FFCP PHASE1:Hg19::chr2:152830507..152830516,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:152830507..152830516,-
|short_description=p10@CACNB4
|description=CAGE_peak_10_at_CACNB4_5end
|association_with_transcript=-22bp_to_ENST00000360283,ENST000...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=785 | |EntrezGene=785 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1404 | |HGNC=1404 | ||
|TSSclassifier=strong | |||
|UniProt=F8WA06,O00305 | |UniProt=F8WA06,O00305 | ||
|association_with_transcript=-22bp_to_ENST00000360283,ENST00000475848,NM_001005747,uc002txy.2,uc002tyb.2_5end | |||
|cluster_id=chr2:152830507..152830516,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_10_at_CACNB4_5end | |||
|id=chr2:152830507..152830516,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.66e-60;3!UBERON:0006241;6.56e-08;3!UBERON:0003057;6.56e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.06e-84!57;UBERON:0005068!7.06e-84!57;UBERON:0006241!7.06e-84!57;UBERON:0007135!7.06e-84!57;UBERON:0000073!1.45e-71!94;UBERON:0001016!1.45e-71!94;UBERON:0001017!9.94e-71!82;UBERON:0005743!4.50e-70!86;UBERON:0002616!2.30e-68!59;UBERON:0003075!3.56e-64!86;UBERON:0007284!3.56e-64!86;UBERON:0002346!7.47e-61!90;UBERON:0000955!1.16e-59!69;UBERON:0006238!1.16e-59!69;UBERON:0002780!1.74e-56!41;UBERON:0001890!1.74e-56!41;UBERON:0006240!1.74e-56!41;UBERON:0003080!5.49e-55!42;UBERON:0007023!2.33e-50!115;UBERON:0001893!2.33e-46!34;UBERON:0002020!5.46e-46!34;UBERON:0003528!5.46e-46!34;UBERON:0002791!1.21e-43!33;UBERON:0001869!1.91e-41!32;UBERON:0004121!1.62e-38!169;UBERON:0003056!2.50e-38!61;UBERON:0000924!2.32e-37!173;UBERON:0006601!2.32e-37!173;UBERON:0002619!1.40e-36!22;UBERON:0001950!1.41e-35!20;UBERON:0000033!4.45e-35!123;UBERON:0000153!5.60e-33!129;UBERON:0007811!5.60e-33!129;UBERON:0000956!7.81e-32!25;UBERON:0000203!7.81e-32!25;UBERON:0003076!2.17e-29!15;UBERON:0003057!2.17e-29!15;UBERON:0000025!5.99e-25!194;UBERON:0004733!4.30e-21!12;UBERON:0002028!4.30e-21!12;UBERON:0007277!4.30e-21!12;UBERON:0004732!2.51e-19!13;UBERON:0004111!6.20e-19!241;UBERON:0002298!1.10e-18!8;UBERON:0002308!1.43e-15!9;UBERON:0000125!1.43e-15!9;UBERON:0000477!3.85e-15!286;UBERON:0000483!5.57e-14!309;UBERON:0001871!5.82e-14!7;UBERON:0000119!9.83e-14!312;UBERON:0000200!3.43e-13!6;UBERON:0002680!6.64e-13!9;UBERON:0001895!6.64e-13!9;UBERON:0010092!6.64e-13!9;UBERON:0000064!3.10e-12!219;UBERON:0002420!1.90e-11!9;UBERON:0007245!1.90e-11!9;UBERON:0010009!1.90e-11!9;UBERON:0010011!1.90e-11!9;UBERON:0000454!1.90e-11!9;UBERON:0001894!2.69e-11!7;UBERON:0006222!2.69e-11!7;UBERON:0000475!8.91e-11!365;UBERON:0001872!9.47e-11!5;UBERON:0001896!9.76e-11!3;UBERON:0005290!9.76e-11!3;UBERON:0010096!9.76e-11!3;UBERON:0009663!1.19e-10!7;UBERON:0002240!2.05e-10!3;UBERON:0002021!2.63e-10!5;UBERON:0002771!4.24e-10!3;UBERON:0000988!5.12e-10!3;UBERON:0006331!1.75e-09!3;UBERON:0003296!4.12e-08!4;UBERON:0010133!4.12e-08!4;UBERON:0000369!1.16e-07!4;UBERON:0002435!1.16e-07!4;UBERON:0000204!1.16e-07!4;UBERON:0010082!1.16e-07!4;UBERON:0001905!2.02e-07!2;UBERON:0002757!2.02e-07!2;UBERON:0010134!2.02e-07!2;UBERON:0002784!2.02e-07!2;UBERON:0005408!2.02e-07!2;UBERON:0001899!2.02e-07!2;UBERON:0002360!2.09e-07!2;UBERON:0000094!2.09e-07!2;UBERON:0007645!2.09e-07!2;UBERON:0002148!5.71e-07!2;UBERON:0009662!5.71e-07!2;UBERON:0000062!7.91e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0004733;3.03e-41;12!UBERON:0002028;3.03e-41;12!UBERON:0004732;4.20e-38;13!UBERON:0002037;2.06e-30;6!UBERON:0001896;3.11e-27;3!UBERON:0005290;3.11e-27;3!UBERON:0003112;4.66e-21;1!UBERON:0011158;4.66e-21;1!UBERON:0003128;4.66e-21;1!UBERON:0001703;4.66e-21;1!UBERON:0002241;4.66e-21;1!UBERON:0002680;1.51e-20;9!UBERON:0001895;1.51e-20;9!UBERON:0002298;3.71e-14;6!UBERON:0000073;3.26e-12;53!UBERON:0002616;3.26e-12;53!UBERON:0000007;2.02e-11;2!UBERON:0000955;5.43e-10;68!UBERON:0001017;2.56e-09;75!UBERON:0002240;6.56e-08;3!UBERON:0005174;6.56e-08;3!UBERON:0001137;6.56e-08;3!UBERON:0001016;1.93e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,3.10e-47,15;UBERON:0003057,3.10e-47,15;UBERON:0004733,2.79e-41,12;UBERON:0002028,2.79e-41,12;UBERON:0007277,2.79e-41,12;UBERON:0004732,3.90e-38,13;UBERON:0002037,1.13e-30,6;UBERON:0006215,1.13e-30,6;UBERON:0001896,6.06e-27,3;