FFCP PHASE1:Hg19::chr7:120628882..120628908,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79974 | |EntrezGene=79974 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26159 | |HGNC=26159 | ||
|TSSclassifier=strong | |||
|UniProt=A4D0V7 | |UniProt=A4D0V7 | ||
|association_with_transcript=131bp_to_NM_024913,uc003vjq.3_5end | |association_with_transcript=131bp_to_NM_024913,uc003vjq.3_5end | ||
|cluster_id=chr7:120628882..120628908,+ | |||
|coexpression_cluster_id=C4648 | |coexpression_cluster_id=C4648 | ||
|description=CAGE_peak_6_at_C7orf58_5end | |description=CAGE_peak_6_at_C7orf58_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.96e-18!180;CL:0000057!9.36e-16!75;CL:0002620!3.18e-12!23;CL:0000680!2.73e-08!57;CL:0000056!2.73e-08!57;CL:0000355!2.73e-08!57;CL:0000187!2.06e-07!54 | |ontology_enrichment_celltype=CL:0000055!1.96e-18!180;CL:0000057!9.36e-16!75;CL:0002620!3.18e-12!23;CL:0000680!2.73e-08!57;CL:0000056!2.73e-08!57;CL:0000355!2.73e-08!57;CL:0000187!2.06e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.43e-11;23 | |ontology_enrichment_celltype_v019=CL:0002620;1.43e-11;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.06e-12,76;CL:0002620,8.40e-12,23 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.63e-14!83;UBERON:0002329!7.63e-14!83;UBERON:0003077!7.63e-14!83;UBERON:0003059!7.63e-14!83;UBERON:0007282!7.63e-14!83;UBERON:0009618!7.63e-14!83;UBERON:0007285!7.63e-14!83;UBERON:0004290!2.43e-11!70;UBERON:0003102!4.46e-11!95;UBERON:0000486!1.71e-09!82;UBERON:0005256!2.18e-09!143;UBERON:0002385!2.67e-09!63;UBERON:0001015!2.67e-09!63;UBERON:0000383!2.67e-09!63;UBERON:0001134!1.87e-08!61;UBERON:0002036!1.87e-08!61;UBERON:0003082!1.87e-08!61;UBERON:0002097!1.96e-08!40;UBERON:0002199!6.57e-08!45;UBERON:0002416!6.57e-08!45;UBERON:0003104!1.88e-07!238;UBERON:0009142!1.88e-07!238 | |ontology_enrichment_uberon=UBERON:0000914!7.63e-14!83;UBERON:0002329!7.63e-14!83;UBERON:0003077!7.63e-14!83;UBERON:0003059!7.63e-14!83;UBERON:0007282!7.63e-14!83;UBERON:0009618!7.63e-14!83;UBERON:0007285!7.63e-14!83;UBERON:0004290!2.43e-11!70;UBERON:0003102!4.46e-11!95;UBERON:0000486!1.71e-09!82;UBERON:0005256!2.18e-09!143;UBERON:0002385!2.67e-09!63;UBERON:0001015!2.67e-09!63;UBERON:0000383!2.67e-09!63;UBERON:0001134!1.87e-08!61;UBERON:0002036!1.87e-08!61;UBERON:0003082!1.87e-08!61;UBERON:0002097!1.96e-08!40;UBERON:0002199!6.57e-08!45;UBERON:0002416!6.57e-08!45;UBERON:0003104!1.88e-07!238;UBERON:0009142!1.88e-07!238 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,2.03e-09,122;UBERON:0002329,8.79e-09,71;UBERON:0003059,8.79e-09,71;UBERON:0007282,8.79e-09,71;UBERON:0004290,8.79e-09,71;UBERON:0009618,8.79e-09,71;UBERON:0003077,1.54e-08,72;UBERON:0007285,1.54e-08,72;UBERON:0003102,1.62e-08,99;UBERON:0007524,2.64e-08,73;UBERON:0004797,3.21e-08,7;UBERON:0002097,9.92e-08,41;UBERON:0007503,3.09e-07,78;UBERON:0003104,4.27e-07,160;UBERON:0009142,4.27e-07,160;UBERON:0005156,6.06e-07,59;UBERON:0000990,6.06e-07,59 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.422863212287913,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0.74259811776028,0.662794751455832,0.672325146451775,0,1.46062018077475,0.975865597581014,0,0,0,0.286235987131057,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0,1.0843174571537,0,0.579386075843295,0,0.973269740605272,0.283604451492204,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0.56530794192401,0,0,0,0,0.71153252537342,0,0.402829317109147,0,0.24406205754817,0,0,0.267899184852239,0,0,0,0,0,0,0,0,1.98788780678127,1.2663051166458,1.45650098894541,3.72887606973458,3.19201543978521,0,0,0,0.933633106199299,0.67355336034844,0.980771418680752,0.605429710579726,2.88087962239999,0.937285727335186,0.624320153660641,1.71141546463335,1.64393548606981,4.46251094846307,4.69431538667581,4.07307339436521,5.30800845262722,3.19369225010597,1.34323515528495,5.94001428641027,0.741800787835671,0,0,4.71341119071385,4.62938523526267,6.64953877162039,0.877955241761676,3.67785354958824,0.901428353439581,0.907457465280168,2.87023417102179,1.2813443329114,2.11931901159562,3.60109315301283,2.37020817248409,1.28820270022815,0.558350568994769,2.86919764810153,0.68205903612839,2.27190396819703,1.74894807420369,3.07127507955743,0.710019185033229,0.906768884048762,0.67824236924195,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,1.56449532329816,2.57296375277154,0,0.464367928031979,0.721879481669586,0.354920