MCL coexpression mm9:46: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{MCL_coexpression_mm9 | {{MCL_coexpression_mm9|coexpression_dpi_cluster_scores_mean=-0.000839246527371199,0.0426592601715918,0.0483434959941126,0.0170954182236479,0.0219756189626596,0.0373953430277248,0.0359164243348442,-0.00261899917667323,-0.00806222456750956,-0.00658563037065597,-0.0176129175616742,-0.0163047067300574,-0.0111057496262896,-0.012543034930946,-0.0052821427560716,-0.000349210708471228,-0.00959902265611794,0.00442680251639926,0.00358604476788695,0.000705561030429292,0.0626115339294909,-0.000540791503200934,-0.00203637270928096,0.0433936782173987,0.04541981404925,0.0366957154725011,0.0440549055527488,0.0469398745990256,0.0357756754156943,0.0259674812208217,0.0374481653730844,-0.0109771714671999,-0.0158629663306384,-0.0236664024961947,0.0140328367177052,0.0104380028689596,0.0131375789753838,0.00571606151118371,0.00206398841681113,0.00227429382974147,0.00888209207289893,0.00970492982333118,0.00414525492144163,0.013690657827216,0.0113743706607109,0.00872752365824397,0.026265519154267,0.00529047599312061,0.0171517127671913,0.0213041759349303,0.0240378184307737,0.00773376037901635,0.00225491334403272,-0.0103461422175047,-0.0028723953129702,0.0253478075157808,0.0336293679587978,0.0264120622525623,-0.0146011924387047,-0.0120898706390936,-0.0121624780133485,0.0137374497907066,0.0204024647434232,0.00794457822513996,0.00270105581488736,0.00701240606576537,0.0109732241509091,0.00721342922506899,-0.0142345526814812,-0.015116332853356,-0.0150358325042891,0.00405610541547729,0.00211615122816834,-0.0148849304384698,-0.0153629593141109,-0.0128308212041563,-0.00284315064091607,0.00239546943157906,0.000859140663125216,-0.0137254061065613,-0.0116494028857605,-0.0131269017255951,0.00292143337624744,0.00460221366236598,0.0108090359504822,0.00148057280598271,0.00239128949948407,-0.00718665604105339,0.0125779235232021,0.0150185030272642,0.0761875436226389,0.0152014675814169,0.0245887840267717,0.00857151228249891,0.0266396753472965,0.022487038927497,0.0464519726753132,8.06431185259582e-05,-0.00583197390732122,-0.00585142216408635,0.00526405263966266,-0.00308526918631044,-0.000652906679265983,-0.00124259469153569,0.0356058046429387,0.0364190755474951,0.0321399598493712,0.0616624180489336,0.0321373685367903,0.028572249312764,0.00992613836406775,0.0266374735633172,0.0316293273764741,0.0251457878531502,0.0373193392229588,0.0175041952597631,1.28354471256668,0.0487230151783686,0.0106242124093656,0.019010753029797,0.0182329969224176,0.0186000924916072,0.0324510943748499,0.00476126084506928,0.00463324825408655,0.0442194507938357,0.000136768926220469,-0.00664178573719891,-0.000953828192376722,0.00695298206784176,0.00934879075021761,-0.00761551956213102,0.00541488132170155,0.0048674249687482,0.00709464263393276,0.00918085781202309,0.0357036539069985,0.0403183859993613,0.0553169953924099,0.0347175632292138,-0.00491376929035