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MCL coexpression mm9:45: Difference between revisions

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{{MCL_coexpression_mm9|gostat_on_MCL_coexpression=GO:0003012;muscle system process;0.000321807400017819;140781,238871,21955,21952!GO:0006936;muscle contraction;0.000321807400017819;140781,238871,21955,21952!GO:0005856;cytoskeleton;0.00252217735862418;70549,140781,68760,238871,17896,21955,21952!GO:0005861;troponin complex;0.00252217735862418;21955,21952!GO:0030017;sarcomere;0.00268491177618833;140781,21955,21952!GO:0015629;actin cytoskeleton;0.00268491177618833;140781,17896,21955,21952!GO:0044449;contractile fiber part;0.00268491177618833;140781,21955,21952!GO:0030016;myofibril;0.00289833367103597;140781,21955,21952!GO:0043292;contractile fiber;0.00289833367103597;140781,21955,21952!GO:0005200;structural constituent of cytoskeleton;0.00361264964124878;70549,21955,21952!GO:0005865;striated muscle thin filament;0.00361264964124878;21955,21952!GO:0003779;actin binding;0.00361264964124878;70549,140781,68760,21952!GO:0005515;protein binding;0.0102661953706203;15214,12289,233765,20541,12154,21955,21952,381485,76757,70549,140781,68760,16004!GO:0008092;cytoskeletal protein binding;0.0105607222569711;70549,140781,68760,21952!GO:0006937;regulation of muscle contraction;0.0124648937633188;21955,21952!GO:0043232;intracellular non-membrane-bound organelle;0.015068163523924;70549,140781,68760,238871,17896,21955,21952!GO:0043228;non-membrane-bound organelle;0.015068163523924;70549,140781,68760,238871,17896,21955,21952!GO:0006198;cAMP catabolic process;0.0183440165087018;238871!GO:0043234;protein complex;0.0195927352044433;15214,12289,140781,17896,14613,21955,21952!GO:0016459;myosin complex;0.0277924387103386;140781,17896!GO:0045746;negative regulation of Notch signaling pathway;0.0300010354269085;15214!GO:0003875;ADP-ribosylarginine hydrolase activity;0.0300010354269085;234072!GO:0044430;cytoskeletal part;0.0330659289068641;140781,17896,21955,21952!GO:0004065;arylsulfatase activity;0.0366478453099801;240725!GO:0009214;cyclic nucleotide catabolic process;0.0366478453099801;238871!GO:0008449;N-acetylglucosamine-6-sulfatase activity;0.0366478453099801;240725!GO:0005432;calcium:sodium antiporter activity;0.0366478453099801;20541!GO:0051239;regulation of multicellular organismal process;0.0388850458870231;20541,21955,21952!GO:0008593;regulation of Notch signaling pathway;0.0439533268460306;15214!GO:0007016;cytoskeletal anchoring;0.0439533268460306;70549!GO:0032991;macromolecular complex;0.0454069176481136;15214,12289,140781,17896,14613,21955,21952!GO:0015368;calcium:cation antiporter activity;0.0499196091317311;20541!GO:0055010;ventricular cardiac muscle morphogenesis;0.0499196091317311;21952!}}
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system process;0.000321807400017819;140781,238871,21955,21952!GO:0006936;muscle contraction;0.000321807400017819;140781,238871,21955,21952!GO:0005856;cytoskeleton;0.00252217735862418;70549,140781,68760,238871,17896,21955,21952!GO:0005861;troponin complex;0.00252217735862418;21955,21952!GO:0030017;sarcomere;0.00268491177618833;140781,21955,21952!GO:0015629;actin cytoskeleton;0.00268491177618833;140781,17896,21955,21952!GO:0044449;contractile fiber part;0.00268491177618833;140781,21955,21952!GO:0030016;myofibril;0.00289833367103597;140781,21955,21952!GO:0043292;contractile fiber;0.00289833367103597;140781,21955,21952!GO:0005200;structural constituent of cytoskeleton;0.00361264964124878;70549,21955,21952!GO:0005865;striated muscle thin filament;0.00361264964124878;21955,21952!GO:0003779;actin binding;0.00361264964124878;70549,140781,68760,21952!GO:0005515;protein binding;0.0102661953706203;15214,12289,233765,20541,12154,21955,21952,381485,76757,70549,140781,68760,16004!GO:0008092;cytoskeletal protein binding;0.0105607222569711;70549,140781,68760,21952!GO:0006937;regulation of muscle contraction;0.0124648937633188;21955,21952!GO:0043232;intracellular non-membrane-bound organelle;0.015068163523924;70549,140781,68760,238871,17896,21955,21952!GO:0043228;non-membrane-bound