400119532,0.842923450390509,0.482022059766964,0.882351781859152,0.871517776369625,0.474541238222193,0.404493924480493,0.392442930250692,0.769494313892781,0,0,0,0,0,0,2.36315962672562,0,0,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0.984868024349589,0,0.148631162288728,0,0,0.141775097242386,0.268675568108545,0,0,0,0,0,0,0.12624243342638,1.0159663086747,0.381988425558278,0,0,0.308482478109971,0,0.571652865261156,1.23344192779897,0.87192013766656,2.56684000373325,0.904902010304444,0,0.845302752556,5.05282421511254,1.04007436911366,0.257207374262142,0,0.799266537048298,4.43231780340257,0,0,2.28015329005615,1.42156779497018,0.791951872933429,0.301439377059586,0,0,2.43247561282381,1.00451418286425,0,0.718874566474748,0,0,3.32997005335432,0.205476322550383,1.96967059563885,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.613457458595699,1.50051156317903,1.35632511849868,0.207970861530807,0.535286966391485,1.10391690523754,1.87426263988341,1.20378439891088,0,0,0,0,4.43106433787223,0.587403472388222,0,0,0,0,0,0,0,0,0.460385919864187,0,0.512556597022804,0.511707249066704,0.160853921143607,0,0.616838775210622,0.532685175939381,1.88892458831761,1.55776328755086,1.74315567689939,0,0,0,1.26295892981067,2.54927635209404,1.70461739447251,0.451199612907412,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,1.854738209659,0.0915694648183434,0.082509499920588,0,0,0,0.676695028044854,0.924291702687866,0.460511024178389,1.10269257987624,1.39646318328756,1.30515024522806,1.53407929348982,0.178064071293475,0.165284915360978,0.384380134730212,0,0,1.39453664789186,3.1481234683064,0,1.23213432070436,0.532306030317022,0,0.55597265731176,0.429374660225974,3.34942532423701,2.84741482246853,0.953150969619124,0.255897791311334,1.28381696410176,0.636406495851874,0,7.01502584574927,3.29444435683266,2.23843564456804,0.404364963146632,0,0,0.975267478179181,0.487426979262569,1.05650146756755,3.41249778519964,1.27264888758341,0,0,1.32687795048244,0.876901770507525,0,1.31178950409327,0.202910376962704,0,0.563391205064483,1.57752487424457,0.294747123039363,0.35667105148125,6.38569915327076,0.211107635297664,0,0,0.699869440489966,0,0,1.08890984861323,1.60044461320525,0,0,0,0.229723400206959,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,2.93016358543788,0,0,0,0,0,0,0,0.140669416410513,0.667852230137435,0,0,2.78947183551498,2.76283915531148,0,1.1249555075237,0,0.933118762985422,0.718946809178615,0,0,5.03081368748361,0,5.55684950723184,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0.658156191461918,0,0,2.38545801361771,0,0,0,0,0,2.38153742844842,0.533034776018635,0,0,0,2.25595660617181,2.54881294613061,2.68514539161348,1.70778359451767,0,0,0,0,0,0,3.00755719311353,3.05515072466813,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,1.18375320854817,2.41981432097328,0,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,3.31980669659857,2.0638323896594,0,0.292357268344742,0,2.23074737923365,0.264768380074501,1.12990370390266,1.09633539717401,0.19871461170299,0.316553979779393,0,0,2.13452994739353,0,0,0,0,0.14405479798815,0,0,0.407712618220842,0.104602846312333,1.6319714821811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| ||
|short_description=p6@C7orf58 | |short_description=p6@C7orf58 | ||
}} | }} |
Latest revision as of 21:53, 15 September 2015
Short description: | p6@C7orf58 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_C7orf58_5end |
Coexpression cluster: | C4648_chronic_smooth_mature_aorta_bladder_heart_mesenchymal |
Association with transcript: | 131bp_to_NM_024913, uc003vjq.3_5end |
EntrezGene: | C7orf58 |
HGNC: | 26159 |
UniProt: | A4D0V7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.06e-12 | 76 |
skin fibroblast | 8.40e-12 | 23 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 2.03e-09 | 122 |
somite | 8.79e-09 | 71 |
presomitic mesoderm | 8.79e-09 | 71 |
presumptive segmental plate | 8.79e-09 | 71 |
dermomyotome | 8.79e-09 | 71 |
trunk paraxial mesoderm | 8.79e-09 | 71 |
paraxial mesoderm | 1.54e-08 | 72 |
presumptive paraxial mesoderm | 1.54e-08 | 72 |
surface structure | 1.62e-08 | 99 |
dense mesenchyme tissue | 2.64e-08 | 73 |
blood vessel layer | 3.21e-08 | 7 |
skin of body | 9.92e-08 | 41 |
epithelial vesicle | 3.09e-07 | 78 |
mesenchyme | 4.27e-07 | 160 |
entire embryonic mesenchyme | 4.27e-07 | 160 |
reproductive structure | 6.06e-07 | 59 |
reproductive system | 6.06e-07 | 59 |