805,-0.0058899312620106,-0.0023260934201284,0.0107735137495775,0.0148866519737806,0.00988969540209152,0.0114019107351999,0.0351072603564608,-0.008004288527777,0.00975549990345505,-0.00209992425670906,0.00281959849698141,0.0143780537214171,0.0325869580364084,0.0245512916945432,0.0124751135729489,-0.00683466987417044,-0.00894945673410175,-0.00643961133787702,0.00579992481149955,0.0105722091394171,0.00803986770249116,0.0119565848290423,0.0111576529085209,0.0144581614953442,0.0126239044406353,0.0109283984337756,0.0188835784344733,0.0106046080891659,0.0151403155775203,0.0188854692451914,0.0192032655467234,0.0186783460165907,0.0281343070376262,0.0075528074638505,0.0055825394515574,0.0456374111510124,0.0315658494974083,0.00135495783057756,0.00865162027798142,0.0209139333560131,0.0469465364513965,0.0607827007336731,0.0787617146878361,0.0466067619742065,0.090504921084179,0.0851003099129141,0.090109726168897,0.0885210099270837,0.04679530319273,0.0511063092308303,0.0594954109233914,0.0056427340746728,0.0211433702075726,0.0269502444008753,0.038940118191475,0.0531768314693459,0.0755044891723958,0.0709195762355046,0.085305262556664,0.0873975557201077,0.0924845754647919,0.0183851220497164,0.0110484304623437,0.00964479128948519,0.0133523036480184,0.0194691008021029,0.0316916631532816,0.058043238542943,0.0839060370438491,0.0574273323762138,0.0282477227938159,0.0506765888213347,0.0384100416015698,0.0340793367598675,0.0166415367573103,0.023044318789271,0.0261671854920679,0.0706812869042518,0.00121402667167964,0.0135307987124182,0.0132056229652264,0.0173572339529068,0.0322882481074586,0.0538552960160074,0.0776194285938444,0.0420386194384173,0.0461400244023712,0.0444557045226117,0.0629333286942319,0.0546408612066253,0.0672269954238261,0.00760588977881359,0.00986738704892309,0.0579782490660514,0.0484184829225062,0.0111355236092162,0.00994293485217453,0.00310352051081006,0.0202040464768961,0.00152249275780597,-0.001769231980338,0.00492573694662742,-0.00306949077196496,0.00355886023223002,-8.88140902421296e-05,-0.000313909815706769,0.00548414568824045,0.00617593741247428,-6.75892610775525e-05,0.0448070698600576,0.0216598770994431,0.0298360045204705,0.046700918331959,0.0316171060154,0.00926668163190427,0.0145286358933685,0.0299254511869069,0.0323682034246365,0.0457539487097494,0.0747883250105958,0.0342380867333518,0.0315897449707292,0.0333020525672498,0.0327446933810543,0.0230111624986074,0.013216966341325,-0.00172409271332522,-0.00251911878116071,0.00358020308860178,0.00484399736972573,0.0194437278807284,0.0220574544392141,0.0273976566970651,0.115979095434606,0.23948194537728,0.0315563893888551,0.0549438299153078,0.0439501111705331,0.0331956191326795,0.0415234462790748,0.0496746527980364,0.0705898507543126,0.0141879904718451,0.00869398779350071,0.0106844930026554,0.0161767943161801,0.00459338257280939,0.00277803534840285,0.0047212282553361,0.00551355164019024,0.0056821821902999,0.00686485854062019,0