organelle;0.015068163523924;70549,140781,68760,238871,17896,21955,21952!GO:0006198;cAMP catabolic process;0.0183440165087018;238871!GO:0043234;protein complex;0.0195927352044433;15214,12289,140781,17896,14613,21955,21952!GO:0016459;myosin complex;0.0277924387103386;140781,17896!GO:0045746;negative regulation of Notch signaling pathway;0.0300010354269085;15214!GO:0003875;ADP-ribosylarginine hydrolase activity;0.0300010354269085;234072!GO:0044430;cytoskeletal part;0.0330659289068641;140781,17896,21955,21952!GO:0004065;arylsulfatase activity;0.0366478453099801;240725!GO:0009214;cyclic nucleotide catabolic process;0.0366478453099801;238871!GO:0008449;N-acetylglucosamine-6-sulfatase activity;0.0366478453099801;240725!GO:0005432;calcium:sodium antiporter activity;0.0366478453099801;20541!GO:0051239;regulation of multicellular organismal process;0.0388850458870231;20541,21955,21952!GO:0008593;regulation of Notch signaling pathway;0.0439533268460306;15214!GO:0007016;cytoskeletal anchoring;0.0439533268460306;70549!GO:0032991;macromolecular complex;0.0454069176481136;15214,12289,140781,17896,14613,21955,21952!GO:0015368;calcium:cation antiporter activity;0.0499196091317311;20541!GO:0055010;ventricular cardiac muscle morphogenesis;0.0499196091317311;21952!|ontology_enrichment_celltype=|ontology_enrichment_disease=|ontology_enrichment_uberon=UBERON:0007100!2.94e-14!18;UBERON:0000948!2.94e-14!18;UBERON:0005498!2.94e-14!18;UBERON:0004140!2.94e-14!18;UBERON:0009881!2.94e-14!18;UBERON:0004141!2.94e-14!18;UBERON:0003084!2.94e-14!18;UBERON:0007005!2.94e-14!18;UBERON:0004139!2.94e-14!18;UBERON:0004291!2.94e-14!18;UBERON:0004535!5.60e-10!23;UBERON:0001009!5.60e-10!23;UBERON:0000026!8.44e-07!12;UBERON:0004708!8.44e-07!12;UBERON:0002101!8.44e-07!12;UBERON:0004357!8.44e-07!12;UBERON:0004347!8.44e-07!12;UBERON:0005732!8.44e-07!12;UBERON:0005733!8.44e-07!12|tfbs_overrepresentation_for_novel_motifs=1.31019e-05,0.000351825,3.44671e-06,0.0309929,0.0492163,0.000472542,0.000216532,1.9464e-05,0.0119303,0.620035,9.01814e-06,0.693025,0.000171156,8.78488e-06,5.79833e-06,0,0.0171721,0.000610081,0.027942,0.000636741,0.143805,1.43194e-05,6.21194e-05,0.00305722,0.000535978,0.000666477,0.0178968,0.00095477,9.61522e-05,4.94139e-05,0.00390679,1.55517,20.2418,0.000850473,5.42342e-09,688.021,1.87449e-10,0.000522971,4.88281e-06,113.518,0.0128067,0.000229146,0.188431,2.46639,0,0.000537682,0.00122176,6.0675e-06,6.01981,0.00486861,0.000838828,0.000304592,5.74065e-06,0.00510173,0.373812,7.98386e-05,0.0038038,0.000396245,0.00477792,7.4971e-05,0.017355,0.00515384,0.00996511,0.000671013,0.000520849,0.00144582,0.0908085,0.130978,0.0450356,0.0702472,1.82954e-05,0.0064664,4.82164e-17,0.446108,8.28299e-12,4.34912e-07,4.61087e-05,0.0255381,0.00341664,8.4528e-05,4.83462,0.0001815,0.0549154,4.8596e-05,0.00238293,0,0.000640501,39.4999,0.000247234,0.220359,0.0334685,0.0158416,0.00693203,3.91096,2.07596e-09,37.1074,2.54997,0.00719138,0.00459282,9.32295,5.01611,1.2464,0.0242631,0.322956,0.12779,1.25554e-08,0.000289327,0.328294,6.99808e-07,1.26263e-08,3.33239,0.0758373,3.03918e-05,0.000254356,0.326956,0.000153994,1.71585e-11,2.46627e-05,0.00553981,4.87794e-05,0.458347,0.0211444,0.0591491,0.0105262,0.0483729,0.0146031,9.75589,0.0237506,0.0203716,7.04045e-05,0.0205402,0.000618994,0.0744214,16.4659,0.0400106,27.0885,2.37523,2.21384,0.0292418,0.489,0.201119,1.89511,0.0394449,0.024992,0.0119102,33.4249,0.0137499,0.45677,0.000673938,1.99102e-06,0.00241568,0,2.22193,6.81342,0.00541967,0.0115775,0.0252409,0.00384759,4.37027e-05,8.09663e-07,0.0311535,0.049329,0.00363763,8.28264e-06,0.115034,0.186851,4.18778,0.0405324,9.07914e-14|tfbs_overrepresentation_jaspar=MA0003.1;0,MA0004.1;4.32613e-06,MA0006.1;5.53698e-10,MA0007.1;0.000159246,MA0009.1;4.33268,MA0014.1;0,MA0017.1;0.000387999,MA0019.1;0.043764,MA0024.1;0.0045828,MA0025.1;0.0155871,MA0027.1;0.933389,MA0028.1;4.4712e-08,MA0029.1;8.80855,MA0030.1;0.00366833,MA0031.1;0.026891,MA0038.1;0.00229461,MA0040.1;0.0340985,MA0041.1;0.00010447,MA0042.1;4.69651e-06,MA0043.1;0.00415428,MA0046.1;0.0431672,MA0048.1;1.98367e-06,MA0050.1;0.107578,MA0051.1;4.11987,MA0052.1;0.309867,MA0055.1;0.0184859,MA