FFCP PHASE1:Mm9::chrX:47150877..47150932,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=209268 | |EntrezGene=209268 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=248 | |MCL_coexpression_id=248 | ||
|TSSclassifier=NA | |||
|UniProt=Q7TQA1 | |UniProt=Q7TQA1 | ||
|association_with_transcript=0bp_to_ENSMUST00000033442,ENSMUST00000088847,ENSMUST00000114891,ENSMUST00000135492,NM_177591,NM_177915,uc009tdh.2,uc009tdj.2_5end | |association_with_transcript=0bp_to_ENSMUST00000033442,ENSMUST00000088847,ENSMUST00000114891,ENSMUST00000135492,NM_177591,NM_177915,uc009tdh.2,uc009tdj.2_5end | ||
|cluster_id=chrX:47150877..47150932,- | |||
|description=CAGE_peak_1_at_Igsf1_5end | |description=CAGE_peak_1_at_Igsf1_5end | ||
|id=chrX:47150877..47150932,- | |id=chrX:47150877..47150932,- | ||
|ontology_enrichment_celltype=CL:0000117!8.15e-08!23;CL:0000337!8.15e-08!23 | |ontology_enrichment_celltype=CL:0000117!8.15e-08!23;CL:0000337!8.15e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.05e-09,23;CL:0000337,9.05e-09,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.08e-12!73;UBERON:0005743!2.08e-12!73;UBERON:0000073!1.01e-11!75;UBERON:0001016!1.01e-11!75;UBERON:0001049!1.85e-11!52;UBERON:0005068!1.85e-11!52;UBERON:0006241!1.85e-11!52;UBERON:0007135!1.85e-11!52;UBERON:0004121!8.41e-11!102;UBERON:0000924!8.41e-11!102;UBERON:0006601!8.41e-11!102;UBERON:0002346!1.32e-10!71;UBERON:0003075!1.32e-10!71;UBERON:0007284!1.32e-10!71;UBERON:0002616!3.51e-10!49;UBERON:0000955!3.66e-10!50;UBERON:0006238!3.66e-10!50;UBERON:0003080!2.79e-09!40;UBERON:0000033!6.46e-09!63;UBERON:0002780!8.02e-09!39;UBERON:0001890!8.02e-09!39;UBERON:0006240!8.02e-09!39;UBERON:0000468!1.18e-08!333;UBERON:0003056!1.69e-08!49;UBERON:0000025!4.02e-08!114;UBERON:0001894!8.22e-08!10;UBERON:0006222!8.22e-08!10;UBERON:0000007!6.14e-07!8;UBERON:0003296!6.14e-07!8;UBERON:0010133!6.14e-07!8;UBERON:0004111!6.69e-07!122 | |ontology_enrichment_uberon=UBERON:0001017!2.08e-12!73;UBERON:0005743!2.08e-12!73;UBERON:0000073!1.01e-11!75;UBERON:0001016!1.01e-11!75;UBERON:0001049!1.85e-11!52;UBERON:0005068!1.85e-11!52;UBERON:0006241!1.85e-11!52;UBERON:0007135!1.85e-11!52;UBERON:0004121!8.41e-11!102;UBERON:0000924!8.41e-11!102;UBERON:0006601!8.41e-11!102;UBERON:0002346!1.32e-10!71;UBERON:0003075!1.32e-10!71;UBERON:0007284!1.32e-10!71;UBERON:0002616!3.51e-10!49;UBERON:0000955!3.66e-10!50;UBERON:0006238!3.66e-10!50;UBERON:0003080!2.79e-09!40;UBERON:0000033!6.46e-09!63;UBERON:0002780!8.02e-09!39;UBERON:0001890!8.02e-09!39;UBERON:0006240!8.02e-09!39;UBERON:0000468!1.18e-08!333;UBERON:0003056!1.69e-08!49;UBERON:0000025!4.02e-08!114;UBERON:0001894!8.22e-08!10;UBERON:0006222!8.22e-08!10;UBERON:0000007!6.14e-07!8;UBERON:0003296!6.14e-07!8;UBERON:0010133!6.14e-07!8;UBERON:0004111!6.69e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.00e-12,54;UBERON:0001017,1.61e-11,73;UBERON:0001049,2.37e-11,52;UBERON:0005068,2.37e-11,52;UBERON:0006241,2.37e-11,52;UBERON:0007135,2.37e-11,52;UBERON:0001016,1.12e-10,75;UBERON:0003080,2.28e-09,40;UBERON:0002346,4.87e-09,64;UBERON:0003075,4.87e-09,64;UBERON:0007284,4.87e-09,64;UBERON:0002780,7.34e-09,39;UBERON:0001890,7.34e-09,39;UBERON:0006240,7.34e-09,39;UBERON:0001894,9.13e-09,10;UBERON:0006222,9.13e-09,10;UBERON:0002616,1.13e-08,46;UBERON:0000955,1.13e-08,47;UBERON:0006238,1.13e-08,47;UBERON:0003056,2.87e-08,49;UBERON:0004121,5.17e-08,95;UBERON:0000924,5.17e-08,95;UBERON:0006601,5.17e-08,95;UBERON:0000007,9.23e-08,8;UBERON:0003296,9.23e-08,8;UBERON:0010133,9.23e-08,8;UBERON:0010371,4.33e-07,73 