.0585617674567704,0.000883261035737583,0.0185514667350884,0.0282260273902788,0.0424216848192331,0.0614080806609424,0.0571861113614921,0.0611566467935492,0.0579047813090512,0.0467274374313939,0.0420418506903659,0.00536182168385607,0.0105891580472126,0.00861794735401118,0.0164843055387157,0.0194398775699759,0.0152981652615983,0.0220852988549273,0.0173718953443825,0.0212649694280057,0.0144438709908198,0.0173323307544557,0.00769812733203296,0.00603272436508162,0.0098150257043464,0.00940379241087064,0.00900202053244496,0.0142739167857861,0.00884088109053499,0.00773363976072482,0.00514482384647944,0.00512830409109526,0.00464522447215938,0.00905548772817118,0.00430544143341564,0.0088653615923317,0.0414066302935719,0.0290447077368643,0.0200422442145906,0.0328829981456644,0.0399179996069738,0.0962490808149485,0.0553526400433375,0.0446174094045711,0.0360872317736466,-0.000602090253069743,-0.00104685946602722,0.00335217854785777,0.000705218103781561,-0.00185385361456202,-0.00596985694907494,-0.000560018506953509,0.0035791357447185,0.00433311489997839,0.00128800565108511,-0.00912306410244017,-0.00176921970981103,0.00097545281736359,0.0202669038266133,0.00691653149619894,0.0165305125292418,0.0436378059317931,0.0433614029539808,0.0373495788573144,0.0387800084689166,0.0458186941158428,0.042668367425618,0.0457245095137696,0.0423692329615269,0.0423228794723982,0.0398666765661293,0.0379465345313075,0.0385621750779538,0.0358795681209827,0.0446745471412932,0.0420827067402639,0.0367629383311786,0.0393028742165072,0.0427344810822719,0.0442990115438585,0.0408609185699765,0.0421968738441672,0.0408113104659684,0.0439365519386011,0.0382083463523213,0.039764278421403,0.0367485648405667,0.0361385301757155,0.0397187803773598,0.0428958933731899,0.019666893419912,0.0457772777779224,0.0538067749760561,0.0381544584069986,0.025419470436416,0.0215395039197893|coexpression_dpi_cluster_scores_median=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17510589520209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.083442441818608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|gostat_on_MCL_coexpression=GO:0005903;brush border;0.032378544163893;65969,140494,17913!|ontology_enrichment_celltype=|ontology_enrichment_disease=|ontology_enrichment_uberon=UBERON:0005631!3.28e-58!3;UBERON:0000478!3.28e-58!3;UBERON:0000158!3.28e-58!3;UBERON:0000305!2.74e-44!1;UBERON:0001987!9.50e-23!2;UBERON:0003124!9.50e-23!2;UBERON:0004340!9.50e-23!2;UBERON:0004871!8.02e-16!3;UBERON:0005795!4.02e-12!4;UBERON:0000995!4.02e-12!4;UBERON:0003975!5.59e-10!5;UBERON:0004923!1.75e-08!24;UBERON:0003134!9.78e-07!8|tfbs_overrepresentation_for_novel_motifs=0.00314983,0.0512783,0.0177793,0.781511,1.03686,1.24977,0.0075638,0.57227,0.0994853,1.05327e-05,0.00251409,0.738032,0.00397637,0.000379584,1.9698,0,0.0460862,1.17498,0.284251,0.0777635,3.9523,0.0193278,0.00393539,1.28402,0.00348984,0.0172813,0.0741197,0.112825,0.000321997,0.269031,0.130662