FFCP PHASE1:Mm9::chr8:39724577..39724599,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=244431 | |EntrezGene=244431 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q8BX51,D6RFA5 | |UniProt=Q8BX51,D6RFA5 | ||
|association_with_transcript=-15bp_to_ENSMUST00000118896,ENSMUST00000135764,NM_145841,uc009lme.2_5end | |association_with_transcript=-15bp_to_ENSMUST00000118896,ENSMUST00000135764,NM_145841,uc009lme.2_5end | ||
|cluster_id=chr8:39724577..39724599,- | |||
|description=CAGE_peak_2_at_Sgcz_5end | |description=CAGE_peak_2_at_Sgcz_5end | ||
|id=chr8:39724577..39724599,- | |id=chr8:39724577..39724599,- | ||
|ontology_enrichment_celltype=CL:0000117!4.28e-10!23;CL:0000337!4.28e-10!23 | |ontology_enrichment_celltype=CL:0000117!4.28e-10!23;CL:0000337!4.28e-10!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.18e-18,23;CL:0000337,3.18e-18,23;CL:0000540,1.68e-11,33;CL:0000047,1.68e-11,33;CL:0000031,1.68e-11,33;CL:0000404,1.68e-11,33;CL:0000393,3.81e-09,39;CL:0000211,3.81e-09,39;CL:0002319,5.97e-08,43;CL:0000221,1.10e-07,44;CL:0000133,1.10e-07,44;CL:0002612,4.70e-07,3;CL:0002610,5.93e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.37e-19!52;UBERON:0005068!1.37e-19!52;UBERON:0006241!1.37e-19!52;UBERON:0007135!1.37e-19!52;UBERON:0000033!9.80e-19!63;UBERON:0000955!5.99e-18!50;UBERON:0006238!5.99e-18!50;UBERON:0002616!2.90e-17!49;UBERON:0001017!3.21e-17!73;UBERON:0005743!3.21e-17!73;UBERON:0002346!1.78e-16!71;UBERON:0003075!1.78e-16!71;UBERON:0007284!1.78e-16!71;UBERON:0000073!3.41e-16!75;UBERON:0001016!3.41e-16!75;UBERON:0003056!8.09e-16!49;UBERON:0003080!3.70e-14!40;UBERON:0002020!7.56e-14!34;UBERON:0002780!2.35e-13!39;UBERON:0001890!2.35e-13!39;UBERON:0006240!2.35e-13!39;UBERON:0004121!2.07e-12!102;UBERON:0000924!2.07e-12!102;UBERON:0006601!2.07e-12!102;UBERON:0002791!2.54e-10!29;UBERON:0003528!2.54e-10!29;UBERON:0001893!2.54e-10!29;UBERON:0007811!1.33e-09!86;UBERON:0000153!2.60e-09!94;UBERON:0002021!5.38e-09!10;UBERON:0000411!5.38e-09!10;UBERON:0001950!5.38e-09!10 | |ontology_enrichment_uberon=UBERON:0001049!1.37e-19!52;UBERON:0005068!1.37e-19!52;UBERON:0006241!1.37e-19!52;UBERON:0007135!1.37e-19!52;UBERON:0000033!9.80e-19!63;UBERON:0000955!5.99e-18!50;UBERON:0006238!5.99e-18!50;UBERON:0002616!2.90e-17!49;UBERON:0001017!3.21e-17!73;UBERON:0005743!3.21e-17!73;UBERON:0002346!1.78e-16!71;UBERON:0003075!1.78e-16!71;UBERON:0007284!1.78e-16!71;UBERON:0000073!3.41e-16!75;UBERON:0001016!3.41e-16!75;UBERON:0003056!8.09e-16!49;UBERON:0003080!3.70e-14!40;UBERON:0002020!7.56e-14!34;UBERON:0002780!2.35e-13!39;UBERON:0001890!2.35e-13!39;UBERON:0006240!2.35e-13!39;UBERON:0004121!2.07e-12!102;UBERON:0000924!2.07e-12!102;UBERON:0006601!2.07e-12!102;UBERON:0002791!2.54e-10!29;UBERON:0003528!2.54e-10!29;UBERON:0001893!2.54e-10!29;UBERON:0007811!1.33e-09!86;UBERON:0000153!2.60e-09!94;UBERON:0002021!5.38e-09!10;UBERON:0000411!5.38e-09!10;UBERON:0001950!5.38e-09!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.71e-34,54;UBERON:0001017,1.31e-32,73;UBERON:0001016,1.69e-31,75;UBERON:0001049,2.33e-31,52;UBERON:0005068,2.33e-31,52;UBERON:0006241,2.33e-31,52;UBERON:0007135,2.33e-31,52;UBERON:0002346,1.18e-25,64;UBERON:0003075,1.18e-25,64;UBERON:0007284,1.18e-25,64;UBERON:0004121,2.32e-24,95;UBERON:0000924,2.32e-24,95;UBERON:0006601,2.32e-24,95;UBERON:0002020,7.60e-24,34;UBERON:0000955,2.63e-23,47;UBERON:0006238,2.63e-23,47;UBERON:0002616,6.06e-22,46;UBERON:0010371,1.72e-21,73;UBERON:0003080,2.36e-21,40;