0056.1;0,MA0057.1;10.6762,MA0058.1;1.41741e-07,MA0059.1;0.000202927,MA0060.1;8.85735e-14,MA0061.1;0.000390241,MA0063.1;0,MA0066.1;0.131255,MA0067.1;0.034726,MA0068.1;5.41542e-06,MA0069.1;0.010677,MA0070.1;0.00949899,MA0071.1;0.000347064,MA0072.1;0.00855293,MA0073.1;0,MA0074.1;0.000671596,MA0076.1;8.11595e-06,MA0077.1;0.00646306,MA0078.1;0.167053,MA0081.1;54.9918,MA0083.1;1.67375,MA0084.1;0.158237,MA0087.1;0.0506661,MA0088.1;0.000274758,MA0089.1;0,MA0090.1;0.305171,MA0091.1;0.0672375,MA0092.1;0.0594985,MA0093.1;8.45811e-08,MA0095.1;0,MA0098.1;0,MA0100.1;0.000477907,MA0101.1;0.00170384,MA0103.1;0.0366496,MA0105.1;0.000104274,MA0106.1;0.00218591,MA0107.1;0.000214073,MA0108.2;0.952842,MA0109.1;0,MA0111.1;0.00530889,MA0113.1;0.198073,MA0114.1;0.00374488,MA0115.1;0.0758447,MA0116.1;3.40024e-05,MA0117.1;0.00293018,MA0119.1;1.32418,MA0122.1;0.0684888,MA0124.1;0.0242618,MA0125.1;0.0136181,MA0130.1;0,MA0131.1;0.000352873,MA0132.1;0,MA0133.1;0,MA0135.1;0.00617896,MA0136.1;5.30988,MA0139.1;4.57625e-08,MA0140.1;2.90102,MA0141.1;0.00608616,MA0142.1;0.00727866,MA0143.1;0.00531132,MA0144.1;6.75892e-06,MA0145.1;6.92433e-10,MA0146.1;0,MA0147.1;6.61937e-06,MA0148.1;0.107706,MA0149.1;7.68308,MA0062.2;0.000541728,MA0035.2;11.5109,MA0039.2;0,MA0138.2;0.202276,MA0002.2;0.0146182,MA0137.2;2.15371e-07,MA0104.2;1.03362e-07,MA0047.2;0.000651867,MA0112.2;0.058404,MA0065.2;4.41233,MA0150.1;0.000472879,MA0151.1;0,MA0152.1;1.27384,MA0153.1;0.0386318,MA0154.1;0.000354361,MA0155.1;1.44166e-06,MA0156.1;1.09648,MA0157.1;0.0736879,MA0158.1;0,MA0159.1;0.106302,MA0160.1;0.0157404,MA0161.1;0,MA0162.1;0,MA0163.1;1.49775e-05,MA0164.1;0.00348339,MA0080.2;7.25485,MA0018.2;0.0107189,MA0099.2;2.36163e-05,MA0079.2;4.24974,MA0102.2;0.187124,MA0258.1;0.339578,MA0259.1;1.16573e-09,MA0442.1;0}}

Latest revision as of 14:34, 17 September 2013


Phase1 CAGE Peaks

 Short description
Mm9::chr10:30562571..30562597,-p1@Hey2
Mm9::chr10:30562617..30562637,-p2@Hey2
Mm9::chr10:30562939..30562969,-p5@Hey2
Mm9::chr10:32803009..32803020,+p5@Trdn
Mm9::chr10:45055692..45055703,+p@chr10:45055692..45055703
+
Mm9::chr10:45055711..45055733,+p@chr10:45055711..45055733
+
Mm9::chr11:104438681..104438701,+p1@Myl4
Mm9::chr11:11857051..11857089,-p@chr11:11857051..11857089
-
Mm9::chr11:12209735..12209749,-p@chr11:12209735..12209749
-
Mm9::chr11:12209763..12209774,-p@chr11:12209763..12209774
-
Mm9::chr11:5796667..5796694,-p@chr11:5796667..5796694
-
Mm9::chr11:5798013..5798046,-p@chr11:5798013..5798046
-
Mm9::chr11:82724285..82724305,-p@chr11:82724285..82724305
-
Mm9::chr12:118981234..118981244,+p@chr12:118981234..118981244
+
Mm9::chr12:70859634..70859660,-p@chr12:70859634..70859660
-
Mm9::chr13:110422754..110422758,+p23@Pde4d
Mm9::chr13:110422956..110422986,+p13@Pde4d
Mm9::chr13:114453819..114453842,-p1@Hspb3
Mm9::chr13:114453859..114453870,-p5@Hspb3
Mm9::chr13:46513581..46513607,+p3@Rbm24
Mm9::chr13:46515899..46515910,+p@chr13:46515899..46515910
+
Mm9::chr14:21480093..21480110,-p@chr14:21480093..21480110
-
Mm9::chr14:21482909..21482918,-p@chr14:21482909..21482918
-
Mm9::chr14:21483702..21483773,-p1@Synpo2l
Mm9::chr14:21483784..21483802,-p3@Synpo2l
Mm9::chr14:31304637..31304644,-p4@Cacna1d
Mm9::chr14:31304674..31304692,-p6@Cacna1d
Mm9::chr14:55593184..55593190,-p@chr14:55593184..55593190
-
Mm9::chr14:55602170..55602199,+p@chr14:55602170..55602199
+
Mm9::chr14:55602203..55602213,+p@chr14:55602203..55602213
+
Mm9::chr14:55607146..55607181,+p@chr14:55607146..55607181
+
Mm9::chr14:55611043..55611057,-p@chr14:55611043..55611057
-
Mm9::chr14:55611264..55611275,-p@chr14:55611264..55611275
-
Mm9::chr14:55611535..55611548,-p@chr14:55611535..55611548
-
Mm9::chr14:55611560..55611577,-p@chr14:55611560..55611577
-
Mm9::chr14:55611633..55611644,-p@chr14:55611633..55611644
-
Mm9::chr14:55611670..55611684,-p@chr14:55611670..55611684
-
Mm9::chr14:55613378..55613394,-p1@Myh7
Mm9::chr15:103250980..103250989,-p@chr15:103250980..103250989
-
Mm9::chr16:38713467..38713476,-p16@Arhgap31
Mm9::chr16:38713504..38713520,-p11@Arhgap31
Mm9::chr16:94943487..94943507,+p@chr16:94943487..94943507
+
Mm9::chr16:94943562..94943575,+p@chr16:94943562..94943575
+