,0.233564,0.0026297,0.371642,0.00157249,0.000254018,4.21341e-08,0.0119292,0.125849,1.68827e-06,0.747449,0.0967282,1.54431,0.80423,0.00297831,0.00824178,0.00522996,0.0204367,2.39923,0.15805,0.0147952,0.0126977,0.380996,0.0306036,0.220294,0.371893,1.03771,0.0200012,0.502191,0.0015681,0.0513427,0.0019036,0.227298,0.0124648,0.002174,0.0531002,0.236411,1.34474,0.469541,0.254415,0.000221172,2.15032,3.27278e-12,0.463585,2.86095e-08,0.00283158,0.796478,0.00421105,0.0930957,0.657696,0.441143,0.0241196,0.793988,1.37459,0.00262337,0,2.23484e-07,0.0550965,0.300355,0.225297,0.328049,0.0171728,0.405872,0.128202,0.00223708,1.78536,0.617812,0.413331,0.118908,0.571583,1.11629,0.233066,1.36671,0.487545,0.85618,7.77804e-05,0.0113833,0.195309,0.034517,3.47267e-05,0.105665,0.0265209,0.237488,0.0497682,0.0367688,0.833972,5.12964e-11,0.0228217,0.266971,0.378992,0.276869,0.375491,0.248616,0.0569483,0.73914,0.0443527,0.566909,0.000979122,0.021591,0.104785,0.468076,0.480748,0.200604,0.0576475,0.370067,0.1147,0.195153,1.20947,0.299478,0.495602,0.20586,0.0226051,0.670173,0.584982,0.0336637,0.00551564,0.565711,0.463242,0.203079,0.0303367,0.00147163,0,0.0920447,0.0753706,0.313538,0.0123908,0.751699,2.44344,0.455409,9.25652e-05,0.132708,0.123885,0.846665,0.0691111,0.803729,0.136507,1.22867,0.455271,7.97415e-08|tfbs_overrepresentation_jaspar=MA0003.1;0,MA0004.1;0.0588369,MA0006.1;1.84822e-05,MA0007.1;4.03559,MA0009.1;2.17119,MA0014.1;0,MA0017.1;7.61982,MA0019.1;0.156837,MA0024.1;0.000679176,MA0025.1;0.629993,MA0027.1;0.940971,MA0028.1;1.19016e-06,MA0029.1;0.281049,MA0030.1;3.21448,MA0031.1;2.42352,MA0038.1;0.165964,MA0040.1;0.935806,MA0041.1;1.38449,MA0042.1;1.05014,MA0043.1;0.317959,MA0046.1;7.30244,MA0048.1;0.00174668,MA0050.1;0.0288067,MA0051.1;0.0203777,MA0052.1;0.973617,MA0055.1;0.0492428,MA0056.1;0,MA0057.1;0.000828703,MA0058.1;0.0222278,MA0059.1;0.0316751,MA0060.1;3.03887e-05,MA0061.1;0.723871,MA0063.1;0,MA0066.1;0.213828,MA0067.1;0.95336,MA0068.1;0.113691,MA0069.1;0.502538,MA0070.1;0.47435,MA0071.1;0.655427,MA0072.1;0.288777,MA0073.1;4.70177e-12,MA0074.1;3.55037,MA0076.1;3.58224e-05,MA0077.1;0.0679144,MA0078.1;0.0673505,MA0081.1;0.557273,MA0083.1;0.173525,MA0084.1;0.947323,MA0087.1;0.600964,MA0088.1;0.00156424,MA0089.1;0,MA0090.1;5.845,MA0091.1;0.75001,MA0092.1;0.643664,MA0093.1;0.0154103,MA0095.1;0,MA0098.1;0,MA0100.1;0.112363,MA0101.1;0.3688,MA0103.1;2.96967,MA0105.1;0.00140825,MA0106.1;0.290395,MA0107.1;0.185187,MA0108.2;0.594843,MA0109.1;0,MA0111.1;0.627004,MA0113.1;2.69192,MA0114.1;5.68052,MA0115.1;4.09352,MA0116.1;0.72583,MA0117.1;0.264745,MA0119.1;0.0904041,MA0122.1;0.300007,MA0124.1;0.264007,MA0125.1;0.0681696,MA0130.1;0,MA0131.1;0.0453751,MA0132.1;0,MA0133.1;0,MA0135.1;0.103874,MA0136.1;0.251547,MA0139.1;0.0323743,MA0140.1;0.238483,MA0141.1;0.308476,MA0142.1;1.06511,MA0143.1;0.811884,MA0144.1;10.3718,MA0145.1;0.18409,MA0146.1;1.89705e-09,MA0147.1;0.000142609,MA0148.1;6.31845,MA0149.1;1.67033