FFCP PHASE1:Hg19::chr2:234763147..234763211,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55355 | |EntrezGene=55355 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25444 | |HGNC=25444 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NCD3,C9JWC4,F8WCV1 | |UniProt=Q8NCD3,C9JWC4,F8WCV1 | ||
|association_with_transcript=0bp_to_ENST00000411486,ENST00000414924,ENST00000432087,ENST00000441687,ENST00000453122,NM_018410,uc002vvg.2,uc010znd.1,uc010zne.1_5end | |association_with_transcript=0bp_to_ENST00000411486,ENST00000414924,ENST00000432087,ENST00000441687,ENST00000453122,NM_018410,uc002vvg.2,uc010znd.1,uc010zne.1_5end | ||
|cluster_id=chr2:234763147..234763211,- | |||
|coexpression_cluster_id=C281 | |coexpression_cluster_id=C281 | ||
|description=CAGE_peak_1_at_HJURP_5end | |description=CAGE_peak_1_at_HJURP_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000548!4.76e-20!679;CL:0000004!4.76e-20!679;CL:0000255!4.76e-20!679;CL:0000012!8.23e-20!682;CL:0000066!1.06e-19!254;CL:0002321!2.15e-12!248;CL:0000220!6.75e-12!246;CL:0000003!5.47e-11!722;CL:0000055!2.92e-10!180;CL:0000063!2.39e-08!578;CL:0000144!1.20e-07!625;CL:0000333!1.72e-07!41;CL:0000076!2.02e-07!62 | |ontology_enrichment_celltype=CL:0000548!4.76e-20!679;CL:0000004!4.76e-20!679;CL:0000255!4.76e-20!679;CL:0000012!8.23e-20!682;CL:0000066!1.06e-19!254;CL:0002321!2.15e-12!248;CL:0000220!6.75e-12!246;CL:0000003!5.47e-11!722;CL:0000055!2.92e-10!180;CL:0000063!2.39e-08!578;CL:0000144!1.20e-07!625;CL:0000333!1.72e-07!41;CL:0000076!2.02e-07!62 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.42e-20,253;CL:0002321,3.56e-12,250;CL:0000333,1.86e-07,41;CL:0000076,5.26e-07,63 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!1.75e-44!235;DOID:14566!2.42e-43!239;DOID:0050687!2.03e-22!143;DOID:0050686!3.12e-21!137;DOID:305!1.92e-16!106;DOID:2531!1.63e-15!51;DOID:0060083!1.63e-15!51;DOID:1240!8.18e-13!39;DOID:8692!7.83e-09!31 | |ontology_enrichment_disease=DOID:162!1.75e-44!235;DOID:14566!2.42e-43!239;DOID:0050687!2.03e-22!143;DOID:0050686!3.12e-21!137;DOID:305!1.92e-16!106;DOID:2531!1.63e-15!51;DOID:0060083!1.63e-15!51;DOID:1240!8.18e-13!39;DOID:8692!7.83e-09!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;3.38e-10;39!DOID:2531;8.01e-10;51!DOID:0060083;8.01e-10;51!DOID:8692;1.39e-08;31 | |ontology_enrichment_disease_v019=DOID:1240;3.38e-10;39!DOID:2531;8.01e-10;51!DOID:0060083;8.01e-10;51!DOID:8692;1.39e-08;31 | ||
|ontology_enrichment_disease_v019_2=DOID:162,4.20e-45,235;DOID:14566,6.03e-44,239;DOID:0050687,1.11e-22,143;DOID:0050686,1.52e-21,137;DOID:305,1.26e-16,106;DOID:2531,1.09e-15,51;DOID:0060083,1.09e-15,51;DOID:1240,5.92e-13,39;DOID:8692,6.35e-09,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@HJURP | |short_description=p1@HJURP | ||
}} | }} |
Latest revision as of 23:51, 15 September 2015
Short description: | p1@HJURP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HJURP_5end |
Coexpression cluster: | C281_Hodgkin_Reticulocytes_chronic_NK_acute_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000411486, ENST00000414924, ENST00000432087, ENST00000441687, ENST00000453122, NM_018410, uc002vvg.2, uc010znd.1, uc010zne.1_5end |
EntrezGene: | HJURP |
HGNC: | 25444 |
UniProt: | Q8NCD3C9JWC4F8WCV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.42e-20 | 253 |
embryonic cell | 3.56e-12 | 250 |
migratory neural crest cell | 1.86e-07 | 41 |
squamous epithelial cell | 5.26e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.20e-45 | 235 |
disease of cellular proliferation | 6.03e-44 | 239 |
cell type cancer | 1.11e-22 | 143 |
organ system cancer | 1.52e-21 | 137 |
carcinoma | 1.26e-16 | 106 |
hematologic cancer | 1.09e-15 | 51 |
immune system cancer | 1.09e-15 | 51 |
leukemia | 5.92e-13 | 39 |
myeloid leukemia | 6.35e-09 | 31 |