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FFCP PHASE1:Mm9::chr10:79792706..79792732,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=70335
|EntrezGene=70335
|HGNC=
|HGNC=
|MCL_coexpression_id=0
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=Q9JM62,D3YTR2,D3YTR1
|UniProt=Q9JM62,D3YTR2,D3YTR1
|association_with_transcript=8bp_to_ENSMUST00000105354,ENSMUST00000105355,ENSMUST00000105357,ENSMUST00000105358_5end
|association_with_transcript=8bp_to_ENSMUST00000105354,ENSMUST00000105355,ENSMUST00000105357,ENSMUST00000105358_5end
|cluster_id=chr10:79792706..79792732,+
|description=CAGE_peak_2_at_Reep6_5end
|description=CAGE_peak_2_at_Reep6_5end
|id=chr10:79792706..79792732,+
|id=chr10:79792706..79792732,+
|ontology_enrichment_celltype=CL:0000117!2.93e-11!23;CL:0000337!2.93e-11!23
|ontology_enrichment_celltype=CL:0000117!2.93e-11!23;CL:0000337!2.93e-11!23
|ontology_enrichment_celltype_v019_2=CL:0000117,5.58e-10,23;CL:0000337,5.58e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!9.22e-18!34;UBERON:0001049!4.90e-17!52;UBERON:0005068!4.90e-17!52;UBERON:0006241!4.90e-17!52;UBERON:0007135!4.90e-17!52;UBERON:0002791!1.08e-15!29;UBERON:0003528!1.08e-15!29;UBERON:0001893!1.08e-15!29;UBERON:0000955!1.79e-15!50;UBERON:0006238!1.79e-15!50;UBERON:0003080!2.81e-15!40;UBERON:0002616!6.01e-15!49;UBERON:0002780!1.17e-14!39;UBERON:0001890!1.17e-14!39;UBERON:0006240!1.17e-14!39;UBERON:0003056!4.28e-13!49;UBERON:0000033!9.95e-13!63;UBERON:0001017!1.37e-12!73;UBERON:0005743!1.37e-12!73;UBERON:0000073!4.34e-12!75;UBERON:0001016!4.34e-12!75;UBERON:0002346!3.57e-11!71;UBERON:0003075!3.57e-11!71;UBERON:0007284!3.57e-11!71;UBERON:0000956!5.69e-11!21;UBERON:0001869!5.69e-11!21;UBERON:0000203!5.69e-11!21;UBERON:0002619!8.31e-09!17;UBERON:0004121!1.12e-08!102;UBERON:0000924!1.12e-08!102;UBERON:0006601!1.12e-08!102;UBERON:0002021!2.46e-08!10;UBERON:0000411!2.46e-08!10;UBERON:0001950!2.46e-08!10
|ontology_enrichment_uberon=UBERON:0002020!9.22e-18!34;UBERON:0001049!4.90e-17!52;UBERON:0005068!4.90e-17!52;UBERON:0006241!4.90e-17!52;UBERON:0007135!4.90e-17!52;UBERON:0002791!1.08e-15!29;UBERON:0003528!1.08e-15!29;UBERON:0001893!1.08e-15!29;UBERON:0000955!1.79e-15!50;UBERON:0006238!1.79e-15!50;UBERON:0003080!2.81e-15!40;UBERON:0002616!6.01e-15!49;UBERON:0002780!1.17e-14!39;UBERON:0001890!1.17e-14!39;UBERON:0006240!1.17e-14!39;UBERON:0003056!4.28e-13!49;UBERON:0000033!9.95e-13!63;UBERON:0001017!1.37e-12!73;UBERON:0005743!1.37e-12!73;UBERON:0000073!4.34e-12!75;UBERON:0001016!4.34e-12!75;UBERON:0002346!3.57e-11!71;UBERON:0003075!3.57e-11!71;UBERON:0007284!3.57e-11!71;UBERON:0000956!5.69e-11!21;UBERON:0001869!5.69e-11!21;UBERON:0000203!5.69e-11!21;UBERON:0002619!8.31e-09!17;UBERON:0004121!1.12e-08!102;UBERON:0000924!1.12e-08!102;UBERON:0006601!1.12e-08!102;UBERON:0002021!2.46e-08!10;UBERON:0000411!2.46e-08!10;UBERON:0001950!2.46e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.03e-31,29;UBERON:0002791,1.03e-31,29;UBERON:0001893,1.03e-31,29;UBERON:0002020,1.05e-28,34;UBERON:0003080,1.17e-28,40;UBERON:0000073,2.33e-27,54;UBERON:0002780,5.04e-27,39;UBERON:0001890,5.04e-27,39;UBERON:0006240,5.04e-27,39;UBERON:0002616,3.37e-26,46;UBERON:0000955,1.66e-25,47;UBERON:0006238,1.66e-25,47;UBERON:0001049,2.53e-24,52;UBERON:0005068,2.53e-24,52;UBERON:0006241,2.53e-24,52;UBERON:0007135,2.53e-24,52;UBERON:0003056,2.90e-