FFCP PHASE1:Hg19::chr2:113982348..113982371,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:113982348..113982371,-
|short_description=p@chr2:113982348..113982371,-
|description=CAGE_peak_at_chr2:113982348..113982371,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:113982348..113982371,- | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_at_chr2:113982348..113982371,- | |||
|id=chr2:113982348..113982371,- | |||
|ontology_enrichment_celltype=CL:0002149!1.55e-10!6;CL:0002255!1.55e-10!6;CL:1000497!1.40e-08!18;CL:0002518!1.40e-08!18;CL:1000507!3.69e-08!12;CL:1000494!3.69e-08!12;CL:0000239!1.59e-07!3;CL:1000615!1.59e-07!3;CL:0002306!1.59e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002149;1.32e-20;6!CL:0002255;1.32e-20;6!CL:0000159;1.02e-15;2!CL:0000313;7.45e-09;1!CL:0000319;1.42e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,1.25e-20,6;CL:0002255,1.25e-20,6;CL:0000159,1.06e-15,2;CL:0000313,8.36e-09,1;CL:0000319,1.32e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.01e-16;2!UBERON:0005795;2.46e-12;10!UBERON:0003918;4.11e-12;10!UBERON:0007687;4.11e-12;10!UBERON:0005754;3.72e-09;1!UBERON:0007123;4.06e-07;5 | |||
|ontology_enrichment_disease=DOID:120!2.05e-14!27;DOID:193!3.71e-13!29;DOID:3001!1.55e-10!6;DOID:299!2.97e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:120;4.36e-21;27!DOID:3001;1.32e-20;6!DOID:193;1.54e-19;29!DOID:299;4.59e-14;25!DOID:2152;7.45e-09;1!DOID:3030;1.42e-08;1!DOID:2394;1.54e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:120,4.75e-21,27;DOID:3001,1.25e-20,6;DOID:193,1.67e-19,29;DOID:299,4.54e-14,25;DOID:2152,8.36e-09,1;DOID:3030,1.32e-08,1;DOID:2394,1.68e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000058!1.69e-15!26;UBERON:0000489!4.03e-14!32;UBERON:0002113!1.69e-13!27;UBERON:0003918!1.69e-13!27;UBERON:0005095!1.69e-13!27;UBERON:0007687!1.69e-13!27;UBERON:0001008!3.75e-10!45;UBERON:0006554!4.25e-09!44;UBERON:0003133!5.36e-09!48;UBERON:0003887!9.29e-09!21;UBERON:0000080!1.00e-08!18;UBERON:0002120!1.00e-08!18;UBERON:0004875!1.00e-08!18;UBERON:0005721!1.00e-08!18;UBERON:0005754!1.00e-08!18;UBERON:0007297!1.00e-08!18;UBERON:0006947!1.26e-08!3;UBERON:0004054!1.26e-08!3;UBERON:0009773!3.69e-08!12;UBERON:0001231!3.69e-08!12;UBERON:0004810!3.69e-08!12;UBERON:0002394!4.63e-08!4;UBERON:0003928!4.63e-08!4;UBERON:0002046!5.21e-08!5;UBERON:0004117!5.21e-08!5;UBERON:0007689!5.21e-08!5;UBERON:0007123!5.21e-08!5;UBERON:0003091!5.21e-08!5;UBERON:0003134!5.37e-08!37;UBERON:0000474!5.37e-08!37;UBERON:0004175!6.17e-08!25;UBERON:0004876!1.14e-07!20;UBERON:0002553!1.20e-07!70;UBERON:0006853!1.59e-07!3;UBERON:0007685!1.59e-07!3;UBERON:0004134!1.59e-07!3;UBERON:0005172!1.67e-07!55;UBERON:0005173!1.67e-07!55;UBERON:0005156!1.93e-07!59;UBERON:0000990!1.93e-07!59;UBERON:0006555!3.16e-07!17;UBERON:0005103!