,MA0062.2;4.69217e-06,MA0035.2;0.579736,MA0039.2;3.0793e-07,MA0138.2;0.217517,MA0002.2;0.639122,MA0137.2;13.1755,MA0104.2;8.9636e-06,MA0047.2;4.44886,MA0112.2;0.133007,MA0065.2;1.3922,MA0150.1;2.60426,MA0151.1;0,MA0152.1;0.924172,MA0153.1;2.53378,MA0154.1;0.432929,MA0155.1;0.00922863,MA0156.1;0.662392,MA0157.1;1.9639,MA0158.1;0,MA0159.1;0.937909,MA0160.1;0.127092,MA0161.1;0,MA0162.1;1.29798e-13,MA0163.1;9.00931e-10,MA0164.1;0.917229,MA0080.2;0.454942,MA0018.2;0.0487986,MA0099.2;9.06118,MA0079.2;0,MA0102.2;1.67974,MA0258.1;1.4064,MA0259.1;0.0100639,MA0442.1;0}} | ||
|coexpression_dpi_cluster_scores_mean=-0.000839246527371199,0.0426592601715918,0.0483434959941126,0.0170954182236479,0.0219756189626596,0.0373953430277248,0.0359164243348442,-0.00261899917667323,-0.00806222456750956,-0.00658563037065597,-0.0176129175616742,-0.0163047067300574,-0.0111057496262896,-0.012543034930946,-0.0052821427560716,-0.000349210708471228,-0.00959902265611794,0.00442680251639926,0.00358604476788695,0.000705561030429292,0.0626115339294909,-0.000540791503200934,-0.00203637270928096,0.0433936782173987,0.04541981404925,0.0366957154725011,0.0440549055527488,0.0469398745990256,0.0357756754156943,0.0259674812208217,0.0374481653730844,-0.0109771714671999,-0.0158629663306384,-0.0236664024961947,0.0140328367177052,0.0104380028689596,0.0131375789753838,0.00571606151118371,0.00206398841681113,0.00227429382974147,0.00888209207289893,0.00970492982333118,0.00414525492144163,0.013690657827216,0.0113743706607109,0.00872752365824397,0.026265519154267,0.00529047599312061,0.0171517127671913,0.0213041759349303,0.0240378184307737,0.00773376037901635,0.00225491334403272,-0.0103461422175047,-0.0028723953129702,0.0253478075157808,0.0336293679587978,0.0264120622525623,-0.0146011924387047,-0.0120898706390936,-0.0121624780133485,0.0137374497907066,0.0204024647434232,0.00794457822513996,0.00270105581488736,0.00701240606576537,0.0109732241509091,0.00721342922506899,-0.0142345526814812,-0.015116332853356,-0.0150358325042891,0.00405610541547729,0.00211615122816834,-0.0148849304384698,-0.0153629593141109,-0.0128308212041563,-0.00284315064091607,0.00239546943157906,0.000859140663125216,-0.0137254061065613,-0.0116494028857605,-0.0131269017255951,0.00292143337624744,0.00460221366236598,0.0108090359504822,0.00148057280598271,0.00239128949948407,-0.00718665604105339,0.0125779235232021,0.0150185030272642,0.0761875436226389,0.0152014675814169,0.0245887840267717,0.00857151228249891,0.0266396753472965,0.022487038927497,0.0464519726753132,8.06431185259582e-05,-0.00583197390732122,-0.00585142216408635,0.00526405263966266,-0.00308526918631044,-0.000652906679265983,-0.00124259469153569,0.0356058046429387,0.0364190755474951,0.0321399598493712,0.0616624180489336,0.0321373685367903,0.028572249312764,0.00992613836406775,0.0266374735633172,0.0316293273764741,0.0251457878531502,0.0373193392229588,0.0175041952597631,1.28354471256668,0.0487230151783686