Personal tools

FFCP PHASE1:Mm9::chr12:85379338..85379385,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=171282
|EntrezGene=171282
|HGNC=
|HGNC=
|MCL_coexpression_id=810
|MCL_coexpression_id=810
|TSSclassifier=NA
|UniProt=Q8BWN8,Q14DI6
|UniProt=Q8BWN8,Q14DI6
|association_with_transcript=9bp_to_ENSMUST00000021652,NM_134247,uc007oed.1_5end
|association_with_transcript=9bp_to_ENSMUST00000021652,NM_134247,uc007oed.1_5end
|cluster_id=chr12:85379338..85379385,+
|description=CAGE_peak_1_at_Acot4_5end
|description=CAGE_peak_1_at_Acot4_5end
|id=chr12:85379338..85379385,+
|id=chr12:85379338..85379385,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000239,7.28e-07,6;CL:0000677,7.28e-07,6;CL:0000584,7.28e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009854!2.43e-12!23;UBERON:0009856!2.43e-12!23;UBERON:0002365!4.54e-12!25;UBERON:0002330!4.54e-12!25;UBERON:0002107!7.10e-12!22;UBERON:0007499!7.10e-12!22;UBERON:0006925!7.10e-12!22;UBERON:0009497!7.10e-12!22;UBERON:0000015!7.10e-12!22;UBERON:0002423!7.10e-12!22;UBERON:0006235!7.10e-12!22;UBERON:0008835!7.10e-12!22;UBERON:0003894!7.10e-12!22;UBERON:0004161!7.10e-12!22;UBERON:0008836!7.10e-12!22;UBERON:0005172!2.41e-11!49;UBERON:0005173!2.41e-11!49;UBERON:0002417!2.41e-11!49;UBERON:0000916!2.41e-11!49;UBERON:0000160!1.74e-10!43;UBERON:0005409!2.15e-10!59;UBERON:0004119!4.61e-10!130;UBERON:0000925!4.61e-10!130;UBERON:0006595!4.61e-10!130;UBERON:0001007!8.38e-10!128;UBERON:0001555!8.38e-10!128;UBERON:0007026!8.38e-10!128;UBERON:0004921!5.01e-09!126;UBERON:0004185!5.01e-09!126;UBERON:0000344!5.05e-09!15;UBERON:0001242!5.69e-08!13;UBERON:0000060!5.69e-08!13;UBERON:0001262!5.69e-08!13;UBERON:0004786!5.69e-08!13;UBERON:0004923!6.84e-07!24
|ontology_enrichment_uberon=UBERON:0009854!2.43e-12!23;UBERON:0009856!2.43e-12!23;UBERON:0002365!4.54e-12!25;UBERON:0002330!4.54e-12!25;UBERON:0002107!7.10e-12!22;UBERON:0007499!7.10e-12!22;UBERON:0006925!7.10e-12!22;UBERON:0009497!7.10e-12!22;UBERON:0000015!7.10e-12!22;UBERON:0002423!7.10e-12!22;UBERON:0006235!7.10e-12!22;UBERON:0008835!7.10e-12!22;UBERON:0003894!7.10e-12!22;UBERON:0004161!7.10e-12!22;UBERON:0008836!7.10e-12!22;UBERON:0005172!2.41e-11!49;UBERON:0005173!2.41e-11!49;UBERON:0002417!2.41e-11!49;UBERON:0000916!2.41e-11!49;UBERON:0000160!1.74e-10!43;UBERON:0005409!2.15e-10!59;UBERON:0004119!4.61e-10!130;UBERON:0000925!4.61e-10!130;UBERON:0006595!4.61e-10!130;UBERON:0001007!8.38e-10!128;UBERON:0001555!8.38e-10!128;UBERON:0007026!8.38e-10!128;UBERON:0004921!5.01e-09!126;UBERON:0004185!5.01e-09!126;UBERON:0000344!5.05e-09!15;UBERON:0001242!5.69e-08!13;UBERON:0000060!5.69e-08!13;UBERON:0001262!5.69e-08!13;UBERON:0004786!5.69e-08!13;UBERON:0004923!6.84e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.59e-20,31;UBERON:0009854,1.38e-16,23;UBERON:0009856,1.38e-16,23;UBERON:0002107,5.94e-16,22;UBERON:0007499,5.94e-16,22;UBERON:0006925,5.94e-16,22;UBERON:0009497,5.94e-16,22;UBERON:0000015,5.94e-16,22;UBERON:0002423,5.94e-16,22;UBERON:0006235,5.94e-16,22;UBERON:0008835,5.94e-16,22;UBERON:0003894,5.94e-16,22;UBERON:0004161,5.94e-16,22;UBERON:0008836,5.94e-16,22;UBERON:0002365,3.55e-14,25;UBERON:0002330,3.55e-14,25;UBERON:0005409,5.30e-14,47;UBERON:0001007,6.48e-12,116;UBERON:0001555,6.48e-12,116;UBERON:0007026,6.48e-12,116;UBERON:0004119,2.08e-11,118;UBERON:0000925,2.08e-11,118;UBERON:0006595,2.08e-11,118;UBERON:0004921,6.91e-11,114;UBERON:0000344,1.27e-10,15;UBERON:0005172,7.90e-10,49;UBERON:0005173,7.90e-10,49;UBERON:0002417,7.90e-10,49;UBERON:0000916,7.90e-10,49;UBERON:0001242,3.34e-09,13;UBERON:0001262,3.34e-09,13;UBERON:0004786,3.34e-09,13;UBERON:0003929,2.32e-07,55;UBERON:0003104,4.98e-07,61;UBERON:0009142,4.98e-07,61
