Personal tools

FFCP PHASE1:Mm9::chrX:5977229..5977262,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=208431
|EntrezGene=208431
|HGNC=
|HGNC=
|MCL_coexpression_id=3757
|MCL_coexpression_id=3757
|TSSclassifier=NA
|UniProt=Q1W617
|UniProt=Q1W617
|association_with_transcript=0bp_to_NM_001040459,uc009sky.1_5end
|association_with_transcript=0bp_to_NM_001040459,uc009sky.1_5end
|cluster_id=chrX:5977229..5977262,+
|description=CAGE_peak_1_at_Shroom4_5end
|description=CAGE_peak_1_at_Shroom4_5end
|id=chrX:5977229..5977262,+
|id=chrX:5977229..5977262,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005157!3.09e-09!27;UBERON:0002048!1.54e-08!14;UBERON:0000117!1.54e-08!14;UBERON:0000171!1.54e-08!14;UBERON:0000170!1.54e-08!14;UBERON:0005597!1.54e-08!14;UBERON:0000118!1.54e-08!14;UBERON:0005178!9.06e-08!17;UBERON:0005181!9.06e-08!17;UBERON:0002224!9.06e-08!17;UBERON:0000915!9.06e-08!17;UBERON:0008947!9.06e-08!17;UBERON:0003258!9.06e-08!17;UBERON:0000468!3.85e-07!333
|ontology_enrichment_uberon=UBERON:0005157!3.09e-09!27;UBERON:0002048!1.54e-08!14;UBERON:0000117!1.54e-08!14;UBERON:0000171!1.54e-08!14;UBERON:0000170!1.54e-08!14;UBERON:0005597!1.54e-08!14;UBERON:0000118!1.54e-08!14;UBERON:0005178!9.06e-08!17;UBERON:0005181!9.06e-08!17;UBERON:0002224!9.06e-08!17;UBERON:0000915!9.06e-08!17;UBERON:0008947!9.06e-08!17;UBERON:0003258!9.06e-08!17;UBERON:0000468!3.85e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.57e-09,14;UBERON:0000117,2.57e-09,14;UBERON:0000171,2.57e-09,14;UBERON:0000170,2.57e-09,14;UBERON:0005597,2.57e-09,14;UBERON:0000118,2.57e-09,14;UBERON:0005178,1.83e-08,17;UBERON:0005181,1.83e-08,17;UBERON:0002224,1.83e-08,17;UBERON:0000915,1.83e-08,17;UBERON:0008947,1.83e-08,17;UBERON:0003258,1.83e-08,17;UBERON:0005157,3.37e-08,20;UBERON:0005153,4.51e-07,17;UBERON:0002113,5.17e-07,14;UBERON:0003918,5.17e-07,14;UBERON:0011143,5.17e-07,14;UBERON:0005095,5.17e-07,14;UBERON:0007687,5.17e-07,14
|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0.288851619751275,0.498703936075477,0.204169356262369,0,0,0,0,0,0,1.6366586336825,1.21652317463417,1.83546752161682,2.34717403304412,0.436050312760893,0.439372365468944,0.58328969722285,1.53985063787899,0,0,0,0,1.02903774414379,0.286533439938757,1.54701627683233,0.809265843438391,1.5869729378161,0.633831403506179,3.04960078862219,0,0,0,0,1.19840044207362,0.384218305321555,0.725827286159344,0.405017814995072,0.841299845405528,0.285650984403804,0.441737081903227,0.122490799214954,0.479227355091182,0,1.10115880999389,0.255374676170375,0.153606533256243,0.395658863190582,0.640413505216868,1.04182674111352,0.837548997004143,0.56276261003168,0.916789486660861,0.883885756421003,1.42371680799103,0.559198337475902,1.8931548333296,2.49386148352392,6.37701875143691,1.72084775396277,0,0.539703191637817,0,0,0.561777680527007,1.02258193546835,0.779358013808606,0.35333957451034,2.53518155598025,0,0,0,1.08245520505607,1.52015919285059,1.51657333504435,2.8545969929765,0.517875767294343,4.30482203287992,3.29622120855658,2.74018930480927,2.53677046981664,3.16517545160507,3.05730638552832,1.25666591329675,3.70792451601561,1.44599356919912,0,1.61766849947409,0,0.969750506270444,0,0.585561594023094,0.209446706813455,0,0.11981512450592,0,0,0.599162557619291,0.457500602818626,0.753926112677186,0.521472960576829,0.255715457330331,0.62336413367868,0.811206315338788,3.66621709861139,1.24406970610093,1.76905930903572,0.210441855886474,4.29397461776922,2.29902104433473,3.06105620669094,1.9591626318643,2.38127747029647,1.2811372028485,1.3118241438362,2.32833033665114,6.25147179505242,11.1572587299013,4.92663147659057,3.28793598641362,4.17070873838397,4.179025998266,2.05782136407943,4.77682240364384,0,0,0,2.07125772535502,3.98694301967864,3.42117916775928,3.07768156260773,2.75469924446365,1.85120535464854,3.0229412817553,3.21928081679543,1.5179494507732,1.6455984991348,1.47750717671186,1.4592385718254,1.60819986167866,1.3173006917463,2.14730270016595,1.47202963994889,1.3377599609307,0,0,4.47905326123991,4.64473343720877,2.57734922644187,2.01683524623343,0.667134131534611,0.380451252225118,0.474529061544512,0.988193728344065,0.502670417600539,1.1937388322469,0.38992817423824,1.79763881730844,0,0.796565093017469,1.89667900953082,4.11294645395024,6.76246414038