,0.0106242124093656,0.019010753029797,0.0182329969224176,0.0186000924916072,0.0324510943748499,0.00476126084506928,0.00463324825408655,0.0442194507938357,0.000136768926220469,-0.00664178573719891,-0.000953828192376722,0.00695298206784176,0.00934879075021761,-0.00761551956213102,0.00541488132170155,0.0048674249687482,0.00709464263393276,0.00918085781202309,0.0357036539069985,0.0403183859993613,0.0553169953924099,0.0347175632292138,-0.00491376929035805,-0.0058899312620106,-0.0023260934201284,0.0107735137495775,0.0148866519737806,0.00988969540209152,0.0114019107351999,0.0351072603564608,-0.008004288527777,0.00975549990345505,-0.00209992425670906,0.00281959849698141,0.0143780537214171,0.0325869580364084,0.0245512916945432,0.0124751135729489,-0.00683466987417044,-0.00894945673410175,-0.00643961133787702,0.00579992481149955,0.0105722091394171,0.00803986770249116,0.0119565848290423,0.0111576529085209,0.0144581614953442,0.0126239044406353,0.0109283984337756,0.0188835784344733,0.0106046080891659,0.0151403155775203,0.0188854692451914,0.0192032655467234,0.0186783460165907,0.0281343070376262,0.0075528074638505,0.0055825394515574,0.0456374111510124,0.0315658494974083,0.00135495783057756,0.00865162027798142,0.0209139333560131,0.0469465364513965,0.0607827007336731,0.0787617146878361,0.0466067619742065,0.090504921084179,0.0851003099129141,0.090109726168897,0.0885210099270837,0.04679530319273,0.0511063092308303,0.0594954109233914,0.0056427340746728,0.0211433702075726,0.0269502444008753,0.038940118191475,0.0531768314693459,0.0755044891723958,0.0709195762355046,0.085305262556664,0.0873975557201077,0.0924845754647919,0.0183851220497164,0.0110484304623437,0.00964479128948519,0.0133523036480184,0.0194691008021029,0.0316916631532816,0.058043238542943,0.0839060370438491,0.0574273323762138,0.0282477227938159,0.0506765888213347,0.0384100416015698,0.0340793367598675,0.0166415367573103,0.023044318789271,0.0261671854920679,0.0706812869042518,0.00121402667167964,0.0135307987124182,0.0132056229652264,0.0173572339529068,0.0322882481074586,0.0538552960160074,0.0776194285938444,0.0420386194384173,0.0461400244023712,0.0444557045226117,0.0629333286942319,0.0546408612066253,0.0672269954238261,0.00760588977881359,0.00986738704892309,0.0579782490660514,0.0484184829225062,0.0111355236092162,0.00994293485217453,0.00310352051081006,0.0202040464768961,0.00152249275780597,-0.001769231980338,0.00492573694662742,-0.00306949077196496,0.00355886023223002,-8.88140902421296e-05,-0.000313909815706769,0.00548414568824045,0.00617593741247428,-6.75892610775525e-05,0.0448070698600576,0.0216598770994431,0.0298360045204705,0.046700918331959,0.0316171060154,0.00926668163190427,0.0145286358933685,0.0299254511869069,0.0323682034246365,0.0457539487097494,0.0747883250105958,0.0342380867333518,0.0315897449707292,0.0333020525672498,0.0327446933810543,0.0230111624986074,0.013216966341325,-0.00172409271332522,-0.00251911878116071,0.00358020308