22,49;UBERON:0001017,1.28e-21,73;UBERON:0002021,1.62e-21,10;UBERON:0000411,1.62e-21,10;UBERON:0001950,1.62e-21,10;UBERON:0000956,4.34e-21,21;UBERON:0001869,4.34e-21,21;UBERON:0000203,4.34e-21,21;UBERON:0001016,7.52e-21,75;UBERON:0002346,1.53e-18,64;UBERON:0003075,1.53e-18,64;UBERON:0007284,1.53e-18,64;UBERON:0002619,2.94e-17,17;UBERON:0010371,1.85e-15,73;UBERON:0004121,6.06e-15,95;UBERON:0000924,6.06e-15,95;UBERON:0006601,6.06e-15,95;UBERON:0002420,1.15e-11,8;UBERON:0007245,1.15e-11,8;UBERON:0010009,1.15e-11,8;UBERON:0010011,1.15e-11,8;UBERON:0000454,1.15e-11,8;UBERON:0010314,5.95e-11,92;UBERON:0000369,4.48e-10,5;UBERON:0002435,4.48e-10,5;UBERON:0000204,4.48e-10,5;UBERON:0010082,4.48e-10,5;UBERON:0000025,1.40e-08,114;UBERON:0004111,1.34e-07,122
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0,0,0,0,0.239316476986009,0,0,0,0.404950534779652,0.699561878128147,0,0,0,57.9995238830296,0,0.261199789138935,0,0,0,0,0,0.190023419456374,0,0,0.635030673459631,0.61506478758457,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.5869729378161,1.26766280701236,0,0,0.449949858640699,0,0,0,0,1.34796496001021,1.08004750665353,0.630974884054146,0.856952953211411,0.441737081903227,0.857435594504678,0.766763768145891,0.919218786610021,0,1.40456071893706,2.30409799884365,1.18697658957174,1.46380229763855,1.04182674111352,0.837548997004143,1.12552522006336,1.98637722109853,0.589257170947335,0.711858403995515,1.1183966749518,0.151452386666368,0,0,0,0,0,0,0,8.28622078777336,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,6.73684890342454,0,0,0,0,0.230615497256059,0,0,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0,0,0,0,0,1.64769703345305,2.74500361691176,1.88481528169297,4.34560800480691,4.60287823194595,2.28566849015516,2.27137768294861,0.101839363850316,0.248813941220186,9.60346482047964,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.2562274405697,0.281105173679186,0.258703370739016,0.215567992932842,0.189106080167819,0.527853372491847,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0.492502392237286,0.243206428637567,0.292399974850665,0,0.402619256281115,2.94405927989778,2.88132914661996,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0.898819408654221,0.648414149624083,0.199141273254367,0,0.456994050438915,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0.296452627087149,0.333690211432188,0.393117990226406,0.449724224769707,0.608580364165509,0.241177159752417,0,0,0,0.549122826376163,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,1.12385412991454,0.703270119553219,0.163934945376675,0.252470927204373,0,0,0,0.238968797952552,0,0,0,0,0,0.963963949265421,0,0.178065603667255,0,0.164970122972535,0,0,0.604647113929502,0.188605079755898,0,0.614870295887855,0,0.363533729477506,0.356497378384721,0,0,0,0.680879211507576,0,0.129358683782755,0.428674070063185,0,0.178368817602071,0,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.482503399425247,0.119372344003136,0.328281799490123,0,0.741701208042039,0.170870880797853,0.412773735926445,0.185194527369712,0,0.27338845544205,0.228778173206523,0.169978429993855,0.139951452323658,0.138199973804424,0.954670618015114,0,0.609958401380546,0.108005340821801,0.209088296014469,0.436725127492355,0,0.0826534557253359,0,0.129614973291793,0,535.508291749981,0,0,0,0.258319646955462,0,0.117357238645754,0.5208175393758,0.419437377702843