Mm9::chr16:94943587..94943598,+p@chr16:94943587..94943598
+
Mm9::chr16:94953732..94953734,+p@chr16:94953732..94953734
+
Mm9::chr16:96422202..96422215,+p4@Sh3bgr
Mm9::chr17:12962471..12962566,-p1@Igf2r
Mm9::chr17:81864975..81864978,-p@chr17:81864975..81864978
-
Mm9::chr17:82019802..82019806,-p@chr17:82019802..82019806
-
Mm9::chr17:82024490..82024493,-p@chr17:82024490..82024493
-
Mm9::chr17:82027075..82027096,-p@chr17:82027075..82027096
-
Mm9::chr17:82027237..82027265,-p@chr17:82027237..82027265
-
Mm9::chr17:82130326..82130335,-p@chr17:82130326..82130335
-
Mm9::chr17:82130589..82130601,-p@chr17:82130589..82130601
-
Mm9::chr17:82137695..82137706,-p2@Slc8a1
Mm9::chr17:82137711..82137740,-p1@Slc8a1
Mm9::chr18:58368787..58368802,-p@chr18:58368787..58368802
-
Mm9::chr18:61812073..61812094,-p@chr18:61812073..61812094
-
Mm9::chr19:36193739..36193752,-p@chr19:36193739..36193752
-
Mm9::chr19:36193772..36193793,-p@chr19:36193772..36193793
-
Mm9::chr19:36194203..36194213,-p@chr19:36194203..36194213
-
Mm9::chr1:12682650..12682666,+p4@Sulf1
Mm9::chr1:137696010..137696057,+p1@Tnni1
Mm9::chr1:137696539..137696546,+p2@Tnni1
Mm9::chr1:137697405..137697416,+p@chr1:137697405..137697416
+
Mm9::chr1:137740383..137740400,-p@chr1:137740383..137740400
-
Mm9::chr1:168051272..168051276,-p@chr1:168051272..168051276
-
Mm9::chr2:113873121..113873178,-p@chr2:113873121..113873178
-
Mm9::chr2:31934859..31934870,-p11@Fam78a
Mm9::chr3:100914670..100914705,-p5@Ptgfrn
Mm9::chr3:133863106..133863116,+p3@uc008rku.1
Mm9::chr3:19544452..19544466,+p1@Trim55
Mm9::chr3:19544467..19544474,+p4@Trim55
Mm9::chr3:19544517..19544529,+p2@Trim55
Mm9::chr3:19589811..19589823,+p@chr3:19589811..19589823
+
Mm9::chr3:19590017..19590020,+p@chr3:19590017..19590020
+
Mm9::chr3:19592015..19592026,+p@chr3:19592015..19592026
+
Mm9::chr3:19607417..19607418,+p@chr3:19607417..19607418
+
Mm9::chr3:96836317..96836331,+p1@Gja5
Mm9::chr3:96836346..96836355,+p3@Gja5
Mm9::chr3:96836360..96836371,+p2@Gja5
Mm9::chr4:147376074..147376116,+p@chr4:147376074..147376116
+
Mm9::chr4:20794034..20794039,-p@chr4:20794034..20794039
-
Mm9::chr5:149076477..149076494,+p9@Mtus2
Mm9::chr5:77287591..77287607,-p@chr5:77287591..77287607
-
Mm9::chr5:77287749..77287763,+p6@C530008M17Rik
Mm9::chr5:77287765..77287777,+p10@C530008M17Rik
Mm9::chr6:87379070..87379081,+p@chr6:87379070..87379081
+
Mm9::chr6:99154432..99154453,+p@chr6:99154432..99154453
+
Mm9::chr7:107964664..107964683,+p@chr7:107964664..107964683
+
Mm9::chr7:123381157..123381175,-p6@Plekha7
Mm9::chr7:123381281..123381295,-p5@Plekha7
Mm9::chr7:4466211..4466234,-p3@Tnnt1
Mm9::chr7:51728901..51728919,+p@chr7:51728901..51728919
+
Mm9::chr7:51728925..51728938,+p@chr7:51728925..51728938
+
Mm9::chr7:51728959..51728973,+p@chr7:51728959..51728973
+
Mm9::chr7:51729003..51729012,+p@chr7:51729003..51729012
+
Mm9::chr7:51729113..51729243,+p@chr7:51729113..51729243
+
Mm9::chr7:51729271..51729306,+p@chr7:51729271..51729306
+
Mm9::chr7:51729314..51729339,+p@chr7:51729314..51729339
+
Mm9::chr7:51729345..51729362,+p@chr7:51729345..51729362
+
Mm9::chr7:51729379..51729387,-p@chr7:51729379..51729387
-
Mm9::chr7:51729381..51729389,+p@chr7:51729381..51729389
+
Mm9::chr7:51729401..51729415,+p@chr7:51729401..51729415
+
Mm9::chr7:51729450..51729465,+p@chr7:51729450..51729465
+
Mm9::chr7:51729974..51729985,+p@chr7:51729974..51729985
+
Mm9::chr7:51730048..51730064,+p@chr7:51730048..51730064
+
Mm9::chr7:51730133..51730146,+p@chr7:51730133..51730146
+
Mm9::chr7:51730628..51730629,+p@chr7:51730628..51730629
+
Mm9::chr7:51730637..51730638,+p@chr7:51730637..51730638
+
Mm9::chr7:51730841..51730855,+p@chr7:51730841..51730855
+
Mm9::chr7:51730882..51730894,+p@chr7:51730882..51730894
+
Mm9::chr7:51730898..51730909,+p@chr7:51730898..51730909
+
Mm9::chr7:51730969..51730981,+p@chr7:51730969..51730981
+
Mm9::chr7:51731062..51731073,+p@chr7:51731062..51731073
+
Mm9::chr7:51731122..51731154,-p@chr7:51731122..51731154
-
Mm9::chr7:51731123..51731124,+p@chr7:51731123..51731124
+
Mm9::chr7:51731128..51731157,+p@chr7:51731128..51731157
+
Mm9::chr7:51731280..51731302,+p@chr7:51731280..51731302
+
Mm9::chr7:51731322..51731333,+p@chr7:51731322..51731333