|phase1_expression=0,50.9504095153467,61.4248973175874,40.8326685264221,51.5922601844738,11.7515490338323,8.41005506143892,0,0,0.234064526321993,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,4.67738095830884,0,0,16.3192271249275,15.5998311125676,48.2354849856617,35.3224836850441,23.4863643627619,29.2636065962816,19.6583501212746,15.5211357458713,0,0,0,2.02196133825892,0.831173226792462,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0,0.0755715601067855,0,17.2084775396277,10.1995700056163,10.2543606411185,20.7928453583254,43.0105811613442,11.0951091904084,0,0,0,0,0,0,0,0,0,0,32.8849573590893,0,0.29688427812965,0.346970653532272,0,0.922461989024234,0.150722640552623,1.41106448562846,0.251333182659351,6.67426412882809,4.48258006451726,0,0.161766849947409,0,0.484875253135222,9.31958806090611,0,0,8.17462576667492,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0.101839363850316,0.746441823660558,0,4.41927897361595,0,0.229902104433473,0,0.30140963567143,0,0.12811372028485,0,0.776110112217047,0,0,0,0,0,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0.16455984991348,0.32833492815819,0.162137619091711,0,0.219550115291051,0.402619256281115,0,0.102904612379284,21.8076396769307,28.5606611996628,0,0,2.70621668776396,11.6976444281539,17.5678654637448,25.4902338990829,23.7264530772256,37.7160606317985,34.9355940232375,32.0319919986253,37.8230329011093,17.0775687644302,16.6426298403515,18.1218558661474,0.569003702859245,0.913988100877831,4.50830942692322,3.25842124552503,4.84881217919064,8.76697748628982,14.0385112415851,19.4845395333075,25.2767951824613,27.7643618824051,74.7060620259615,3.67059232575407,4.32429789249047,4.27238013531222,4.86864291332407,6.51178331331525,8.65727896056827,9.49397253587675,27.0765828714309,15.6500005517206,31.629005436018,42.4240680342094,35.8843324081745,26.7733610623938,26.550817201243,20.7450714186248,0.184753190166605,0,0.162964976442026,0,0,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0.983528546038072,1.37968373152366,0,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0,1.32745138339963,0.485561272309963,0,0.188605079755898,0,0,10.0787034335606,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.42366414172764,0,0,0.807322133479528,1.68876189798836,1.19372344003136,0.984845398470368,28.8566028263552,0.18542530201051,0.683483523191411,0,0,0.376736914009382,0.27338845544205,0,0,0,0.138199973804424,0.954670618015114,0,0.406638934253697,1.29606408986162,0.209088296014469,2.40198820120795,1.48350781023303,2.97552440611209,0.523511883968059,9.98035294346805,0.621339313086926,0,0,0,0,0,0.168956125490778,0.234714477291508,0.13020438484395,0,0,0.288030006257865,0.316011120628178,0,0,0,0.179026695667481,0,0.240390899039938,0,0.100966449948148,0.15241361331,0,0,0,0,0.680191150845634,0,0.0897138566094757,0,0,0.375364950902364,0.183151624267265,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.853668028770671,1.70174701947806,2.72497111416377,1.65459157605013,2.44471400581777,2.47242068686673,1.60459604795908,1.76888048234658,2.02783439912192,0.943131706930381,2.1537546718073,1.85672941974121,1.7230640686684,1.90517476513229,1.39061191133827,1.92909220463705,2.88460130562315,2.50238164228475,2.05721551431249,2.30718548007139,0.953744759789284,2.76158191601424,2.07040636913727,1.69229215783353,2.37806364734604,1.31534855718921,1.62964936615034,1.68342681497322,2.25406534435931,1.87158516513571,1.63692417267876,2.94379998253335,1.54325288784913,0,1.87145286756327,5.80151845930405,0.382576664137687,0.661774257358546,0.695603506861264
|phase1_expression=0,50.9504095153467,61.4248973175874,40.8326685264221,51.5922601844738,11.7515490338323,8.41005506143892,0,0,0.234064526321993,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,4.67738095830884,0,0,16.3192271249275,15.5998311125676,48.2354849856617,35.3224836850441,23.4863643627619,29.2636065962816,19.6583501212746,15.5211357458713,0,0,0,2.02196133825892,0.831173226792462,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0,0.0755715601067855,0,17.2084775396277,10.1995700056163,10.2543606411185,20.7928453583254,43.0105811613442,11.0951091904084,0,0,0,0,0,0,0,0,0,0,32.8849573590893,0,0.29688427812965,0.346970653532272,0,0.922461989024