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,3.2703773457067,6.15121311656521,11.8602238435313,4.33957907038624,4.31257693094915,0,0,0,0,0,0,3.43937983461316,7.93486468908049,5.70448263155561,0.677689064138264,1.77858959222228,0,0,0,1.79760066311043,11.5265491596466,1.24427534770173,1.4850653216486,1.26194976810829,12.8542942981712,10.6016899656774,1.46988959057945,1.43768206527355,1.83843757322004,6.60695285996332,6.76742891851495,7.21950706304344,3.95658863190582,6.95306091378313,4.16730696445408,9.77140496504833,24.7615548413939,12.835052813252,7.07108605136802,10.1083893367363,4.84638559145781,0.151452386666368,0.226714680320357,1.44932244350839,0,1.3599426674155,0.539703191637817,0.649776417447669,0,0.842666520790511,0.170430322578058,0,0,1.97180787687353,0,0,0,0.649473123033642,0.253359865475099,0,0.45673551887624,0,1.03909497345377,5.20455980298408,6.39377504455497,5.99600292865752,3.91878865436819,2.11659672844269,0.125666591329675,6.42706916109372,0.289198713839823,0,9.86777784679196,0.441683036920787,0,0,0.585561594023094,0.83778682725382,0,0,0,0,8.68785708547972,3.20250421973039,3.01570445070875,2.08589184230732,0.255715457330331,9.76603809429932,6.65189178577806,1.32391173005411,0.746441823660558,0.252722758433675,0,1.56144531555244,1.14951052216736,1.62055916824814,2.41127708537144,0.612328492361951,1.7935920839879,1.87403449119458,0.517406741478031,0.862271971731369,1.13463648100692,0.351902248327898,0.876782929710299,1.39023624612799,2.78601733217733,1.85203922767149,0.59710280045548,0,0,0,1.86413195281952,2.81431271977315,0.180062061461015,1.18372367792605,0.787056926989615,0.617068451549513,1.16266972375204,0.536546802799238,0.233530684734339,0.16455984991348,0.492502392237286,0.162137619091711,0.292399974850665,0.219550115291051,0.268412837520744,6.09840850835969,2.57261530948211,0.330418782983798,0,2.77274725695804,2.55460339046482,1.9330119198314,0.403367049246685,0.444756087689741,0.760902504450237,0,0.164698954724011,0.502670417600539,0.397912944082302,0.779856348476481,0,0,0.199141273254367,2.46568271239006,3.42745537829186,4.50830942692322,1.4255592949172,1.35766741017338,1.82353131714828,0.632365371242573,0.590440591918409,0.156998727841375,0,0.592905254174298,46.7166296005063,54.4468416463572,55.9906659838286,44.2235064626936,47.2707233114737,32.0828573244589,23.0156909960649,19.6183624397793,11.5315793538994,4.31304619582064,5.58211421502755,3.43241440426017,0,0.358794827043824,0,0.184753190166605,1.13694847062291,1.62964976442026,0.848725428875941,1.87752198630802,2.34508760418542,2.85652369063216,3.31727201358258,1.89162172927429,0.8858587585951,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0.551873492609465,5.9403718295483,4.68846746368813,0,0.757412781613119,0,0.780877488593277,0.215423397732799,1.19484398976276,0.445597348164788,0.283076530788832,0.404810701674894,1.16902343164525,0.395287777946524,1.28528526568723,0.283880170416537,1.6025904330053,1.14020871547503,0.329940245945071,0,6.31229654002952,4.83717691143602,6.60117779145643,7.08724542913855,4.61152721915891,3.10113951801865,2.18120237686503,4.27796854061666,0.948110273807448,0,1.03135543248187,244.776076536974,24.1281866001956,50.061810623926,28.5068256592018,82.2858684100149,138.949308912013,133.778353749524,196.988822077146,2.3467170806371,23.9370240076117,0.220528398054962,0.8244312647074,0.807322133479528,1.32688434841943,0.238744688006273,0,0,4.63563255026274,0,2.06386867963222,0.555583582109135,0,0,0,0,0,0,0,1.73984796469624,3.65975040828328,0.756037385752609,1.46361807210128,0.87345025498471,1.21377911746339,1.07449492442937,0.26175594198403,0,0,0,0.747582730219894,1.32366792365678,2.91676782516071,2.97067593998782,3.04121025883401,3.28600268208111,1.0416350787516,0.419437377702843,0.241584120826006,0,0,0.405450430580328,0.616265742988964,0.25984164595559,0.179026695667481,0.39736270956253,0,0.443