+
Mm9::chr7:51731338..51731343,+p@chr7:51731338..51731343
+
Mm9::chr7:51731355..51731366,+p@chr7:51731355..51731366
+
Mm9::chr7:51731381..51731384,+p@chr7:51731381..51731384
+
Mm9::chr7:51731394..51731399,+p@chr7:51731394..51731399
+
Mm9::chr7:51731410..51731421,+p@chr7:51731410..51731421
+
Mm9::chr7:51731472..51731477,+p@chr7:51731472..51731477
+
Mm9::chr7:51731484..51731501,+p@chr7:51731484..51731501
+
Mm9::chr7:51731503..51731514,+p@chr7:51731503..51731514
+
Mm9::chr7:51731523..51731534,+p@chr7:51731523..51731534
+
Mm9::chr7:51731537..51731548,+p@chr7:51731537..51731548
+
Mm9::chr7:51731574..51731579,+p@chr7:51731574..51731579
+
Mm9::chr7:51731595..51731612,+p@chr7:51731595..51731612
+
Mm9::chr7:51731633..51731652,+p@chr7:51731633..51731652
+
Mm9::chr7:51731666..51731695,+p@chr7:51731666..51731695
+
Mm9::chr7:51731703..51731710,+p@chr7:51731703..51731710
+
Mm9::chr7:51731732..51731742,+p@chr7:51731732..51731742
+
Mm9::chr7:51731790..51731819,+p@chr7:51731790..51731819
+
Mm9::chr7:51731862..51731891,+p@chr7:51731862..51731891
+
Mm9::chr7:51731920..51731945,+p@chr7:51731920..51731945
+
Mm9::chr7:51731976..51731987,+p@chr7:51731976..51731987
+
Mm9::chr7:51731995..51732021,+p@chr7:51731995..51732021
+
Mm9::chr7:51732037..51732040,+p@chr7:51732037..51732040
+
Mm9::chr7:51732065..51732093,+p@chr7:51732065..51732093
+
Mm9::chr7:51732120..51732160,+p@chr7:51732120..51732160
+
Mm9::chr7:51732161..51732183,+p@chr7:51732161..51732183
+
Mm9::chr7:51732188..51732203,+p@chr7:51732188..51732203
+
Mm9::chr7:51732207..51732216,+p@chr7:51732207..51732216
+
Mm9::chr7:51732246..51732257,+p@chr7:51732246..51732257
+
Mm9::chr7:51732259..51732260,+p@chr7:51732259..51732260
+
Mm9::chr7:51732264..51732273,+p@chr7:51732264..51732273
+
Mm9::chr7:51732283..51732293,+p@chr7:51732283..51732293
+
Mm9::chr7:51732302..51732328,+p@chr7:51732302..51732328
+
Mm9::chr7:51732329..51732340,+p@chr7:51732329..51732340
+
Mm9::chr7:51732345..51732362,+p@chr7:51732345..51732362
+
Mm9::chr7:51732373..51732392,+p@chr7:51732373..51732392
+
Mm9::chr7:51732398..51732412,+p@chr7:51732398..51732412
+
Mm9::chr7:51732428..51732439,+p@chr7:51732428..51732439
+
Mm9::chr7:51732449..51732460,+p@chr7:51732449..51732460
+
Mm9::chr7:51732472..51732479,+p@chr7:51732472..51732479
+
Mm9::chr7:51732512..51732530,+p@chr7:51732512..51732530
+
Mm9::chr7:51732582..51732611,+p@chr7:51732582..51732611
+
Mm9::chr7:51732612..51732623,+p@chr7:51732612..51732623
+
Mm9::chr7:51732647..51732703,+p@chr7:51732647..51732703
+
Mm9::chr7:51732706..51732717,+p@chr7:51732706..51732717
+
Mm9::chr7:51732761..51732768,+p@chr7:51732761..51732768
+
Mm9::chr7:51732809..51732830,+p@chr7:51732809..51732830
+
Mm9::chr7:51732845..51732853,-p@chr7:51732845..51732853
-
Mm9::chr7:51732847..51732858,+p@chr7:51732847..51732858
+
Mm9::chr7:51732894..51732905,+p@chr7:51732894..51732905
+
Mm9::chr7:51732924..51732946,+p@chr7:51732924..51732946
+
Mm9::chr7:51732948..51732969,+p@chr7:51732948..51732969
+
Mm9::chr7:51732979..51732988,+p@chr7:51732979..51732988
+
Mm9::chr7:51732989..51733013,+p@chr7:51732989..51733013
+
Mm9::chr7:51733023..51733044,+p@chr7:51733023..51733044
+
Mm9::chr7:51733046..51733072,+p@chr7:51733046..51733072
+
Mm9::chr7:51733076..51733120,+p@chr7:51733076..51733120
+
Mm9::chr7:51733136..51733147,+p@chr7:51733136..51733147
+
Mm9::chr7:51733164..51733196,+p@chr7:51733164..51733196
+
Mm9::chr7:51733200..51733207,+p@chr7:51733200..51733207
+
Mm9::chr7:51733230..51733250,+p@chr7:51733230..51733250
+
Mm9::chr7:51733259..51733286,+p@chr7:51733259..51733286
+
Mm9::chr7:51733375..51733393,+p@chr7:51733375..51733393
+
Mm9::chr7:51733401..51733414,+p@chr7:51733401..51733414
+
Mm9::chr7:51733418..51733421,+p@chr7:51733418..51733421
+
Mm9::chr7:51733424..51733433,+p@chr7:51733424..51733433
+
Mm9::chr7:51733434..51733457,+p@chr7:51733434..51733457
+
Mm9::chr7:51733463..51733500,+p@chr7:51733463..51733500
+
Mm9::chr7:51733506..51733517,+p@chr7:51733506..51733517
+
Mm9::chr7:51733534..51733554,+p@chr7:51733534..51733554
+
Mm9::chr7:51733563..51733570,+p@chr7:51733563..51733570
+
Mm9::chr7:51733583..51733606,+p@chr7:51733583..51733606
+