483,5.29493452397817,6.59438456369928,16.9728684134571,20.7415841767564,22.2891323449199,23.3928104483648,23.3220639812203,0,1.00107063429656,0.589676985339609,0.899448449539415,0.811440485554012,0,0.50925170356284,0.287696137450811,0.486405680325106,1.09824565275233,1.43768206527355,0.372140947668503,0.312037673114561,0.505157755894224,0.717589654087649,0.482443521363367,2.77129785249907,4.35830247072115,4.23708938749267,3.73439188705414,6.10194645550105,10.5528942188344,9.75978927632656,7.21994497073856,7.88175720530955,5.97954662051692,7.49437412690189,4.26044618260919,4.31712454664739,2.89298117163023,0,0,0,1.37968373152366,0.963303539926752,0.117211686592203,2.62295912602681,0.504941854408746,2.52406575533005,3.90438744296638,4.09304455692318,3.82350076724083,6.01556420022464,6.51076020814315,4.04810701674894,3.50707029493574,4.74345333535828,1.28528526568723,1.27746076687442,2.67098405500883,3.4206261464251,2.63952196756057,1.32745138339963,1.45668381692989,1.51161778482376,1.13163047853539,0.590603785761546,0.614870295887855,1.55056975900933,2.18120237686503,1.06949213515416,1.26414703174326,0,0,0.680879211507576,3.24109969256358,1.29358683782755,3.42939256050548,3.90148514013002,3.0322698992352,2.46823530903181,0.608929898229199,7.27482294997502,13.7690846061483,0.882113592219848,1.31909002353184,2.42196640043858,2.17126529741361,1.90995750405018,1.47726809770555,0.874442509889552,0.741701208042039,0.170870880797853,1.44470807574256,0.555583582109135,0.188368457004691,0.136694227721025,0,0.679913719975421,0.279902904647316,0,0,4.4287039101359,2.64315307264903,2.16010681643603,0.627264888043406,0.87345025498471,1.75323650300267,0.991841468704031,0,0.648074866458964,1.24267862617385,0,3.58839710505549,3.47462829959905,3.88902376688095,3.22899558694328,2.02747350588934,3.63807439801837,3.77592716047455,2.41176492179135,0.483168241652012,0,0.316011120628178,1.01362607645082,1.23253148597793,0.51968329191118,0.358053391334963,0.39736270956253,0.360586348559907,0.147689527174577,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,1.36038230169127,4.21773311410723,2.87084341150322,5.03653849092235,0.772758376128762,1.31377732815827,1.09890974560359,0.857473516316263,1.00314420807073,0,0.920650473014354,0,0.515559547031063,0,0,0,0,0.453142408984205,0,3.32119512269365,9.17757208822371,4.09760653809922,3.16038732188782,1.46729213839588,0.735374033800057,2.889207461421,3.29656091582231,3.20919209591815,1.26348605881899,4.05566879824384,3.58390048633545,2.34103768674706,2.04880487695582,2.69946704091382,3.33405583898152,3.36064545240081,2.31491064556446,2.06042950401653,2.64958056241915,1.37147700954166,2.12970967391205,3.09967046931517,2.76158191601424,2.82328141245992,1.86152137361688,2.37806364734604,3.15683653725411,2.17286582153379,2.24456908663095,2.49133538060766,3.15214343601803,3.6830793885272,2.16911577660352,2.3148793317737,1.74867404556562,2.10538447600868,2.14871054048298,1.53030665655075,0.661774257358546,0.927471342481686
|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0.288851619751275,0.498703936075477,0.204169356262369,0,0,0,0,0,0,1.6366586336825,1.21652317463417,1.83546752161682,2.34717403304412,0.436050312760893,0.439372365468944,0.58328969722285,1.53985063787899,0,0,0,0,1.02903774414379,0.286533439938757,1.54701627683233,0.809265843438391,1.5869729378161,0.633831403506179,3.04960078862219,0,0,0,0,1.19840044207362,0.384218305321555,0.725827286159344,0.405017814995072,0.841299845405528,0.285650984403804,0.441737081903227,0.122490799214954,0.479227355091182,0,1.10115880999389,0.255374676170375,0.153606533256243,0.395658863190582,0.640413505216868,1.04182674111352,0.837548997004143,0.56276261003168,0.916789486660861,0.883885756421003,1.42371680799103,0.559198337475902,1.8931548333296,2.49386148352392,6.37701875143691,1.72084775396277,0,0.539703191637817,0,0,0.561777680527007,1.02258193546835,0.779358013808606,0.35333957451034,2.53518155598025,0,0,0,1.08245520505607,1.52015919285059,1.51657333504435,2.8545969929765,0.517875767294343,4.30482203287992,3.29622120855658,2.74018930480927,2.53677046981664,3.16517545160507,3.05730638552832,1.25666591329675,3.70792451601561,1.44599356919912,0,1.61766849947409,0,0.969750506270444,0,0.585561594023094,0.209