068581523732,0.100966449948148,0.0762068066549998,0,0,0,0.116876902181569,0.680191150845634,0,0,0,0.386379188064381,0.187682475451182,0,0,0,1.12950368523413,1.38097570952153,2.29158205375759,1.20297227640581,2.05524755931193,0.755393897389701,0.675022500231806,0,0.453142408984205,0.51776031175182,0.93408612825759,5.98537310101547,7.17081144167364,9.72426868273176,5.65955539095552,2.02227859295016,6.66740183404846,5.76898160268904,7.70206103020357,6.82282471762253,6.08350319736575,7.9223063382152,5.99305647807247,5.57018825922363,6.83482080571798,3.33405583898152,6.2577536010222,5.78727661391115,8.24171801606613,6.18235464564469,8.9146005620208,6.38912902173615,5.24559617884106,9.01147783120437,7.71696919405711,7.10762706290083,4.024415403201,6.57674278594607,7.60503037536826,7.85599180320834,5.45721083371201,6.89531376628944,8.59385190656348,5.88759996506671,9.25951732709479,3.99696924700713,6.78401664491684,5.58664740525576,5.16478496585877,9.26483960301965,4.63735671240843 | |phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,3.2703773457067,6.15121311656521,11.8602238435313,4.33957907038624,4.31257693094915,0,0,0,0,0,0,3.43937983461316,7.93486468908049,5.70448263155561,0.677689064138264,1.77858959222228,0,0,0,1.79760066311043,11.5265491596466,1.24427534770173,1.4850653216486,1.26194976810829,12.8542942981712,10.6016899656774,1.46988959057945,1.43768206527355,1.83843757322004,6.60695285996332,6.76742891851495,7.21950706304344,3.95658863190582,6.95306091378313,4.16730696445408,9.77140496504833,24.7615548413939,12.835052813252,7.07108605136802,10.1083893367363,4.84638559145781,0.151452386666368,0.226714680320357,1.44932244350839,0,1.3599426674155,0.539703191637817,0.649776417447669,0,0.842666520790511,0.170430322578058,0,0,1.97180787687353,0,0,0,0.649473123033642,0.253359865475099,0,0.45673551887624,0,1.03909497345377,5.20455980298408,6.39377504455497,5.99600292865752,3.91878865436819,2.11659672844269,0.125666591329675,6.42706916109372,0.289198713839823,0,9.86777784679196,0.441683036920787,0,0,0.585561594023094,0.83778682725382,0,0,0,0,8.68785708547972,3.20250421973039,3.01570445070875,2.08589184230732,0.255715457330331,9.76603809429932,6.65189178577806,1.32391173005411,0.746441823660558,0.252722758433675,0,1.56144531555244,1.14951052216736,1.62055916824814,2.41127708537144,0.612328492361951,1.7935920839879,1.87403449119458,0.517406741478031,0.862271971731369,1.13463648100692,0.351902248327898,0.876782929710299,1.39023624612799,2.78601733217733,1.85203922767149,0.59710280045548,0,0,0,1.86413195281952,2.81431271977315,0.180062061461015,1.18372367792605,0.787056926989615,0.617068451549513,1.16266972375204,0.536546802799238,0.233530684734339,0.16455984991348,0.492502392237286,0.162137619091711,0.292399974850665,0.219550115291051,0.268412837520744,6.09840850835969,2.57261530948211,0.330418782983798,0,2.77274725695804,2.55460339046482,1.9330119198314,0.403367049246685,0.444756087689741,0.760902504450237,0,0.164698954724011,0.502670417600539,0.397912944082302,0.779856348476481,0,0,0.199141273254367,2.46568271239006,3.42745537829186,4.50830942692322,1.4255592949172,1.35766741017338,1.82353131714828,0.632365371242573,0.590440591918409,0.156998727841375,0,0.592905254174298,46.7166296005063,54.4468416463572,55.9906659838286,44.2235064626936,47.2707233114737,32.0828573244589,23.0156909960649,19.6183624397793,11.5315793538994,4.31304619582064,5.58211421502755,3.43241440426017,0,0.358794827043824,0,0.184753190166605,1.13694847062291,1.62964976442026,0.848725428875941,1.87752198630802,2.34508760418542,2.85652369063216,3.31727201358258,1.89162172927429,0.8858587585951,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0.551873492609465,5.9403718