234,0.150722640552623,1.41106448562846,0.251333182659351,6.67426412882809,4.48258006451726,0,0.161766849947409,0,0.484875253135222,9.31958806090611,0,0,8.17462576667492,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0.101839363850316,0.746441823660558,0,4.41927897361595,0,0.229902104433473,0,0.30140963567143,0,0.12811372028485,0,0.776110112217047,0,0,0,0,0,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0.16455984991348,0.32833492815819,0.162137619091711,0,0.219550115291051,0.402619256281115,0,0.102904612379284,21.8076396769307,28.5606611996628,0,0,2.70621668776396,11.6976444281539,17.5678654637448,25.4902338990829,23.7264530772256,37.7160606317985,34.9355940232375,32.0319919986253,37.8230329011093,17.0775687644302,16.6426298403515,18.1218558661474,0.569003702859245,0.913988100877831,4.50830942692322,3.25842124552503,4.84881217919064,8.76697748628982,14.0385112415851,19.4845395333075,25.2767951824613,27.7643618824051,74.7060620259615,3.67059232575407,4.32429789249047,4.27238013531222,4.86864291332407,6.51178331331525,8.65727896056827,9.49397253587675,27.0765828714309,15.6500005517206,31.629005436018,42.4240680342094,35.8843324081745,26.7733610623938,26.550817201243,20.7450714186248,0.184753190166605,0,0.162964976442026,0,0,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0.983528546038072,1.37968373152366,0,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0,1.32745138339963,0.485561272309963,0,0.188605079755898,0,0,10.0787034335606,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.42366414172764,0,0,0.807322133479528,1.68876189798836,1.19372344003136,0.984845398470368,28.8566028263552,0.18542530201051,0.683483523191411,0,0,0.376736914009382,0.27338845544205,0,0,0,0.138199973804424,0.954670618015114,0,0.406638934253697,1.29606408986162,0.209088296014469,2.40198820120795,1.48350781023303,2.97552440611209,0.523511883968059,9.98035294346805,0.621339313086926,0,0,0,0,0,0.168956125490778,0.234714477291508,0.13020438484395,0,0,0.288030006257865,0.316011120628178,0,0,0,0.179026695667481,0,0.240390899039938,0,0.100966449948148,0.15241361331,0,0,0,0,0.680191150845634,0,0.0897138566094757,0,0,0.375364950902364,0.183151624267265,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.853668028770671,1.70174701947806,2.72497111416377,1.65459157605013,2.44471400581777,2.47242068686673,1.60459604795908,1.76888048234658,2.02783439912192,0.943131706930381,2.1537546718073,1.85672941974121,1.7230640686684,1.90517476513229,1.39061191133827,1.92909220463705,2.88460130562315,2.50238164228475,2.05721551431249,2.30718548007139,0.953744759789284,2.76158191601424,2.07040636913727,1.69229215783353,2.37806364734604,1.31534855718921,1.62964936615034,1.68342681497322,2.25406534435931,1.87158516513571,1.63692417267876,2.94379998253335,1.54325288784913,0,1.87145286756327,5.80151845930405,0.382576664137687,0.661774257358546,0.695603506861264
|short_description=p1@Acot4
|short_description=p1@Acot4
}}
}}

Latest revision as of 22:05, 26 September 2015

Short description:p1@Acot4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Acot4_5end
Coexpression cluster:MCL_coexpression_mm9:810
Association with transcript: 9bp_to_ENSMUST00000021652, NM_134247, uc007oed.1_5end
EntrezGene:Acot4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Acot4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I550.95
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I661.42
CD326+ enterocyte, pool1.CNhs13542.11848-124I340.83
CD326+ enterocyte, pool2.CNhs13197.11849-124I451.59
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.75
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.41
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D116.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D215.60
GP2+ M cell, pool1.CNhs13228.11845-124H948.24
GP2+ M cell, pool2.CNhs13231.11846-124I135.32
GP2+ M cell, pool3.CNhs13240.11847-124I223.49
Ileum epithelium, pool1.CNhs13199.10252-104B929.26
