 | 41 |
primary circulatory organ | 8.08e-07 | 27 |