295483,4.68846746368813,0,0.757412781613119,0,0.780877488593277,0.215423397732799,1.19484398976276,0.445597348164788,0.283076530788832,0.404810701674894,1.16902343164525,0.395287777946524,1.28528526568723,0.283880170416537,1.6025904330053,1.14020871547503,0.329940245945071,0,6.31229654002952,4.83717691143602,6.60117779145643,7.08724542913855,4.61152721915891,3.10113951801865,2.18120237686503,4.27796854061666,0.948110273807448,0,1.03135543248187,244.776076536974,24.1281866001956,50.061810623926,28.5068256592018,82.2858684100149,138.949308912013,133.778353749524,196.988822077146,2.3467170806371,23.9370240076117,0.220528398054962,0.8244312647074,0.807322133479528,1.32688434841943,0.238744688006273,0,0,4.63563255026274,0,2.06386867963222,0.555583582109135,0,0,0,0,0,0,0,1.73984796469624,3.65975040828328,0.756037385752609,1.46361807210128,0.87345025498471,1.21377911746339,1.07449492442937,0.26175594198403,0,0,0,0.747582730219894,1.32366792365678,2.91676782516071,2.97067593998782,3.04121025883401,3.28600268208111,1.0416350787516,0.419437377702843,0.241584120826006,0,0,0.405450430580328,0.616265742988964,0.25984164595559,0.179026695667481,0.39736270956253,0,0.443068581523732,0.100966449948148,0.0762068066549998,0,0,0,0.116876902181569,0.680191150845634,0,0,0,0.386379188064381,0.187682475451182,0,0,0,1.12950368523413,1.38097570952153,2.29158205375759,1.20297227640581,2.05524755931193,0.755393897389701,0.675022500231806,0,0.453142408984205,0.51776031175182,0.93408612825759,5.98537310101547,7.17081144167364,9.72426868273176,5.65955539095552,2.02227859295016,6.66740183404846,5.76898160268904,7.70206103020357,6.82282471762253,6.08350319736575,7.9223063382152,5.99305647807247,5.57018825922363,6.83482080571798,3.33405583898152,6.2577536010222,5.78727661391115,8.24171801606613,6.18235464564469,8.9146005620208,6.38912902173615,5.24559617884106,9.01147783120437,7.71696919405711,7.10762706290083,4.024415403201,6.57674278594607,7.60503037536826,7.85599180320834,5.45721083371201,6.89531376628944,8.59385190656348,5.88759996506671,9.25951732709479,3.99696924700713,6.78401664491684,5.58664740525576,5.16478496585877,9.26483960301965,4.63735671240843 | ||
|short_description=p1@Igsf1 | |short_description=p1@Igsf1 | ||
}} | }} |
Latest revision as of 21:20, 1 October 2015
Short description: | p1@Igsf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Igsf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:248 |
Association with transcript: | 0bp_to_ENSMUST00000033442, ENSMUST00000088847, ENSMUST00000114891, ENSMUST00000135492, NM_177591, NM_177915, uc009tdh.2, uc009tdj.2_5end |
EntrezGene: | Igsf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.05e-09 | 23 |
neuroblast (sensu Vertebrata) | 9.05e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.00e-12 | 54 |
central nervous system | 1.61e-11 | 73 |
neural tube | 2.37e-11 | 52 |
neural rod | 2.37e-11 | 52 |
future spinal cord | 2.37e-11 | 52 |
neural keel | 2.37e-11 | 52 |
nervous system | 1.12e-10 | 75 |
anterior neural tube | 2.28e-09 | 40 |
neurectoderm | 4.87e-09 | 64 |
neural plate | 4.87e-09 | 64 |
presumptive neural plate | 4.87e-09 | 64 |
regional part of forebrain | 7.34e-09 | 39 |
forebrain | 7.34e-09 | 39 |
future forebrain | 7.34e-09 | 39 |
diencephalon | 9.13e-09 | 10 |
future diencephalon | 9.13e-09 | 10 |
regional part of brain | 1.13e-08 | 46 |
brain | 1.13e-08 | 47 |
future brain | 1.13e-08 | 47 |
pre-chordal neural plate | 2.87e-08 | 49 |
ectoderm-derived structure | 5.17e-08 | 95 |
ectoderm | 5.17e-08 | 95 |
presumptive ectoderm | 5.17e-08 | 95 |
pituitary gland | 9.23e-08 | 8 |
gland of diencephalon | 9.23e-08 | 8 |
neuroendocrine gland | 9.23e-08 | 8 |
ecto-epithelium | 4.33e-07 | 73 |