UBERON:0002780,1.06e-19,39;UBERON:0001890,1.06e-19,39;UBERON:0006240,1.06e-19,39;UBERON:0002021,3.15e-19,10;UBERON:0000411,3.15e-19,10;UBERON:0001950,3.15e-19,10;UBERON:0003056,7.48e-18,49;UBERON:0003528,3.47e-16,29;UBERON:0002791,3.47e-16,29;UBERON:0001893,3.47e-16,29;UBERON:0010314,2.18e-15,92;UBERON:0002240,1.72e-12,6;UBERON:0005174,1.72e-12,6;UBERON:0001137,1.72e-12,6;UBERON:0003076,1.83e-10,12;UBERON:0003057,1.83e-10,12;UBERON:0001948,2.08e-10,5;UBERON:0002315,2.08e-10,5;UBERON:0002619,2.21e-10,17;UBERON:0000025,4.83e-10,114;UBERON:0000956,8.23e-10,21;UBERON:0001869,8.23e-10,21;UBERON:0000203,8.23e-10,21;UBERON:0004111,6.89e-09,122;UBERON:0002950,2.27e-08,4;UBERON:0001891,2.27e-08,4;UBERON:0009616,2.27e-08,4;UBERON:0010286,2.27e-08,4;UBERON:0002420,4.78e-08,8;UBERON:0007245,4.78e-08,8;UBERON:0010009,4.78e-08,8;UBERON:0010011,4.78e-08,8;UBERON:0000454,4.78e-08,8;UBERON:0002257,4.70e-07,3;UBERON:0004684,5.93e-07,3;UBERON:0002275,5.93e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,0,0.135005938331691,0,2.28520787523043,2.87129103237098,0.61245399607477,0.0958454710182364,0,3.30347642998166,3.31987079021488,2.4577045320999,1.84640802822271,1.64677758484337,0.52091337055676,1.11673199600552,2.8138130501584,2.44477196442896,2.65165726926301,4.6982654663704,2.98239113320481,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.890652834388949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,8.23848516726525,2.74500361691176,0.879580464790051,3.30266208365325,5.11430914660661,2.70124457927428,3.89379031362618,0.203678727700633,0,0,0,0.390361328888111,0.689706313300419,0.540186389416048,0.452114453507145,0.0680364991513279,0.512454881139399,0.0937017245597288,1.03481348295606,0,0,0.527853372491847,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0.456994050438915,0,0,0.581857461502877,0,0.252946148497029,0.295220295959204,0.31399745568275,0,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0.624075346229121,0.757736633841335,0.538192240565737,0,0,0.568474235311454,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,3.69266356971921,5.39173758324135,0,0,0,0,0,0,0,0,0,0.292255857911312,0,2.24924921495265,0,0.35613120733451,0.651547837414304,0,1.32745138339963,0,0.604647113929502,0,0,0.922305443831782,0.258428293168221,0,0,0,0,0,0.680879211507576,0,0,0.428674070063185,1.77340233642274,2.31879462882692,1.48094118541909,0.608929898229199,0,0,0,0,0,0,0,0,0,5.93360966433631,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.216010681643603,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0.448549638131936,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.12950368523413,2.76195141904306,1.71868654031819,1.89038500578056,3.42541259885321,4.5323633843382,3.37511250115903,4.95353323546643,3.17199686288943,3.62432218226274,0,0.399024873401031,0.512200817262403,0.972426868273176,0.628839487883947,0.367687016900028,0.666740183404846,0.618105171716683,1.28367683836726,1.01078884705519,0.50695859978048,0.377252682772152,0.749132059759059,0.448176066834085,0.631790158511746,0.476293691283074,0.811190281613988,0.192909220463705,0.412085900803307,1.03039244094078,1.37147700954166,0.354951612318675,0.715308569841963,0.436039249896986,0.846984423737976,0.761531471025089,0.914639864363863,1.05227884575137,0.950628796921032,1.12228454331548,0.355905054372522,0.394017929502254,0.409231043169689,0.77468420592983,0.192906610981141,0.749431733813838,0.935726433781634,0.214871054048298,0.382576664137687,0,0.695603506861264 