Personal tools

FFCP PHASE1:Mm9::chr4:124559029..124559080,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=230735
|EntrezGene=230735
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8BYG9
|UniProt=Q8BYG9
|association_with_transcript=0bp_to_NM_177671,uc008urh.2_5end
|association_with_transcript=0bp_to_NM_177671,uc008urh.2_5end
|cluster_id=chr4:124559029..124559080,+
|description=CAGE_peak_1_at_Epha10_5end
|description=CAGE_peak_1_at_Epha10_5end
|id=chr4:124559029..124559080,+
|id=chr4:124559029..124559080,+
|ontology_enrichment_celltype=CL:0000540!1.79e-11!33;CL:0000047!1.79e-11!33;CL:0000031!1.79e-11!33;CL:0000404!1.79e-11!33;CL:0000117!2.73e-11!23;CL:0000337!2.73e-11!23;CL:0000393!3.76e-08!39;CL:0000211!3.76e-08!39;CL:0000221!9.23e-08!44;CL:0000133!9.23e-08!44;CL:0002319!2.05e-07!43
|ontology_enrichment_celltype=CL:0000540!1.79e-11!33;CL:0000047!1.79e-11!33;CL:0000031!1.79e-11!33;CL:0000404!1.79e-11!33;CL:0000117!2.73e-11!23;CL:0000337!2.73e-11!23;CL:0000393!3.76e-08!39;CL:0000211!3.76e-08!39;CL:0000221!9.23e-08!44;CL:0000133!9.23e-08!44;CL:0002319!2.05e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,9.65e-13,23;CL:0000337,9.65e-13,23;CL:0000540,3.68e-08,33;CL:0000047,3.68e-08,33;CL:0000031,3.68e-08,33;CL:0000404,3.68e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.65e-26!102;UBERON:0000924!1.65e-26!102;UBERON:0006601!1.65e-26!102;UBERON:0002346!4.03e-26!71;UBERON:0003075!4.03e-26!71;UBERON:0007284!4.03e-26!71;UBERON:0000033!1.17e-22!63;UBERON:0000073!2.28e-22!75;UBERON:0001016!2.28e-22!75;UBERON:0001017!2.92e-22!73;UBERON:0005743!2.92e-22!73;UBERON:0001049!5.93e-19!52;UBERON:0005068!5.93e-19!52;UBERON:0006241!5.93e-19!52;UBERON:0007135!5.93e-19!52;UBERON:0003056!7.06e-18!49;UBERON:0000955!1.55e-17!50;UBERON:0006238!1.55e-17!50;UBERON:0002616!8.61e-17!49;UBERON:0002020!7.76e-16!34;UBERON:0003080!2.45e-13!40;UBERON:0002780!1.48e-12!39;UBERON:0001890!1.48e-12!39;UBERON:0006240!1.48e-12!39;UBERON:0002791!2.92e-12!29;UBERON:0003528!2.92e-12!29;UBERON:0001893!2.92e-12!29;UBERON:0007811!3.21e-12!86;UBERON:0000153!5.12e-10!94;UBERON:0002021!3.63e-09!10;UBERON:0000411!3.63e-09!10;UBERON:0001950!3.63e-09!10;UBERON:0002619!5.73e-08!17;UBERON:0000956!2.80e-07!21;UBERON:0001869!2.80e-07!21;UBERON:0000203!2.80e-07!21;UBERON:0002420!9.25e-07!8;UBERON:0007245!9.25e-07!8;UBERON:0010009!9.25e-07!8;UBERON:0010011!9.25e-07!8;UBERON:0000454!9.25e-07!8
|ontology_enrichment_uberon=UBERON:0004121!1.65e-26!102;UBERON:0000924!1.65e-26!102;UBERON:0006601!1.65e-26!102;UBERON:0002346!4.03e-26!71;UBERON:0003075!4.03e-26!71;UBERON:0007284!4.03e-26!71;UBERON:0000033!1.17e-22!63;UBERON:0000073!2.28e-22!75;UBERON:0001016!2.28e-22!75;UBERON:0001017!2.92e-22!73;UBERON:0005743!2.92e-22!73;UBERON:0001049!5.93e-19!52;UBERON:0005068!5.93e-19!52;UBERON:0006241!5.93e-19!52;UBERON:0007135!5.93e-19!52;UBERON:0003056!7.06e-18!49;UBERON:0000955!1.55e-17!50;UBERON:0006238!1.55e-17!50;UBERON:0002616!8.61e-17!49;UBERON:0002020!7.76e-16!34;UBERON:0003080!2.45e-13!40;UBERON:0002780!1.48e-12!39;UBERON:0001890!1.48e-12!39;UBERON:0006240!1.48e-12!39;UBERON:0002791!2.92e-12!29;UBERON:0003528!2.92e-12!29;UBERON:0001893!2.92e-12!29;UBERON:0007811!3.21e-12!86;UBERON:0000153!5.12e-10!94;UBERON:0002021!3.63e-09!10;UBERON:0000411!3.63e-09!10;UBERON:0001950!3.63e-09!10;UBERON:0002619!5.73e-08!17;UBERON:0000956!2.80e-07!21;UBERON:0001869!2.80e-07!21;UBERON:0000203!2.80e-07!21;UBERON:0002420!9.25e-07!8;UBERON:0007245!9.25e-07!8;UBERON:0010009!9.25e-07!8;UBERON:0010011!9.25e-07!8;UBERON:0000454!9.25e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.94e-23,64;UBERON:0003075,3.94e-23,64;UBERON:0007284,3.94e-23,64;UBERON:0000073,2.40e-22,54;UBERON:0004121,9.73e-21,95;UBERON:0000924,9.73e-21,95;UBERON:0006601,9.73e-21,95;UBERON:0010371,1.02e-20,73;UBERON:0001017,1.18e-20,73;UBERON:0001049,2.41e-20,52;UBERON:0005068,2.41e-20,52;UBERON:0006241,2.41e-20,52;UBERON:0007135,2.41e-20,52;UBERON:0001016,9.60e-20,75;UBERON:0002020,5.56e-19,34;UBERON:0010314,2.06e-18,92;UBERON:0003056,2.15e-16,49;UBERON:0000955,1.58e-15,47;UBERON:0006238,1.58e-15,47;UBERON:0002616,1.36e-14,46;UBERON:0003528,5.90e-14,29;UBERON:0002791,5.90e-14,29;UBERON:0001893,5.90e-14,29;UBERON:0002021,7.07e-13,10;UBERON:0000411,7.07e-13,10;UBERON:0001950,7.07e-13,10;UBERON:0003080,2.78e-12,40;UBERON:0002780,2.62e-11,39;UBERON:0001890,2.62e-11,39;UBERON:0006240,2.62e-11,39;UBERON:0003076,1.44e-09,12;UBERON:0003057,1.44e-09,12;UBERON:0002420,2.62e-09,8;UBERON:0007245,2.62e-09,8;UBERON:0010009,2.62e-09,8;UBERON:0010011,2.62e-09,8;UBERON:0000454,2.62e-09,8;UBERON:0002240,3.93e-08,6;UBERON:0005174,3.93e-08,6;UBERON:0001137,3.93e-08,6;UBERON:0002619,6.50e-08,17;UBERON:0000956,3.63e-07,21;UBERON:0001869,3.63e-07,21;UBERON:0000203,3.63e-07,21;UBERON:0001948,7.19e-07,5;UBERON:0002315,7.19e-07,5
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0.342401459862411,0,0,0,0,0,0,0,2.97651515528744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.68802551266472,5.81890077199236,7.60597684207415,0,0,0,0,0,0,0,0,0.135005938331691,0,19.9955689082663,14.5773237028065,0.122490799214954,0.191690942036473,0.919218786610021,15.4162233399144,14.939418555967,16.4358990584181,4.48413378282659,4.39140689291566,3.64639359389732,17.3093459380856,11.8180148106653,16.6550090076723,13.8475435172624,14.2371680799103,6.15118171223492,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,1.40843419776681,0,0,0,0,0,0,0,0,0.890652834388949,1.04091196059682,2.74018930480927,1.61430848079241,2.11011696773672,4.70354828542819,0.502666365318702,0,0,0,0,0,0,0,2.63502717310392,3.56059401582874,0,0,0,0,23.2175491077475,8.6925114535539,3.5183218591602,18.251553620189,24.2929684463814,16.4152555202052,16.5486088329113,0,0,0,0.631325567659422,0.650602214813519,1.37941262660084,1.98068342785884,3.61691562805716,7.00775941258677,3.71529788826064,3.93547243150861,6.20888089773638,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4026159880019,0.308713837137853,0,0,0.213288250535234,0.232236671860439,0.902072229254653,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0.898819408654221,0,0,0.189667900953082,0.342745537829186,1.1270773567308,0.407302655690628,0,0.280543279561274,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,14.9312048688647,20.74646852682,0,0,0,0.390438744296638,0,0.477937595905104,0.222798674082394,0.566153061577665,0.404810701674894,0.876767573733936,0.395287777946524,15.4234231882467,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.428674070063185,0,0.713475270408282,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,18.542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.216010681643603,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0.330916980914195,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,9.60078132449013,15.1907328047368,14.3223878359849,12.8889886757766,15.7568979547248,12.8416962556249,20.2506750069542,18.0128481289688,15.8599843144472,25.3702552758392,0.518936737920883,2.39414924040619,2.04880326904961,0.972426868273176,0.209613162627982