Ileum epithelium, pool2.CNhs13232.10253-104C119.66
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C815.52
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F717.21
Mouse hepatocyte, donor1.CNhs13078.11714-123C410.20
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.25
Mouse hepatocyte, donor6.CNhs13090.11822-124F420.79
Mouse hepatocyte, donor8.CNhs13091.11824-124F643.01
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.10
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B632.88
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A86.67
aorta, adult.CNhs10498.46-23H14.48
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H78.17
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G44.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I321.81
intestine, adult.CNhs10496.178-9A328.56
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H411.70
intestine, embryo E17.CNhs10582.482-18D317.57
intestine, embryo E18.CNhs10526.1289-20F725.49
intestine, neonate N00.CNhs11126.644-26D123.73
intestine, neonate N01.CNhs11192.1322-23E937.72
intestine, neonate N06.CNhs11102.688-20B834.94
intestine, neonate N07.CNhs11095.720-20F232.03
intestine, neonate N10.CNhs11098.755-23A537.82
intestine, neonate N20.CNhs11187.827-18D117.08
intestine, neonate N25.CNhs11121.1352-25E316.64
intestine, neonate N30.CNhs11131.1384-42G118.12
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C74.85
kidney, neonate N00.CNhs11214.646-21G78.77
kidney, neonate N10.CNhs11206.758-6D514.04
kidney, neonate N20.CNhs11113.832-19I119.48
kidney, neonate N25.CNhs11122.1353-25F325.28
kidney, neonate N30.CNhs11203.1385-42H127.76
liver, adult pregnant day01.CNhs10466.508-5B274.71
liver, embryo E12.CNhs10601.355-15F83.67
liver, embryo E13.CNhs10524.378-3H64.32
liver, embryo E14.CNhs10594.409-16E14.27
liver, embryo E15.CNhs10520.433-16D74.87
liver, embryo E16.CNhs10523.462-17F56.51
liver, embryo E17.CNhs10510.481-18A38.66
liver, embryo E18.CNhs10579.499-43G49.49
liver, neonate N00.CNhs11117.641-24F427.08
liver, neonate N03.CNhs11123.1345-25G215.65
liver, neonate N06.CNhs11101.684-20A831.63
liver, neonate N07.CNhs11103.716-20H242.42
liver, neonate N10.CNhs11115.751-24B935.88
liver, neonate N20.CNhs11220.823-25A326.77
liver, neonate N25.CNhs11198.1368-26H126.55
liver, neonate N30.CNhs11106.1382-42D120.75
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G910.08
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H31.69
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I128.86
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A92.98
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I19.98
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C25.80
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
brush border epithelial cell7.28e-076
gut absorptive cell7.28e-076
enterocyte7.28e-076

Uber anatomy
Ontology termp-valuen
intestine6.59e-2031
digestive tract diverticulum1.38e-1623
sac1.38e-1623
liver5.94e-1622
epithelial sac5.94e-1622
digestive gland5.94e-1622
epithelium of foregut-midgut junction5.94e-1622
anatomical boundary5.94e-1622
hepatobiliary system5.94e-1622
foregut-midgut junction5.94e-1622
hepatic diverticulum5.94e-1622
liver primordium5.94e-1622
septum transversum5.94e-1622
liver bud5.94e-1622
exocrine gland3.55e-1425
exocrine system3.55e-1425
gastrointestinal system5.30e-1447
digestive system6.48e-12116
digestive tract6.48e-12116
primitive gut6.48e-12116
endoderm-derived structure2.08e-11118
endoderm2.08e-11118
presumptive endoderm2.08e-11118
subdivision of digestive tract6.91e-11114
mucosa1.27e-1015
abdomen element7.90e-1049
abdominal segment element7.90e-1049
abdominal segment of trunk7.90e-1049
abdomen7.90e-1049
intestinal mucosa3.34e-0913
wall of intestine3.34e-0913
gastrointestinal system mucosa3.34e-0913
gut epithelium2.32e-0755
mesenchyme4.98e-0761
entire embryonic mesenchyme4.98e-0761
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr12:85379338..85379385,%2B&oldid=4276822"