446706813455,0,0.11981512450592,0,0,0.599162557619291,0.457500602818626,0.753926112677186,0.521472960576829,0.255715457330331,0.62336413367868,0.811206315338788,3.66621709861139,1.24406970610093,1.76905930903572,0.210441855886474,4.29397461776922,2.29902104433473,3.06105620669094,1.9591626318643,2.38127747029647,1.2811372028485,1.3118241438362,2.32833033665114,6.25147179505242,11.1572587299013,4.92663147659057,3.28793598641362,4.17070873838397,4.179025998266,2.05782136407943,4.77682240364384,0,0,0,2.07125772535502,3.98694301967864,3.42117916775928,3.07768156260773,2.75469924446365,1.85120535464854,3.0229412817553,3.21928081679543,1.5179494507732,1.6455984991348,1.47750717671186,1.4592385718254,1.60819986167866,1.3173006917463,2.14730270016595,1.47202963994889,1.3377599609307,0,0,4.47905326123991,4.64473343720877,2.57734922644187,2.01683524623343,0.667134131534611,0.380451252225118,0.474529061544512,0.988193728344065,0.502670417600539,1.1937388322469,0.38992817423824,1.79763881730844,0,0.796565093017469,1.89667900953082,4.11294645395024,6.76246414038483,5.29493452397817,6.59438456369928,16.9728684134571,20.7415841767564,22.2891323449199,23.3928104483648,23.3220639812203,0,1.00107063429656,0.589676985339609,0.899448449539415,0.811440485554012,0,0.50925170356284,0.287696137450811,0.486405680325106,1.09824565275233,1.43768206527355,0.372140947668503,0.312037673114561,0.505157755894224,0.717589654087649,0.482443521363367,2.77129785249907,4.35830247072115,4.23708938749267,3.73439188705414,6.10194645550105,10.5528942188344,9.75978927632656,7.21994497073856,7.88175720530955,5.97954662051692,7.49437412690189,4.26044618260919,4.31712454664739,2.89298117163023,0,0,0,1.37968373152366,0.963303539926752,0.117211686592203,2.62295912602681,0.504941854408746,2.52406575533005,3.90438744296638,4.09304455692318,3.82350076724083,6.01556420022464,6.51076020814315,4.04810701674894,3.50707029493574,4.74345333535828,1.28528526568723,1.27746076687442,2.67098405500883,3.4206261464251,2.63952196756057,1.32745138339963,1.45668381692989,1.51161778482376,1.13163047853539,0.590603785761546,0.614870295887855,1.55056975900933,2.18120237686503,1.06949213515416,1.26414703174326,0,0,0.680879211507576,3.24109969256358,1.29358683782755,3.42939256050548,3.90148514013002,3.0322698992352,2.46823530903181,0.608929898229199,7.27482294997502,13.7690846061483,0.882113592219848,1.31909002353184,2.42196640043858,2.17126529741361,1.90995750405018,1.47726809770555,0.874442509889552,0.741701208042039,0.170870880797853,1.44470807574256,0.555583582109135,0.188368457004691,0.136694227721025,0,0.679913719975421,0.279902904647316,0,0,4.4287039101359,2.64315307264903,2.16010681643603,0.627264888043406,0.87345025498471,1.75323650300267,0.991841468704031,0,0.648074866458964,1.24267862617385,0,3.58839710505549,3.47462829959905,3.88902376688095,3.22899558694328,2.02747350588934,3.63807439801837,3.77592716047455,2.41176492179135,0.483168241652012,0,0.316011120628178,1.01362607645082,1.23253148597793,0.51968329191118,0.358053391334963,0.39736270956253,0.360586348559907,0.147689527174577,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,1.36038230169127,4.21773311410723,2.87084341150322,5.03653849092235,0.772758376128762,1.31377732815827,1.09890974560359,0.857473516316263,1.00314420807073,0,0.920650473014354,0,0.515559547031063,0,0,0,0,0.453142408984205,0,3.32119512269365,9.17757208822371,4.09760653809922,3.16038732188782,1.46729213839588,0.735374033800057,2.889207461421,3.29656091582231,3.20919209591815,1.26348605881899,4.05566879824384,3.58390048633545,2.34103768674706,2.04880487695582,2.69946704091382,3.33405583898152,3.36064545240081,2.31491064556446,2.06042950401653,2.64958056241915,1.37147700954166,2.12970967391205,3.09967046931517,2.76158191601424,2.82328141245992,1.86152137361688,2.37806364734604,3.15683653725411,2.17286582153379,2.24456908663095,2.49133538060766,3.15214343601803,3.6830793885272,2.16911577660352,2.3148793317737,1.74867404556562,2.10538447600868,2.14871054048298,1.53030665655075,0.661774257358546,0.927471342481686
|short_description=p1@Shroom4
|short_description=p1@Shroom4
}}
}}

Latest revision as of 22:51, 1 October 2015

Short description:p1@Shroom4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Shroom4_5end