UBERON:0005290,6.06e-27,3;UBERON:0010096,6.06e-27,3;UBERON:0001049,6.16e-22,56;UBERON:0005068,6.16e-22,56;UBERON:0006241,6.16e-22,56;UBERON:0007135,6.16e-22,56;UBERON:0003112,7.72e-21,1;UBERON:0011158,7.72e-21,1;UBERON:0003128,7.72e-21,1;UBERON:0001703,7.72e-21,1;UBERON:0002241,7.72e-21,1;UBERON:0004761,7.72e-21,1;UBERON:0009617,7.72e-21,1;UBERON:0002680,1.02e-20,9;UBERON:0001895,1.02e-20,9;UBERON:0010092,1.02e-20,9;UBERON:0000073,8.10e-18,53;UBERON:0002616,8.10e-18,53;UBERON:0001017,5.56e-15,81;UBERON:0003075,5.56e-15,82;UBERON:0007284,5.56e-15,82;UBERON:0002346,2.81e-14,86;UBERON:0002298,5.17e-14,6;UBERON:0000955,1.05e-13,68;UBERON:0006238,1.05e-13,68;UBERON:0001016,1.75e-13,89;UBERON:0010371,9.03e-12,104;UBERON:0010314,1.16e-11,132;UBERON:0000007,2.02e-11,2;UBERON:0005253,4.09e-11,2;UBERON:0007023,8.58e-11,114;UBERON:0002240,6.78e-08,3;UBERON:0005174,6.78e-08,3;UBERON:0001137,6.78e-08,3;UBERON:0004121,6.32e-07,171;UBERON:0000924,6.32e-07,171;UBERON:0006601,6.32e-07,171 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33732061132974,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,1.52581736317083,4.31259113731776,1.77328571372128,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539209063845416,0,0.234264445725339,0,0,0,0,0,1.22429104652196,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823040347426423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0.164831716762333,0.13480708770837,0,0,0,0.817220436669454,0,0,0,0,0,0.971992906528395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.258565912723101,0.39669780522807,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,1.14681839138014,0.443716206147409,1.1177352529449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76736622782191,0.323474434190045,0,0.109209638192014,0,0,0,0,0,0,0.80057074828547,0,0,0.642292250964595,0,0.319267718114302,0.615349092722265,0.504143392443436,0.622415272177961,1.13032951942296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.810451015420736,0.781078098613847,0.620060389503552,0.824405532520789,0,0,0,0,0,0.535701835878287,0.672567444437648,0,2.04895972216168,0.0887023701626388,0,0,0.815636795721981,0.526182188502793,0,0,0,0.314231179832004,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.452888530700021,0,0,0,0,0,1.17785080268967,0.594092800654172,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.951880862672806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33732061132974,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,1.52581736317083,4.31259113731776,1.77328571372128,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539209063845416,0,0.234264445725339,0,0,0,0,0,1.22429104652196,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823040347426423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0.164831716762333,0.13480708770837,0,0,0,0.817220436669454,0,0,0,0,0,0.971992906528395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.258565912723101,0.39669780522807,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,1.14681839138014,0.443716206147409,1.1177352529449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76736622782191,0.323474434190045,0,0.109209638192014,0,0,0,0,0,0,0.80057074828547,0,0,0.642292250964595,0,0.319267718114302,0.615349092722265,0.504143392443436,0.622415272177961,1.13032951942296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.810451015420736,0.781078098613847,0.620060389503552,0.824405532520789,0,0,0,0,0,0.535701835878287,0.672567444437648,0,2.04895972216168,0.0887023701626388,0,0,0.815636795721981,0.526182188502793,0,0,0,0.314231179832004,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.452888530700021,0,0,0,0,0,1.17785080268967,0.594092800654172,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.951880862672806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p10@CACNB4 | |||
}} | }} |
Latest revision as of 14:00, 17 September 2015
Short description: | p10@CACNB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CACNB4_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -22bp_to_ENST00000360283, ENST00000475848, NM_001005747, uc002txy.2, uc002tyb.2_5end |
EntrezGene: | CACNB4 |
HGNC: | 1404 |
UniProt: | F8WA06O00305 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data