,1.47074806760011,1.77797382241292,0.824140228955577,1.28367683836726,2.52697211763797,2.02783439912192,0.943131706930381,1.68554713445788,1.02440243847791,1.7230640686684,0,1.50649623728312,1.92909220463705,1.23625770240992,1.76638704161277,2.05721551431249,1.24233064311536,1.43061713968393,0.872078499793971,0.470546902076653,1.77690676572521,0.548783918618318,0.789209134313529,2.17286582153379,0,1.77952527186261,1.47756723563345,0.818462086339379,1.23949472948773,1.73615949883027,3.49734809113124,1.16965804222704,0.644613162144895,0.382576664137687,0.882365676478062,0.927471342481686
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0.342401459862411,0,0,0,0,0,0,0,2.97651515528744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.68802551266472,5.81890077199236,7.60597684207415,0,0,0,0,0,0,0,0,0.135005938331691,0,19.9955689082663,14.5773237028065,0.122490799214954,0.191690942036473,0.919218786610021,15.4162233399144,14.939418555967,16.4358990584181,4.48413378282659,4.39140689291566,3.64639359389732,17.3093459380856,11.8180148106653,16.6550090076723,13.8475435172624,14.2371680799103,6.15118171223492,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,1.40843419776681,0,0,0,0,0,0,0,0,0.890652834388949,1.04091196059682,2.74018930480927,1.61430848079241,2.11011696773672,4.70354828542819,0.502666365318702,0,0,0,0,0,0,0,2.63502717310392,3.56059401582874,0,0,0,0,23.2175491077475,8.6925114535539,3.5183218591602,18.251553620189,24.2929684463814,16.4152555202052,16.5486088329113,0,0,0,0.631325567659422,0.650602214813519,1.37941262660084,1.98068342785884,3.61691562805716,7.00775941258677,3.71529788826064,3.93547243150861,6.20888089773638,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4026159880019,0.308713837137853,0,0,0.213288250535234,0.232236671860439,0.902072229254653,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0.898819408654221,0,0,0.189667900953082,0.342745537829186,1.1270773567308,0.407302655690628,0,0.280543279561274,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,14.9312048688647,20.74646852682,0,0,0,0.390438744296638,0,0.477937595905104,0.222798674082394,0.566153061577665,0.404810701674894,0.876767573733936,0.395287777946524,15.4234231882467,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.428674070063185,0,0.713475270408282,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,18.542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.216010681643603,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0.330916980914195,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,9.60078132449013,15.1907328047368,14.3223878359849,12.8889886757766,15.7568979547248,12.8416962556249,20.2506750069542,18.0128481289688,15.8599843144472,25.3702552758392,0.518936737920883,2.39414924040619,2.04880326904961,0.972426868273176,0.209613162627982,1.47074806760011,1.77797382241292,0.824140228955577,1.28367683836726,2.52697211763797,2.02783439912192,0.943131706930381,1.68554713445788,1.02440243847791,1.7230640686684,0,1.50649623728312,1.92909220463705,1.23625770240992,1.76638704161277,2.05721551431249,1.24233064311536,1.43061713968393,0.872078499793971,0.470546902076653,1.77690676572521,0.548783918618318,0.789209134313529,2.17286582153379,0,1.77952527186261,1.47756723563345,0.818462086339379,1.23949472948773,1.73615949883027,3.49734809113124,1.16965804222704,0.644613162144895,0.382576664137687,0.882365676478062,0.927471342481686
|short_description=p1@Epha10
|short_description=p1@Epha10
}}
}}

Latest revision as of 07:59, 26 September 2015