Coexpression cluster:MCL_coexpression_mm9:3757
Association with transcript: 0bp_to_NM_001040459, uc009sky.1_5end
EntrezGene:Shroom4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Shroom4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D91.89
Mouse Schwann, donor2.CNhs12573.11746-123F92.49
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.38
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.85
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D74.30
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F53.17
adrenal gland, neonate N00.CNhs11191.1311-23C13.06
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A83.71
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C64.29
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C62.38
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E26.25
forelimb, embryo E12.CNhs10600.359-14H211.16
forelimb, embryo E13.CNhs10589.384-1E24.93
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I64.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F53.99
heart, embryo E13.CNhs11013.376-3I93.42
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G33.22
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G11.46
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I54.48
intestine, embryo E13.CNhs11010.381-16D54.64
intestine, embryo E15.CNhs10602.976-16D82.58
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F84.11
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C76.59
kidney, neonate N00.CNhs11214.646-21G716.97
kidney, neonate N10.CNhs11206.758-6D520.74
kidney, neonate N20.CNhs11113.832-19I122.29
kidney, neonate N25.CNhs11122.1353-25F323.39
kidney, neonate N30.CNhs11203.1385-42H123.32
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B12.77
lung, embryo E12.CNhs10522.354-16G24.36
lung, embryo E14.CNhs10604.404-26F84.24
lung, embryo E15.CNhs11020.432-17C53.73
lung, embryo E16.CNhs10998.458-17B66.10
lung, embryo E17.CNhs10605.480-44A610.55
lung, embryo E18.CNhs10583.1287-20I69.76
lung, neonate N00.CNhs11224.640-42C67.22
lung, neonate N06.CNhs11212.683-20E57.88
lung, neonate N07.CNhs11111.715-19A35.98
lung, neonate N10.CNhs11219.750-23E67.49
lung, neonate N20.CNhs11109.822-18A44.26
lung, neonate N25.CNhs11119.1359-25C74.32
lung, neonate N30.CNhs11133.1394-42H22.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.62
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.09
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.82
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.02
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.51
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I43.42
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B93.90
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I77.27
placenta, adult pregnant day17.CNhs10464.577-18G313.77
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H32.17
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E34.43
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D42.16
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.59
testis, embryo E15.CNhs11034.443-27C53.47
testis, embryo E16.CNhs11033.470-26G53.89
testis, embryo E17.CNhs11029.486-18I53.23
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B73.64
testis, neonate N07.CNhs11222.726-26I43.78
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.87
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.04
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I83.32
whole body, embryo E12.CNhs10587.857-27C99.18
whole body, embryo E13.CNhs10512.372-23H24.10
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.15
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
lung2.57e-0914
respiratory tube2.57e-0914
respiration organ2.57e-0914
pair of lungs2.57e-0914
lung primordium2.57e-0914
lung bud2.57e-0914
thoracic cavity element1.83e-0817
thoracic segment organ1.83e-0817
thoracic cavity1.83e-0817
thoracic segment of trunk1.83e-0817
respiratory primordium1.83e-0817
endoderm of foregut1.83e-0817
epithelial fold3.37e-0820
epithelial bud4.51e-0717
kidney5.17e-0714
kidney mesenchyme5.17e-0714
upper urinary tract5.17e-0714
kidney rudiment5.17e-0714
kidney field5.17e-0714
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:5977229..5977262,%2B&oldid=4326513"