860178,0.00484399736972573,0.0194437278807284,0.0220574544392141,0.0273976566970651,0.115979095434606,0.23948194537728,0.0315563893888551,0.0549438299153078,0.0439501111705331,0.0331956191326795,0.0415234462790748,0.0496746527980364,0.0705898507543126,0.0141879904718451,0.00869398779350071,0.0106844930026554,0.0161767943161801,0.00459338257280939,0.00277803534840285,0.0047212282553361,0.00551355164019024,0.0056821821902999,0.00686485854062019,0.0585617674567704,0.000883261035737583,0.0185514667350884,0.0282260273902788,0.0424216848192331,0.0614080806609424,0.0571861113614921,0.0611566467935492,0.0579047813090512,0.0467274374313939,0.0420418506903659,0.00536182168385607,0.0105891580472126,0.00861794735401118,0.0164843055387157,0.0194398775699759,0.0152981652615983,0.0220852988549273,0.0173718953443825,0.0212649694280057,0.0144438709908198,0.0173323307544557,0.00769812733203296,0.00603272436508162,0.0098150257043464,0.00940379241087064,0.00900202053244496,0.0142739167857861,0.00884088109053499,0.00773363976072482,0.00514482384647944,0.00512830409109526,0.00464522447215938,0.00905548772817118,0.00430544143341564,0.0088653615923317,0.0414066302935719,0.0290447077368643,0.0200422442145906,0.0328829981456644,0.0399179996069738,0.0962490808149485,0.0553526400433375,0.0446174094045711,0.0360872317736466,-0.000602090253069743,-0.00104685946602722,0.00335217854785777,0.000705218103781561,-0.00185385361456202,-0.00596985694907494,-0.000560018506953509,0.0035791357447185,0.00433311489997839,0.00128800565108511,-0.00912306410244017,-0.00176921970981103,0.00097545281736359,0.0202669038266133,0.00691653149619894,0.0165305125292418,0.0436378059317931,0.0433614029539808,0.0373495788573144,0.0387800084689166,0.0458186941158428,0.042668367425618,0.0457245095137696,0.0423692329615269,0.0423228794723982,0.0398666765661293,0.0379465345313075,0.0385621750779538,0.0358795681209827,0.0446745471412932,0.0420827067402639,0.0367629383311786,0.0393028742165072,0.0427344810822719,0.0442990115438585,0.0408609185699765,0.0421968738441672,0.0408113104659684,0.0439365519386011,0.0382083463523213,0.039764278421403,0.0367485648405667,0.0361385301757155,0.0397187803773598,0.0428958933731899,0.019666893419912,0.0457772777779224,0.0538067749760561,0.0381544584069986,0.025419470436416,0.0215395039197893 | |||
| | |||
}} |
Latest revision as of 14:34, 17 September 2013
Phase1 CAGE Peaks
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
GO ID | GO name | FDR corrected p-value |
---|---|---|
GO:0005903 | brush border | 0.032378544163893 |
Relative expression of the co-expression cluster over median <br>Analyst:
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.28e-58 | 3 |
extraembryonic structure | 3.28e-58 | 3 |
membranous layer | 3.28e-58 | 3 |
amnion | 2.74e-44 | 1 |
placenta | 9.50e-23 | 2 |
chorion | 9.50e-23 | 2 |
allantois | 9.50e-23 | 2 |
somatic layer of lateral plate mesoderm | 8.02e-16 | 3 |
