FFCP PHASE1:Hg19::chr2:10263300..10263329,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:10263300..10263329,+
|short_description=p5@RRM2
|description=CAGE_peak_5_at_RRM2_5end
|association_with_transcript=2bp_to_ENST00000474701_5end
|EntrezGene...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6241 | |EntrezGene=6241 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10452 | |HGNC=10452 | ||
|TSSclassifier=strong | |||
|UniProt=C9JXC1 | |UniProt=C9JXC1 | ||
|association_with_transcript=2bp_to_ENST00000474701_5end | |||
|cluster_id=chr2:10263300..10263329,+ | |||
|coexpression_cluster_id=C4112 | |||
|description=CAGE_peak_5_at_RRM2_5end | |||
|id=chr2:10263300..10263329,+ | |||
|ontology_enrichment_celltype=CL:0002319!6.86e-08!25;CL:0000095!3.63e-07!17;CL:0000123!3.63e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0000123;8.51e-11;2!CL:0000242;8.51e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.39e-11,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.43e-22!235;DOID:14566!5.76e-22!239;DOID:0050687!2.56e-16!143;DOID:305!4.93e-13!106;DOID:0050686!7.71e-08!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.75e-10,106;DOID:0050687,1.03e-09,143;DOID:162,6.54e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.51e-08!9 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@RRM2 | |||
}} | }} |
Latest revision as of 01:11, 16 September 2015
Short description: | p5@RRM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RRM2_5end |
Coexpression cluster: | C4112_carcinosarcoma_merkel_small_signet_retinoblastoma_carcinoid_mesenchymal |
Association with transcript: | 2bp_to_ENST00000474701_5end |
EntrezGene: | RRM2 |
HGNC: | 10452 |
UniProt: | C9JXC1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.39e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.75e-10 | 106 |
cell type cancer | 1.03e-09 | 143 |
cancer | 6.54e-07 | 235 |