FFCP PHASE1:Hg19::chr2:170664937..170664947,+: Difference between revisions
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|id=chr2:170664937..170664947,+
|short_description=p13@SSB
|description=CAGE_peak_13_at_SSB_5end
|association_with_transcript=-39bp_to_ENST00000470621,ENST000004909...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6741 | |EntrezGene=6741 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11316 | |HGNC=11316 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-39bp_to_ENST00000470621,ENST00000490914_5end | |||
|cluster_id=chr2:170664937..170664947,+ | |||
|coexpression_cluster_id=C161 | |||
|description=CAGE_peak_13_at_SSB_5end | |||
|id=chr2:170664937..170664947,+ | |||
|ontology_enrichment_celltype=CL:0000136!7.12e-12!15;CL:0002617!2.17e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002097;3.11e-21;2!CL:0000174;1.22e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,3.11e-21,2;CL:0000174,1.22e-14,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;2.70e-40;1!DOID:3451;6.30e-21;2!DOID:4159;6.30e-21;2!DOID:0060122;6.30e-21;2!DOID:170;5.54e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.21e-40,1;DOID:3451,5.70e-21,2;DOID:4159,5.70e-21,2;DOID:0060122,5.70e-21,2;DOID:170,5.54e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0003688!2.07e-10!6;UBERON:0002358!2.07e-10!6;UBERON:0003684!2.07e-10!6;UBERON:0001178!2.07e-10!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.21e-40;1!UBERON:0002369;1.22e-14;3!UBERON:0001235;1.22e-14;3!UBERON:0006858;1.22e-14;3!UBERON:0000014;3.60e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,9.91e-41,1;UBERON:0002369,1.22e-14,3;UBERON:0001235,1.22e-14,3;UBERON:0006858,1.22e-14,3;UBERON:0000014,3.42e-11,4 | |||
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|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.589494246078727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,1.0027595760908,0.919036730290385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915360273587694,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,2.00013882331577,0,0,0,0,5.36103978437314,0,0,0,0.244736704506468,0.537266523244462,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p13@SSB | |||
}} | }} |
Latest revision as of 02:44, 18 September 2015
Short description: | p13@SSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SSB_5end |
Coexpression cluster: | C161_mesothelioma_Mesothelial_acute_mesenchymal_extraskeletal_renal_placenta |
Association with transcript: | -39bp_to_ENST00000470621, ENST00000490914_5end |
EntrezGene: | SSB |
HGNC: | 11316 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 3.11e-21 | 2 |
steroid hormone secreting cell | 1.22e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 9.91e-41 | 1 |
adrenal gland | 1.22e-14 | 3 |
adrenal cortex | 1.22e-14 | 3 |
adrenal/interrenal gland | 1.22e-14 | 3 |
zone of skin | 3.42e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.21e-40 | 1 |
skin carcinoma | 5.70e-21 | 2 |
skin cancer | 5.70e-21 | 2 |
integumentary system cancer | 5.70e-21 | 2 |
endocrine gland cancer | 5.54e-08 | 6 |