Mm9::chr7:51733634..51733641,+p@chr7:51733634..51733641
+
Mm9::chr7:51733652..51733673,+p@chr7:51733652..51733673
+
Mm9::chr7:51733718..51733725,+p@chr7:51733718..51733725
+
Mm9::chr7:51733730..51733743,+p@chr7:51733730..51733743
+
Mm9::chr7:51733745..51733748,+p@chr7:51733745..51733748
+
Mm9::chr7:51733753..51733768,+p@chr7:51733753..51733768
+
Mm9::chr7:51733782..51733788,+p@chr7:51733782..51733788
+
Mm9::chr7:51733790..51733808,+p@chr7:51733790..51733808
+
Mm9::chr7:51733799..51733811,-p@chr7:51733799..51733811
-
Mm9::chr7:51733822..51733852,+p@chr7:51733822..51733852
+
Mm9::chr7:51733869..51733897,+p@chr7:51733869..51733897
+
Mm9::chr7:51733908..51733919,+p@chr7:51733908..51733919
+
Mm9::chr7:51733939..51733959,+p@chr7:51733939..51733959
+
Mm9::chr7:51733965..51733976,+p@chr7:51733965..51733976
+
Mm9::chr7:51733979..51733990,+p@chr7:51733979..51733990
+
Mm9::chr7:51733996..51734002,+p@chr7:51733996..51734002
+
Mm9::chr7:51734048..51734055,+p@chr7:51734048..51734055
+
Mm9::chr7:51734066..51734091,+p@chr7:51734066..51734091
+
Mm9::chr7:51734102..51734116,+p@chr7:51734102..51734116
+
Mm9::chr7:51734150..51734198,+p@chr7:51734150..51734198
+
Mm9::chr7:51734211..51734236,+p@chr7:51734211..51734236
+
Mm9::chr7:51734240..51734262,+p@chr7:51734240..51734262
+
Mm9::chr7:51734278..51734294,+p@chr7:51734278..51734294
+
Mm9::chr7:51734296..51734316,+p@chr7:51734296..51734316
+
Mm9::chr7:51734300..51734321,-p@chr7:51734300..51734321
-
Mm9::chr7:51734317..51734340,+p@chr7:51734317..51734340
+
Mm9::chr7:51734735..51734776,+p@chr7:51734735..51734776
+
Mm9::chr7:51734778..51734800,+p@chr7:51734778..51734800
+
Mm9::chr7:51734803..51734855,+p@chr7:51734803..51734855
+
Mm9::chr7:51734872..51734875,+p@chr7:51734872..51734875
+
Mm9::chr7:51734879..51734898,+p@chr7:51734879..51734898
+
Mm9::chr7:51734903..51734914,+p@chr7:51734903..51734914
+
Mm9::chr7:51734917..51734955,+p@chr7:51734917..51734955
+
Mm9::chr7:51734958..51734964,+p@chr7:51734958..51734964
+
Mm9::chr7:51734966..51734969,+p@chr7:51734966..51734969
+
Mm9::chr7:51734976..51735008,+p@chr7:51734976..51735008
+
Mm9::chr7:51735010..51735062,+p@chr7:51735010..51735062
+
Mm9::chr7:51735067..51735111,+p@chr7:51735067..51735111
+
Mm9::chr7:51735120..51735128,+p@chr7:51735120..51735128
+
Mm9::chr7:51735141..51735178,+p@chr7:51735141..51735178
+
Mm9::chr7:51735163..51735178,-p@chr7:51735163..51735178
-
Mm9::chr7:51735179..51735247,+p@chr7:51735179..51735247
+
Mm9::chr7:51735256..51735270,+p@chr7:51735256..51735270
+
Mm9::chr7:51735272..51735289,+p@chr7:51735272..51735289
+
Mm9::chr7:51735293..51735299,+p@chr7:51735293..51735299
+
Mm9::chr7:51735301..51735317,+p@chr7:51735301..51735317
+
Mm9::chr7:51735321..51735324,+p@chr7:51735321..51735324
+
Mm9::chr7:51735380..51735389,+p@chr7:51735380..51735389
+
Mm9::chr7:51735392..51735405,+p@chr7:51735392..51735405
+
Mm9::chr7:51735437..51735446,+p@chr7:51735437..51735446
+
Mm9::chr7:51735460..51735474,+p@chr7:51735460..51735474
+
Mm9::chr7:51735487..51735498,+p@chr7:51735487..51735498
+
Mm9::chr7:51735505..51735522,+p@chr7:51735505..51735522
+
Mm9::chr7:51735525..51735538,+p@chr7:51735525..51735538
+
Mm9::chr7:51735549..51735558,-p@chr7:51735549..51735558
-
Mm9::chr7:51735571..51735576,+p@chr7:51735571..51735576
+
Mm9::chr7:51735600..51735629,+p@chr7:51735600..51735629
+
Mm9::chr7:51735630..51735670,+p@chr7:51735630..51735670
+
Mm9::chr7:51735671..51735680,+p@chr7:51735671..51735680
+
Mm9::chr7:51735685..51735700,+p@chr7:51735685..51735700
+
Mm9::chr7:51735701..51735718,+p@chr7:51735701..51735718
+
Mm9::chr7:51735740..51735757,+p@chr7:51735740..51735757
+
Mm9::chr7:51735759..51735770,+p@chr7:51735759..51735770
+
Mm9::chr7:51735773..51735784,+p@chr7:51735773..51735784
+
Mm9::chr7:51735794..51735817,+p@chr7:51735794..51735817
+
Mm9::chr7:51735842..51735852,+p@chr7:51735842..51735852
+
Mm9::chr7:51735854..51735858,+p@chr7:51735854..51735858
+
Mm9::chr7:51735863..51735869,+p@chr7:51735863..51735869
+
Mm9::chr7:51735872..51735883,+p@chr7:51735872..51735883
+
Mm9::chr7:51735890..51735899,+p@chr7:51735890..51735899
+
Mm9::chr7:51735946..51735983,+p@chr7:51735946..51735983
+