embryonic uterus | 4.02e-12 | 4 |
uterus | 4.02e-12 | 4 |
internal female genitalia | 5.59e-10 | 5 |
organ component layer | 1.75e-08 | 24 |
female reproductive organ | 9.78e-07 | 8 |
TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
Motifs | -log10(p-value) |
---|---|
MA0003.1 | 0 |
MA0004.1 | 0.0588369 |
MA0006.1 | 1.84822e-05 |
MA0007.1 | 4.03559 |
MA0009.1 | 2.17119 |
MA0014.1 | 0 |
MA0017.1 | 7.61982 |
MA0019.1 | 0.156837 |
MA0024.1 | 0.000679176 |
MA0025.1 | 0.629993 |
MA0027.1 | 0.940971 |
MA0028.1 | 1.19016e-06 |
MA0029.1 | 0.281049 |
MA0030.1 | 3.21448 |
MA0031.1 | 2.42352 |
MA0038.1 | 0.165964 |
MA0040.1 | 0.935806 |
MA0041.1 | 1.38449 |
MA0042.1 | 1.05014 |
MA0043.1 | 0.317959 |
MA0046.1 | 7.30244 |
MA0048.1 | 0.00174668 |
MA0050.1 | 0.0288067 |
MA0051.1 | 0.0203777 |
MA0052.1 | 0.973617 |
MA0055.1 | 0.0492428 |
MA0056.1 | 0 |
MA0057.1 | 0.000828703 |
MA0058.1 | 0.0222278 |
MA0059.1 | 0.0316751 |
MA0060.1 | 3.03887e-05 |
MA0061.1 | 0.723871 |
MA0063.1 | 0 |
MA0066.1 | 0.213828 |
MA0067.1 | 0.95336 |
MA0068.1 | 0.113691 |
MA0069.1 | 0.502538 |
MA0070.1 | 0.47435 |
MA0071.1 | 0.655427 |
MA0072.1 | 0.288777 |
MA0073.1 | 4.70177e-12 |
MA0074.1 | 3.55037 |
MA0076.1 | 3.58224e-05 |
MA0077.1 | 0.0679144 |
MA0078.1 | 0.0673505 |
MA0081.1 | 0.557273 |
MA0083.1 | 0.173525 |
MA0084.1 | 0.947323 |
MA0087.1 | 0.600964 |
MA0088.1 | 0.00156424 |
MA0089.1 | 0 |
MA0090.1 | 5.845 |
MA0091.1 | 0.75001 |
MA0092.1 | 0.643664 |
MA0093.1 | 0.0154103 |
MA0095.1 | 0 |
MA0098.1 | 0 |
MA0100.1 | 0.112363 |
MA0101.1 | 0.3688 |
MA0103.1 | 2.96967 |
MA0105.1 | 0.00140825 |
MA0106.1 | 0.290395 |
MA0107.1 | 0.185187 |
MA0108.2 | 0.594843 |
MA0109.1 | 0 |
MA0111.1 | 0.627004 |
MA0113.1 | 2.69192 |
MA0114.1 | 5.68052 |
MA0115.1 | 4.09352 |
MA0116.1 | 0.72583 |
MA0117.1 | 0.264745 |
MA0119.1 | 0.0904041 |
MA0122.1 | 0.300007 |
MA0124.1 | 0.264007 |
MA0125.1 | 0.0681696 |
MA0130.1 | 0 |
MA0131.1 | 0.0453751 |
MA0132.1 | 0 |
MA0133.1 | 0 |
MA0135.1 | 0.103874 |
MA0136.1 | 0.251547 |
MA0139.1 | 0.0323743 |
MA0140.1 | 0.238483 |
MA0141.1 | 0.308476 |
MA0142.1 | 1.06511 |
MA0143.1 | 0.811884 |
MA0144.1 | 10.3718 |
MA0145.1 | 0.18409 |
MA0146.1 | 1.89705e-09 |
MA0147.1 | 0.000142609 |
MA0148.1 | 6.31845 |
MA0149.1 | 1.67033 |
MA0062.2 | 4.69217e-06 |
MA0035.2 | 0.579736 |
MA0039.2 | 3.0793e-07 |
MA0138.2 | 0.217517 |
MA0002.2 | 0.639122 |
MA0137.2 | 13.1755 |
MA0104.2 | 8.9636e-06 |
MA0047.2 | 4.44886 |
MA0112.2 | 0.133007 |
MA0065.2 | 1.3922 |
MA0150.1 | 2.60426 |
MA0151.1 | 0 |
MA0152.1 | 0.924172 |
MA0153.1 | 2.53378 |
MA0154.1 | 0.432929 |
MA0155.1 | 0.00922863 |
MA0156.1 | 0.662392 |
MA0157.1 | 1.9639 |
MA0158.1 | 0 |
MA0159.1 | 0.937909 |
MA0160.1 | 0.127092 |
MA0161.1 | 0 |
MA0162.1 | 1.29798e-13 |
MA0163.1 | 9.00931e-10 |
MA0164.1 | 0.917229 |
MA0080.2 | 0.454942 |
MA0018.2 | 0.0487986 |
MA0099.2 | 9.06118 |
MA0079.2 | 0 |
MA0102.2 | 1.67974 |
MA0258.1 | 1.4064 |
MA0259.1 | 0.0100639 |
MA0442.1 | 0 |