Short description:p1@Epha10
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Epha10_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_NM_177671, uc008urh.2_5end
EntrezGene:Epha10
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Epha10

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.69
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F120.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.58
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.48
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E417.31
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.66
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.85
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.24
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.15
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C14.70
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A423.22
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F13.52
cortex, adult.CNhs10473.12-14D518.25
cortex, neonate N30.CNhs11107.1392-42F224.29
diencephalon, adult.CNhs10482.20-12F216.42
diencephalon, neonate N30.CNhs11201.1388-42B216.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C67.01
eyeball, neonate N01.CNhs11140.1532-43E73.72
eyeball, neonate N02.CNhs11205.1551-44G83.94
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E816.40
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C214.93
medulla oblongata, neonate N30.CNhs11200.1396-42A320.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I915.42
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C918.54
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A215.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.25
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.86
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A925.37
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.65e-1323
neuroblast (sensu Vertebrata)9.65e-1323
neuron3.68e-0833
neuronal stem cell3.68e-0833
neuroblast3.68e-0833
electrically signaling cell3.68e-0833

Uber anatomy
Ontology termp-valuen
neurectoderm3.94e-2364
neural plate3.94e-2364
presumptive neural plate3.94e-2364
regional part of nervous system2.40e-2254
ectoderm-derived structure9.73e-2195
ectoderm9.73e-2195
presumptive ectoderm9.73e-2195
ecto-epithelium1.02e-2073
central nervous system1.18e-2073
neural tube2.41e-2052
neural rod2.41e-2052
future spinal cord2.41e-2052
neural keel2.41e-2052
nervous system9.60e-2075
gray matter5.56e-1934
structure with developmental contribution from neural crest2.06e-1892
pre-chordal neural plate2.15e-1649
brain1.58e-1547
future brain1.58e-1547
regional part of brain1.36e-1446
brain grey matter5.90e-1429
regional part of telencephalon5.90e-1429
telencephalon5.90e-1429
occipital lobe7.07e-1310
visual cortex7.07e-1310
neocortex7.07e-1310
anterior neural tube2.78e-1240
regional part of forebrain2.62e-1139
forebrain2.62e-1139
future forebrain2.62e-1139
posterior neural tube1.44e-0912
chordal neural plate1.44e-0912
basal ganglion2.62e-098
nuclear complex of neuraxis2.62e-098
aggregate regional part of brain2.62e-098
collection of basal ganglia2.62e-098
cerebral subcortex2.62e-098
spinal cord3.93e-086
dorsal region element3.93e-086
dorsum3.93e-086
regional part of cerebral cortex6.50e-0817
cerebral cortex3.63e-0721
cerebral hemisphere3.63e-0721
pallium3.63e-0721
regional part of spinal cord7.19e-075
gray matter of spinal cord7.19e-075
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:124559029..124559080,%2B&oldid=4242086"