FFCP PHASE1:Hg19::chr22:43343242..43343291,-: Difference between revisions
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|id=chr22:43343242..43343291,-
|short_description=p20@PACSIN2
|description=CAGE_peak_20_at_PACSIN2_5end
|association_with_transcript=-195bp_to_ENST00000403744,NM_00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11252 | |EntrezGene=11252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8571 | |HGNC=8571 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UNF0 | |UniProt=Q9UNF0 | ||
|association_with_transcript=-195bp_to_ENST00000403744,NM_007229,uc010gzg.2_5end | |||
|cluster_id=chr22:43343242..43343291,- | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_20_at_PACSIN2_5end | |||
|id=chr22:43343242..43343291,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002178;6.76e-18;3!CL:0000322;1.03e-17;3!CL:0000346;1.03e-17;3!CL:1000428;1.03e-17;3!CL:0002559;3.42e-11;5!CL:0002202;8.61e-07;9!CL:0002632;8.61e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,6.76e-18,3;CL:0000346,9.46e-18,3;CL:1000428,9.46e-18,3;CL:0000322,1.12e-17,3;CL:0002559,3.26e-11,5;CL:0002202,8.85e-07,9;CL:0002632,8.85e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.73e-14!106;DOID:0050687!1.59e-12!143;DOID:4929!1.22e-09!2;DOID:3905!8.09e-08!9;DOID:1324!7.86e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:3493;4.32e-26;2!DOID:4929;5.56e-26;2!DOID:3910;8.10e-26;2!DOID:3119;2.95e-15;14!DOID:3908;3.42e-11;5!DOID:299;5.06e-09;25!DOID:1325;2.26e-08;7!DOID:3904;2.26e-08;7!DOID:3905;8.61e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.32e-26,2;DOID:4929,5.56e-26,2;DOID:3910,9.18e-26,2;DOID:3119,2.95e-15,14;DOID:3908,3.60e-11,5;DOID:299,5.06e-09,25;DOID:1325,2.35e-08,7;DOID:3904,2.35e-08,7;DOID:3905,8.85e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001048!9.20e-12!168;UBERON:0000466!7.42e-11!126;UBERON:0002394!1.22e-10!4;UBERON:0003928!1.22e-10!4;UBERON:0002294!2.61e-10!7;UBERON:0001173!2.61e-10!7;UBERON:0004912!2.61e-10!7;UBERON:0000473!1.40e-08!8;UBERON:0001041!1.88e-08!98;UBERON:0005911!4.11e-08!82;UBERON:0007499!1.77e-07!25;UBERON:0009497!2.11e-07!25;UBERON:0000015!2.11e-07!25;UBERON:0002423!2.11e-07!25;UBERON:0006235!2.11e-07!25;UBERON:0004161!2.11e-07!25;UBERON:0000077!2.97e-07!130;UBERON:0002323!3.69e-07!46;UBERON:0009856!3.73e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.42e-50;1!UBERON:0003703;2.42e-50;1!UBERON:0001174;2.42e-50;1!UBERON:0004914;2.42e-50;1!UBERON:0004903;8.10e-26;2!UBERON:0002173;8.10e-26;2!UBERON:0002186;8.10e-26;2!UBERON:0000058;8.98e-21;10!UBERON:0002114;8.00e-18;2!UBERON:0004821;1.03e-17;3!UBERON:0007499;1.03e-17;3!UBERON:0003215;1.03e-17;3!UBERON:0010368;1.03e-17;3!UBERON:0009911;1.03e-17;3!UBERON:0002299;1.03e-17;3!UBERON:0000412;1.03e-17;3!UBERON:0001992;1.03e-17;3!UBERON:0006524;1.03e-17;3!UBERON:0008874;1.03e-17;3!UBERON:0002169;1.03e-17;3!UBERON:0004894;1.03e-17;3!UBERON:0002394;1.00e-13;4!UBERON:0003928;1.00e-13;4!UBERON:0009856;1.21e-13;4!UBERON:0000945;2.66e-11;5!UBERON:0010039;2.66e-11;5!UBERON:0002108;2.94e-11;4!UBERON:0002073;3.42e-11;5!UBERON:0005409;1.02e-09;22!UBERON:0002294;2.03e-08;7!UBERON:0001173;2.03e-08;7!UBERON:0004921;3.37e-07;33!UBERON:0002067;8.61e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