,1.93267296660805,82.9526418022653,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0,0.36630324853453,0.214368379079066,0,2.82375921308533,1.84130094602871,5.15605962095457,2.40594455281163,2.05524755931193,1.5107877947794,3.37511250115903,5.40385443869065,3.17199686288943,4.14208249401456,0.103787347584177,0,0.853668028770671,0.729320151204882,0.419226325255965,0.735374033800057,0.888986911206461,0.412070114477788,0.962757628775446,0,0.760437899670719,0.754505365544305,0.280924522409647,0.384150914429216,0.17230640686684,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0.532427418478012,0.715308569841963,0.145346416632329,0.470546902076653,0.169229215783353,0.365855945745545,0,0.135804113845862,1.12228454331548,0.711810108745045,0.29551344712669,1.22769312950907,0.464810523557898,0.192906610981141,1.24905288968973,0.467863216890817,0,0.191288332068843,0,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0,0,0,0,0.239316476986009,0,0,0,0.404950534779652,0.699561878128147,0,0,0,57.9995238830296,0,0.261199789138935,0,0,0,0,0,0.190023419456374,0,0,0.635030673459631,0.61506478758457,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.5869729378161,1.26766280701236,0,0,0.449949858640699,0,0,0,0,1.34796496001021,1.08004750665353,0.630974884054146,0.856952953211411,0.441737081903227,0.857435594504678,0.766763768145891,0.919218786610021,0,1.40456071893706,2.30409799884365,1.18697658957174,1.46380229763855,1.04182674111352,0.837548997004143,1.12552522006336,1.98637722109853,0.589257170947335,0.711858403995515,1.1183966749518,0.151452386666368,0,0,0,0,0,0,0,8.28622078777336,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,6.73684890342454,0,0,0,0,0.230615497256059,0,0,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0,0,0,0,0,1.64769703345305,2.74500361691176,1.88481528169297,4.34560800480691,4.60287823194595,2.28566849015516,2.27137768294861,0.101839363850316,0.248813941220186,9.60346482047964,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.2562274405697,0.281105173679186,0.258703370739016,0.215567992932842,0.189106080167819,0.527853372491847,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0.492502392237286,0.243206428637567,0.292399974850665,0,0.402619256281115,2.94405927989778,2.88132914661996,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0.898819408654221,0.648414149624083,0.199141273254367,0,0.456994050438915,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0.296452627087149,0.333690211432188,0.393117990226406,0.449724224769707,0.608580364165509,0.241177159752417,0,0,0,0.549122826376163,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,1.12385412991454,0.703270119553219,0.163934945376675,0.252470927204373,0,0,0,0.238968797952552,0,0,0,0,0,0.963963949265421,0,0.178065603667255,0,0.164970122972535,0,0,0.604647113929502,0.188605079755898,0,0.614870295887855,0,0.363533729477506,0.356497378384721,0,0,0,0.680879211507576,0,0.129358683782755,0.428674070063185,0,0.178368817602071,0,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.482503399425247,0.119372344003136,0.328281799490123,0,0.741701208042039,0.170870880797853,0.412773735926445,0.185194527369712,0,0.27338845544205,0.228778173206523,0.169978429993855,0.139951452323658,0.138199973804424,0.954670618015114,0,0.609958401380546,0.108005340821801,0.209088296014469,0.436725127492355,0,0.0826534557