3.16e-07!17;UBERON:0000083!3.16e-07!17;UBERON:0009201!3.16e-07!17;UBERON:0004819!3.16e-07!17;UBERON:0006553!3.16e-07!17;UBERON:0003074!3.16e-07!17;UBERON:0003060!3.16e-07!17;UBERON:0003886!4.46e-07!63;UBERON:0003100!6.48e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;8.16e-24;3!UBERON:0004054;8.16e-24;3!UBERON:0005904;5.14e-18;4!UBERON:0004175;4.16e-17;21!UBERON:0000341;1.93e-15;2!UBERON:0003134;3.79e-13;33!UBERON:0003133;1.52e-12;44!UBERON:0000474;9.78e-11;37!UBERON:0003100;1.73e-09;41!UBERON:0000992;3.47e-09;13!UBERON:0001000;3.72e-09;1!UBERON:0000998;3.72e-09;1!UBERON:0006868;3.72e-09;1!UBERON:0005352;3.72e-09;1!UBERON:0001301;5.48e-09;1!UBERON:0004911;7.45e-09;1!UBERON:0005156;9.89e-09;59!UBERON:0000990;9.89e-09;59!UBERON:0000991;1.19e-08;21!UBERON:0005795;1.42e-08;1!UBERON:0002113;1.63e-07;24!UBERON:0011143;1.63e-07;24!UBERON:0000058;1.68e-07;10!UBERON:0000995;2.29e-07;17!UBERON:0002046;4.06e-07;5!UBERON:0003975;5.81e-07;18!UBERON:0003135;7.42e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,7.29e-24,3;UBERON:0004054,7.29e-24,3;UBERON:0005904,4.73e-18,4;UBERON:0003133,5.15e-17,48;UBERON:0000341,1.43e-15,2;UBERON:0004175,2.91e-14,25;UBERON:0005156,1.73e-13,59;UBERON:0000990,1.73e-13,59;UBERON:0002113,2.91e-13,26;UBERON:0003918,2.91e-13,26;UBERON:0011143,2.91e-13,26;UBERON:0005095,2.91e-13,26;UBERON:0007687,2.91e-13,26;UBERON:0003134,8.77e-12,37;UBERON:0000474,8.77e-12,37;UBERON:0000489,5.38e-11,31;UBERON:0003100,1.58e-10,41;UBERON:0000998,3.58e-09,1;UBERON:0006868,3.58e-09,1;UBERON:0000992,3.83e-09,13;UBERON:0001000,3.87e-09,1;UBERON:0005352,3.87e-09,1;UBERON:0001301,4.89e-09,1;UBERON:0004911,8.36e-09,1;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0005795,2.11e-08,22;UBERON:0004176,3.19e-08,22;UBERON:0002046,4.00e-07,5;UBERON:0004117,4.00e-07,5;UBERON:0007689,4.00e-07,5;UBERON:0007123,4.00e-07,5;UBERON:0003091,4.00e-07,5;UBERON:0006554,5.62e-07,47;UBERON:0003135,7.21e-07,11;UBERON:0001008,8.17e-07,48 | |||
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| ||
|short_description=p@chr2:113982348..113982371,- | |||
}} | }} |
Latest revision as of 23:37, 28 July 2015
Short description: | p@chr2:113982348..113982371, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:113982348..113982371, - |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 1.25e-20 | 6 |
stromal cell of endometrium | 1.25e-20 | 6 |
seromucus secreting cell | 1.06e-15 | 2 |
serous secreting cell | 8.36e-09 | 1 |
mucus secreting cell | 1.32e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 4.75e-21 | 27 |
female reproductive endometrioid cancer | 1.25e-20 | 6 |
reproductive organ cancer | 1.67e-19 | 29 |
adenocarcinoma | 4.54e-14 | 25 |
ovary epithelial cancer | 8.36e-09 | 1 |
mucinous adenocarcinoma | 1.32e-08 | 1 |
ovarian cancer | 1.68e-08 | 14 |