Mm9::chr7:51735997..51736015,+p@chr7:51735997..51736015
+
Mm9::chr7:51736042..51736082,+p@chr7:51736042..51736082
+
Mm9::chr7:51736087..51736131,+p@chr7:51736087..51736131
+
Mm9::chr7:51736145..51736158,-p@chr7:51736145..51736158
-
Mm9::chr7:51736149..51736160,+p@chr7:51736149..51736160
+
Mm9::chr7:51736181..51736186,+p@chr7:51736181..51736186
+
Mm9::chr7:51736326..51736343,+p@chr7:51736326..51736343
+
Mm9::chr7:51736359..51736380,+p@chr7:51736359..51736380
+
Mm9::chr7:51736415..51736452,+p@chr7:51736415..51736452
+
Mm9::chr7:51736453..51736470,+p@chr7:51736453..51736470
+
Mm9::chr7:51736494..51736515,+p@chr7:51736494..51736515
+
Mm9::chr7:51736518..51736544,+p@chr7:51736518..51736544
+
Mm9::chr7:51736546..51736549,+p@chr7:51736546..51736549
+
Mm9::chr7:51736554..51736573,+p@chr7:51736554..51736573
+
Mm9::chr7:51736590..51736663,+p@chr7:51736590..51736663
+
Mm9::chr7:51736664..51736675,+p@chr7:51736664..51736675
+
Mm9::chr7:51736678..51736690,+p@chr7:51736678..51736690
+
Mm9::chr7:51736705..51736721,+p@chr7:51736705..51736721
+
Mm9::chr7:51736722..51736733,+p@chr7:51736722..51736733
+
Mm9::chr7:51736736..51736741,+p@chr7:51736736..51736741
+
Mm9::chr7:51736748..51736757,+p@chr7:51736748..51736757
+
Mm9::chr7:51736774..51736784,+p@chr7:51736774..51736784
+
Mm9::chr7:51736786..51736793,+p@chr7:51736786..51736793
+
Mm9::chr7:51736812..51736817,+p@chr7:51736812..51736817
+
Mm9::chr7:51736844..51736855,+p@chr7:51736844..51736855
+
Mm9::chr7:51736861..51736887,+p@chr7:51736861..51736887
+
Mm9::chr7:51736894..51736911,+p@chr7:51736894..51736911
+
Mm9::chr7:51736914..51736925,+p@chr7:51736914..51736925
+
Mm9::chr7:51736934..51736950,+p@chr7:51736934..51736950
+
Mm9::chr7:51736962..51736974,+p@chr7:51736962..51736974
+
Mm9::chr7:51736984..51737011,+p@chr7:51736984..51737011
+
Mm9::chr7:51737018..51737029,+p@chr7:51737018..51737029
+
Mm9::chr7:51737060..51737071,+p@chr7:51737060..51737071
+
Mm9::chr7:51737485..51737523,+p@chr7:51737485..51737523
+
Mm9::chr7:51737648..51737659,+p@chr7:51737648..51737659
+
Mm9::chr7:51737938..51737966,+p@chr7:51737938..51737966
+
Mm9::chr7:51737996..51738003,+p@chr7:51737996..51738003
+
Mm9::chr7:51738007..51738017,+p@chr7:51738007..51738017
+
Mm9::chr7:51738020..51738053,+p@chr7:51738020..51738053
+
Mm9::chr7:51738059..51738068,+p@chr7:51738059..51738068
+
Mm9::chr7:51738081..51738090,+p@chr7:51738081..51738090
+
Mm9::chr7:51738093..51738110,+p@chr7:51738093..51738110
+
Mm9::chr7:51738126..51738143,+p@chr7:51738126..51738143
+
Mm9::chr7:51738145..51738159,+p@chr7:51738145..51738159
+
Mm9::chr7:51738169..51738194,+p@chr7:51738169..51738194
+
Mm9::chr7:51738279..51738292,+p@chr7:51738279..51738292
+
Mm9::chr7:51738377..51738388,+p@chr7:51738377..51738388
+
Mm9::chr7:51740259..51740267,+p@chr7:51740259..51740267
+
Mm9::chr8:107133241..107133262,-p@chr8:107133241..107133262
-
Mm9::chr8:107133264..107133275,-p@chr8:107133264..107133275
-
Mm9::chr8:13254176..13254188,-p6@Adprhl1
Mm9::chr8:13254246..13254269,-p7@Adprhl1
Mm9::chr8:46743653..46743662,+p24@Sorbs2
Mm9::chr8:46743663..46743677,+p11@Sorbs2
Mm9::chr8:46743678..46743692,+p9@Sorbs2
Mm9::chr8:59966863..59966894,+p1@ENSMUST00000139440
p1@uc009lsv.1
Mm9::chr8:73796212..73796220,-p6@Haus8
Mm9::chr9:24529233..24529237,-p@chr9:24529233..24529237
-
Mm9::chr9:24569888..24569893,-p@chr9:24569888..24569893
-
Mm9::chr9:58670655..58670669,+p@chr9:58670655..58670669
+
Mm9::chr9:67276625..67276674,-p2@Tln2
Mm9::chrX:111588178..111588202,+p2@Klhl4
Mm9::chrX:111588243..111588264,+p5@Klhl4
Mm9::chrX:45753702..45753718,+p@chrX:45753702..45753718
+


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0003012muscle system process0.000321807400017819
GO:0006936muscle contraction0.000321807400017819
GO:0005856cytoskeleton0.00252217735862418
GO:0005861troponin complex0.00252217735862418
GO:0030017sarcomere0.00268491177618833
GO:0015629actin cytoskeleton0.00268491177618833
GO:0044449contractile fiber part0.00268491177618833
GO:0030016myofibril0.00289833367103597
GO:0043292contractile fiber0.00289833367103597
GO:0005200structural constituent of cytoskeleton0.00361264964124878
GO:0005865striated muscle thin filament0.00361264964124878