253359,0,0.129614973291793,0,535.508291749981,0,0,0,0.258319646955462,0,0.117357238645754,0.5208175393758,0.419437377702843,1.93267296660805,82.9526418022653,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0,0.36630324853453,0.214368379079066,0,2.82375921308533,1.84130094602871,5.15605962095457,2.40594455281163,2.05524755931193,1.5107877947794,3.37511250115903,5.40385443869065,3.17199686288943,4.14208249401456,0.103787347584177,0,0.853668028770671,0.729320151204882,0.419226325255965,0.735374033800057,0.888986911206461,0.412070114477788,0.962757628775446,0,0.760437899670719,0.754505365544305,0.280924522409647,0.384150914429216,0.17230640686684,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0.532427418478012,0.715308569841963,0.145346416632329,0.470546902076653,0.169229215783353,0.365855945745545,0,0.135804113845862,1.12228454331548,0.711810108745045,0.29551344712669,1.22769312950907,0.464810523557898,0.192906610981141,1.24905288968973,0.467863216890817,0,0.191288332068843,0,0.231867835620421
|short_description=p2@Reep6
|short_description=p2@Reep6
}}
}}

Latest revision as of 09:48, 26 September 2015

Short description:p2@Reep6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Reep6_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 8bp_to_ENSMUST00000105354, ENSMUST00000105355, ENSMUST00000105357, ENSMUST00000105358_5end
EntrezGene:Reep6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Reep6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A358.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.29
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.74
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D54.35
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B29.60
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G5535.51
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E282.95
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.58e-1023
neuroblast (sensu Vertebrata)5.58e-1023

Uber anatomy
Ontology termp-valuen
brain grey matter1.03e-3129
regional part of telencephalon1.03e-3129
telencephalon1.03e-3129
gray matter1.05e-2834
anterior neural tube1.17e-2840
regional part of nervous system2.33e-2754
regional part of forebrain5.04e-2739
forebrain5.04e-2739
future forebrain5.04e-2739
regional part of brain3.37e-2646
brain1.66e-2547
future brain1.66e-2547
neural tube2.53e-2452
neural rod2.53e-2452
future spinal cord2.53e-2452
neural keel2.53e-2452
pre-chordal neural plate2.90e-2249
central nervous system1.28e-2173
occipital lobe1.62e-2110
visual cortex1.62e-2110
neocortex1.62e-2110
cerebral cortex4.34e-2121
cerebral hemisphere4.34e-2121
pallium4.34e-2121
nervous system7.52e-2175
neurectoderm1.53e-1864
neural plate1.53e-1864
presumptive neural plate1.53e-1864
regional part of cerebral cortex2.94e-1717
ecto-epithelium1.85e-1573
ectoderm-derived structure6.06e-1595
ectoderm6.06e-1595
presumptive ectoderm6.06e-1595
basal ganglion1.15e-118
nuclear complex of neuraxis1.15e-118
aggregate regional part of brain1.15e-118
collection of basal ganglia1.15e-118
cerebral subcortex1.15e-118
structure with developmental contribution from neural crest5.95e-1192
corpus striatum4.48e-105
striatum4.48e-105
ventral part of telencephalon4.48e-105
future corpus striatum4.48e-105
tube1.40e-08114
anatomical conduit1.34e-07122
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