.42e-50,1;UBERON:0003703,2.42e-50,1;UBERON:0001174,2.42e-50,1;UBERON:0004914,2.42e-50,1;UBERON:0004903,9.18e-26,2;UBERON:0002173,9.18e-26,2;UBERON:0002186,9.18e-26,2;UBERON:0002114,8.00e-18,2;UBERON:0000412,9.46e-18,3;UBERON:0001992,9.46e-18,3;UBERON:0004821,1.12e-17,3;UBERON:0003215,1.12e-17,3;UBERON:0010368,1.12e-17,3;UBERON:0009911,1.12e-17,3;UBERON:0002299,1.12e-17,3;UBERON:0006524,1.12e-17,3;UBERON:0008874,1.12e-17,3;UBERON:0002169,1.12e-17,3;UBERON:0004894,1.12e-17,3;UBERON:0000058,1.81e-11,19;UBERON:0002108,2.94e-11,4;UBERON:0002073,3.26e-11,5;UBERON:0005086,3.26e-11,5;UBERON:0002394,1.32e-09,6;UBERON:0003928,1.32e-09,6;UBERON:0007499,5.71e-09,25;UBERON:0005409,1.03e-08,25;UBERON:0009856,1.15e-08,26;UBERON:0000945,1.49e-07,8;UBERON:0010039,1.49e-07,8;UBERON:0002294,7.91e-07,9;UBERON:0001173,7.91e-07,9;UBERON:0004912,7.91e-07,9;UBERON:0002067,8.37e-07,9;UBERON:0004016,8.37e-07,9;UBERON:0010083,8.37e-07,9 | |||
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| ||
|short_description=p20@PACSIN2 | |||
}} | }} |
Latest revision as of 01:04, 25 September 2015
Short description: | p20@PACSIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_PACSIN2_5end |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | -195bp_to_ENST00000403744, NM_007229, uc010gzg.2_5end |
EntrezGene: | PACSIN2 |
HGNC: | 8571 |
UniProt: | Q9UNF0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 6.76e-18 | 3 |
hair follicle dermal papilla cell | 9.46e-18 | 3 |
stem cell of epidermis | 9.46e-18 | 3 |
pneumocyte | 1.12e-17 | 3 |
hair follicle cell | 3.26e-11 | 5 |
epithelial cell of tracheobronchial tree | 8.85e-07 | 9 |
epithelial cell of lower respiratory tract | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.42e-50 | 1 |
extrahepatic bile duct | 2.42e-50 | 1 |
common bile duct | 2.42e-50 | 1 |
duodenal papilla | 2.42e-50 | 1 |
bronchoalveolar duct junction | 9.18e-26 | 2 |
alveolar duct | 9.18e-26 | 2 |
bronchiole | 9.18e-26 | 2 |
duodenum | 8.00e-18 | 2 |
dermal papilla | 9.46e-18 | 3 |
papillary layer of dermis | 9.46e-18 | 3 |
pulmonary alveolus epithelium | 1.12e-17 | 3 |
alveolus | 1.12e-17 | 3 |
pulmonary lobule | 1.12e-17 | 3 |
lobule | 1.12e-17 | 3 |
alveolus of lung | 1.12e-17 | 3 |
alveolar system | 1.12e-17 | 3 |
pulmonary acinus | 1.12e-17 | 3 |
alveolar sac | 1.12e-17 | 3 |
alveolar wall | 1.12e-17 | 3 |
duct | 1.81e-11 | 19 |
small intestine | 2.94e-11 | 4 |
hair follicle | 3.26e-11 | 5 |
hair follicle placode | 3.26e-11 | 5 |
bile duct | 1.32e-09 | 6 |
digestive system duct | 1.32e-09 | 6 |
epithelial sac | 5.71e-09 | 25 |
gastrointestinal system | 1.03e-08 | 25 |
sac | 1.15e-08 | 26 |
stomach | 1.49e-07 | 8 |
food storage organ | 1.49e-07 | 8 |
biliary system | 7.91e-07 | 9 |
biliary tree | 7.91e-07 | 9 |
biliary bud | 7.91e-07 | 9 |
dermis | 8.37e-07 | 9 |
dermatome | 8.37e-07 | 9 |
future dermis | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.32e-26 | 2 |
tubular adenocarcinoma | 5.56e-26 | 2 |
lung adenocarcinoma | 9.18e-26 | 2 |
gastrointestinal system cancer | 2.95e-15 | 14 |
non-small cell lung carcinoma | 3.60e-11 | 5 |
adenocarcinoma | 5.06e-09 | 25 |
bronchus cancer | 2.35e-08 | 7 |
bronchogenic carcinoma | 2.35e-08 | 7 |
lung carcinoma | 8.85e-07 | 9 |