GO:0003779actin binding0.00361264964124878
GO:0005515protein binding0.0102661953706203
GO:0008092cytoskeletal protein binding0.0105607222569711
GO:0006937regulation of muscle contraction0.0124648937633188
GO:0043232intracellular non-membrane-bound organelle0.015068163523924
GO:0043228non-membrane-bound organelle0.015068163523924
GO:0006198cAMP catabolic process0.0183440165087018
GO:0043234protein complex0.0195927352044433
GO:0016459myosin complex0.0277924387103386
GO:0045746negative regulation of Notch signaling pathway0.0300010354269085
GO:0003875ADP-ribosylarginine hydrolase activity0.0300010354269085
GO:0044430cytoskeletal part0.0330659289068641
GO:0004065arylsulfatase activity0.0366478453099801
GO:0009214cyclic nucleotide catabolic process0.0366478453099801
GO:0008449N-acetylglucosamine-6-sulfatase activity0.0366478453099801
GO:0005432calcium:sodium antiporter activity0.0366478453099801
GO:0051239regulation of multicellular organismal process0.0388850458870231
GO:0008593regulation of Notch signaling pathway0.0439533268460306
GO:0007016cytoskeletal anchoring0.0439533268460306
GO:0032991macromolecular complex0.0454069176481136
GO:0015368calcium:cation antiporter activity0.0499196091317311
GO:0055010ventricular cardiac muscle morphogenesis0.0499196091317311



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>

Uber Anatomy
Ontology termp-valuen
primary circulatory organ2.94e-1418
heart2.94e-1418
primitive heart tube2.94e-1418
primary heart field2.94e-1418
anterior lateral plate mesoderm2.94e-1418
heart tube2.94e-1418
heart primordium2.94e-1418
cardiac mesoderm2.94e-1418
cardiogenic plate2.94e-1418
heart rudiment2.94e-1418
cardiovascular system5.60e-1023
circulatory system5.60e-1023
appendage8.44e-0712
paired limb/fin8.44e-0712
limb8.44e-0712
paired limb/fin bud8.44e-0712
limb bud8.44e-0712
limb/fin field8.44e-0712
limb field8.44e-0712


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)
MA0003.10
MA0004.14.32613e-06
MA0006.15.53698e-10
MA0007.10.000159246
MA0009.14.33268
MA0014.10
MA0017.10.000387999
MA0019.10.043764
MA0024.10.0045828
MA0025.10.0155871
MA0027.10.933389
MA0028.14.4712e-08
MA0029.18.80855
MA0030.10.00366833
MA0031.10.026891
MA0038.10.00229461
MA0040.10.0340985
MA0041.10.00010447
MA0042.14.69651e-06
MA0043.10.00415428
MA0046.10.0431672
MA0048.11.98367e-06
MA0050.10.107578
MA0051.14.11987
MA0052.10.309867
MA0055.10.0184859
MA0056.10
MA0057.110.6762
MA0058.11.41741e-07
MA0059.10.000202927
MA0060.18.85735e-14
MA0061.10.000390241
MA0063.10
MA0066.10.131255
MA0067.10.034726
MA0068.15.41542e-06
MA0069.10.010677
MA0070.10.00949899
MA0071.10.000347064
MA0072.10.00855293
MA0073.10
MA0074.10.000671596
MA0076.18.11595e-06
MA0077.10.00646306
MA0078.10.167053
MA0081.154.9918
MA0083.11.67375
MA0084.10.158237
MA0087.10.0506661
MA0088.10.000274758
MA0089.10
MA0090.10.305171
MA0091.10.0672375
MA0092.10.0594985
MA0093.18.45811e-08
MA0095.10
MA0098.10
MA0100.10.000477907
MA0101.10.00170384
MA0103.10.0366496
MA0105.10.000104274
MA0106.10.00218591
MA0107.10.000214073
MA0108.20.952842
MA0109.10
MA0111.10.00530889
MA0113.10.198073
MA0114.10.00374488
MA0115.10.0758447
MA0116.13.40024e-05
MA0117.10.00293018
MA0119.11.32418
MA0122.10.0684888
MA0124.10.0242618
MA0125.10.0136181
MA0130.10
MA0131.10.000352873
MA0132.10
MA0133.10
MA0135.10.00617896
MA0136.15.30988
MA0139.14.57625e-08
MA0140.12.90102
MA0141.10.00608616
MA0142.10.00727866
MA0143.10.00531132
MA0144.16.75892e-06
MA0145.16.92433e-10
MA0146.10
MA0147.16.61937e-06
MA0148.10.107706
MA0149.17.68308
MA0062.20.000541728
MA0035.211.5109
MA0039.20
MA0138.20.202276
MA0002.20.0146182
MA0137.22.15371e-07
MA0104.21.03362e-07
MA0047.20.000651867
MA0112.20.058404
MA0065.24.41233
MA0150.10.000472879
MA0151.10
MA0152.11.27384
MA0153.10.0386318
MA0154.10.000354361
MA0155.11.44166e-06
MA0156.11.09648
MA0157.10.0736879
MA0158.10
MA0159.10.106302
MA0160.10.0157404
MA0161.10
MA0162.10
MA0163.11.49775e-05
MA0164.10.00348339
MA0080.27.25485
MA0018.20.0107189
MA0099.22.36163e-05
MA0079.24.24974
MA0102.20.187124
MA0258.10.339578
MA0259.11.16573e-09
MA0442.10
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