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,0,0.135005938331691,0,2.28520787523043,2.87129103237098,0.61245399607477,0.0958454710182364,0,3.30347642998166,3.31987079021488,2.4577045320999,1.84640802822271,1.64677758484337,0.52091337055676,1.11673199600552,2.8138130501584,2.44477196442896,2.65165726926301,4.6982654663704,2.98239113320481,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.890652834388949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,8.23848516726525,2.74500361691176,0.879580464790051,3.30266208365325,5.11430914660661,2.70124457927428,3.89379031362618,0.203678727700633,0,0,0,0.390361328888111,0.689706313300419,0.540186389416048,0.452114453507145,0.0680364991513279,0.512454881139399,0.0937017245597288,1.03481348295606,0,0,0.527853372491847,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0.456994050438915,0,0,0.581857461502877,0,0.252946148497029,0.295220295959204,0.31399745568275,0,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0.624075346229121,0.757736633841335,0.538192240565737,0,0,0.568474235311454,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,3.69266356971921,5.39173758324135,0,0,0,0,0,0,0,0,0,0.292255857911312,0,2.24924921495265,0,0.35613120733451,0.651547837414304,0,1.32745138339963,0,0.604647113929502,0,0,0.922305443831782,0.258428293168221,0,0,0,0,0,0.680879211507576,0,0,0.428674070063185,1.77340233642274,2.31879462882692,1.48094118541909,0.608929898229199,0,0,0,0,0,0,0,0,0,5.93360966433631,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.216010681643603,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0.448549638131936,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.12950368523413,2.76195141904306,1.71868654031819,1.89038500578056,3.42541259885321,4.5323633843382,3.37511250115903,4.95353323546643,3.17199686288943,3.62432218226274,0,0.399024873401031,0.512200817262403,0.972426868273176,0.628839487883947,0.367687016900028,0.666740183404846,0.618105171716683,1.28367683836726,1.01078884705519,0.50695859978048,0.377252682772152,0.749132059759059,0.448176066834085,0.631790158511746,0.476293691283074,0.811190281613988,0.192909220463705,0.412085900803307,1.03039244094078,1.37147700954166,0.354951612318675,0.715308569841963,0.436039249896986,0.846984423737976,0.761531471025089,0.914639864363863,1.05227884575137,0.950628796921032,1.12228454331548,0.355905054372522,0.394017929502254,0.409231043169689,0.77468420592983,0.192906610981141,0.749431733813838,0.935726433781634,0.214871054048298,0.382576664137687,0,0.695603506861264 | ||
|short_description=p2@Sgcz | |short_description=p2@Sgcz | ||
}} | }} |
Latest revision as of 23:24, 1 October 2015
Short description: | p2@Sgcz |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sgcz_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -15bp_to_ENSMUST00000118896, ENSMUST00000135764, NM_145841, uc009lme.2_5end |
EntrezGene: | Sgcz |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.18e-18 | 23 |
neuroblast (sensu Vertebrata) | 3.18e-18 | 23 |
neuron | 1.68e-11 | 33 |
neuronal stem cell | 1.68e-11 | 33 |
neuroblast | 1.68e-11 | 33 |
electrically signaling cell | 1.68e-11 | 33 |
electrically responsive cell | 3.81e-09 | 39 |
electrically active cell | 3.81e-09 | 39 |
neural cell | 5.97e-08 | 43 |
ectodermal cell | 1.10e-07 | 44 |
neurectodermal cell | 1.10e-07 | 44 |
neuron of the ventral spinal cord | 4.70e-07 | 3 |
raphe nuclei neuron | 5.93e-07 | 3 |