FFCP PHASE1:Hg19::chr4:184826418..184826522,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56977 | |EntrezGene=56977 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25450 | |HGNC=25450 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P2F5 | |UniProt=Q9P2F5 | ||
|association_with_transcript=0bp_to_ENST00000308497,ENST00000438269,NM_020225,uc003ivz.1_5end | |association_with_transcript=0bp_to_ENST00000308497,ENST00000438269,NM_020225,uc003ivz.1_5end | ||
|cluster_id=chr4:184826418..184826522,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_STOX2_5end | |description=CAGE_peak_1_at_STOX2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000147!2.98e-07!14 | |ontology_enrichment_celltype=CL:0000147!2.98e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000147;6.23e-09;14!CL:0000148;2.96e-08;10 | |ontology_enrichment_celltype_v019=CL:0000147;6.23e-09;14!CL:0000148;2.96e-08;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000147,6.70e-09,14;CL:0000148,4.25e-08,10;CL:0000541,4.25e-08,10;CL:0000133,1.81e-07,59;CL:0000333,1.88e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.11e-19;82 | |ontology_enrichment_development_v019=UBERON:0006601;8.11e-19;82 | ||
|ontology_enrichment_disease=DOID:171!3.62e-07!10 | |ontology_enrichment_disease=DOID:171!3.62e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:171;5.63e-10;10!DOID:169;9.55e-07;6 | |ontology_enrichment_disease_v019=DOID:171;5.63e-10;10!DOID:169;9.55e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:171,8.07e-10,10;DOID:169,9.51e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.58e-47!115;UBERON:0000073!1.93e-44!94;UBERON:0001016!1.93e-44!94;UBERON:0005743!6.05e-43!86;UBERON:0001049!2.98e-41!57;UBERON:0005068!2.98e-41!57;UBERON:0006241!2.98e-41!57;UBERON:0007135!2.98e-41!57;UBERON:0001017!6.66e-41!82;UBERON:0002346!8.90e-40!90;UBERON:0003075!1.98e-37!86;UBERON:0007284!1.98e-37!86;UBERON:0002616!1.84e-34!59;UBERON:0000955!5.23e-34!69;UBERON:0006238!5.23e-34!69;UBERON:0002780!2.89e-32!41;UBERON:0001890!2.89e-32!41;UBERON:0006240!2.89e-32!41;UBERON:0003080!5.61e-31!42;UBERON:0000924!1.58e-29!173;UBERON:0006601!1.58e-29!173;UBERON:0003056!8.99e-28!61;UBERON:0004121!1.57e-27!169;UBERON:0001893!2.10e-27!34;UBERON:0002020!3.38e-27!34;UBERON:0003528!3.38e-27!34;UBERON:0000153!7.60e-27!129;UBERON:0007811!7.60e-27!129;UBERON:0002791!1.37e-26!33;UBERON:0000033!2.32e-26!123;UBERON:0001869!1.04e-25!32;UBERON:0000956!2.29e-20!25;UBERON:0000203!2.29e-20!25;UBERON:0002619!3.94e-19!22;UBERON:0001950!1.02e-17!20;UBERON:0000481!5.20e-14!347;UBERON:0000922!1.31e-13!612;UBERON:0000468!3.41e-12!659;UBERON:0000025!4.40e-12!194;UBERON:0002050!1.19e-11!605;UBERON:0005423!1.19e-11!605;UBERON:0004111!1.66e-11!241;UBERON:0000923!2.55e-11!604;UBERON:0005291!2.55e-11!604;UBERON:0006598!2.55e-11!604;UBERON:0002532!2.55e-11!604;UBERON:0003076!3.64e-11!15;UBERON:0003057!3.64e-11!15;UBERON:0000475!5.39e-11!365;UBERON:0000119!9.93e-11!312;UBERON:0000062!2.08e-10!511;UBERON:0000483!2.61e-10!309;UBERON:0004732!5.86e-10!13;UBERON:0000064!1.10e-09!219;UBERON:0000477!2.02e-09!286;UBERON:0000467!2.37e-09!625;UBERON:0000480!3.22e-09!626;UBERON:0004733!4.18e-09!12;UBERON:0002028!4.18e-09!12;UBERON:0007277!4.18e-09!12;UBERON:0002420!1.84e-08!9;UBERON:0007245!1.84e-08!9;UBERON:0010009!1.84e-08!9;UBERON:0010011!1.84e-08!9;UBERON:0000454!1.84e-08!9;UBERON:0002308!3.00e-08!9;UBERON:0000125!3.00e-08!9;UBERON:0001871!1.07e-07!7;UBERON:0002680!5.37e-07!9;UBERON:0001895!5.37e-07!9;UBERON:0010092!5.37e-07!9;UBERON:0009663!7.81e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!3.58e-47!115;UBERON:0000073!1.93e-44!94;UBERON:0001016!1.93e-44!94;UBERON:0005743!6.05e-43!86;UBERON:0001049!2.98e-41!57;UBERON:0005068!2.98e-41!57;UBERON:0006241!2.98e-41!57;UBERON:0007135!2.98e-41!57;UBERON:0001017!6.66e-41!82;UBERON:0002346!8.90e-40!90;UBERON:0003075!1.98e-37!86;UBERON:0007284!1.98e-37!86;UBERON:0002616!1.84e-34!59;UBERON:0000955!5.23e-34!69;UBERON:0006238!5.23e-34!69;UBERON:0002780!2.89e-32!41;UBERON:0001890!2.89e-32!41;UBERON:0006240!2.89e-32!41;UBERON:0003080!5.61e-31!42;UBERON:0000924!1.58e-29!173;UBERON:0006601!1.58e-29!173;UBERON:0003056!8.99e-28!61;UBERON:0004121!1.57e-27!169;UBERON:0001893!2.10e-27!34;UBERON:0002020!3.38e-27!34;UBERON:0003528!3.38e-27!34;UBERON:0000153!7.60e-27!129;UBERON:0007811!7.60e-27!129;UBERON:0002791!1.37e-26!33;UBERON:0000033!2.32e-26!123;UBERON:0001869!1.04e-25!32;UBERON:0000956!2.29e-20!25;UBERON:0000203!2.29e-20!25;UBERON:0002619!3.94e-19!22;UBERON:0001950!1.02e-17!20;UBERON:0000481!5.20e-14!347;UBERON:0000922!1.31e-13!612;UBERON:0000468!3.41e-12!659;UBERON:0000025!4.40e-12!194;UBERON:0002050!1.19e-11!605;UBERON:0005423!1.19e-11!605;UBERON:0004111!1.66e-11!241;UBERON:0000923!2.55e-11!604;UBERON:0005291!2.55e-11!604;UBERON:0006598!2.55e-11!604;UBERON:0002532!2.55e-11!604;UBERON:0003076!3.64e-11!15;UBERON:0003057!3.64e-11!15;UBERON:0000475!5.39e-11!365;UBERON:0000119!9.93e-11!312;UBERON:0000062!2.08e-10!511;UBERON:0000483!2.61e-10!309;UBERON:0004732!5.86e-10!13;UBERON:0000064!1.10e-09!219;UBERON:0000477!2.02e-09!286;UBERON:0000467!2.37e-09!625;UBERON:0000480!3.22e-09!626;UBERON:0004733!4.18e-09!12;UBERON:0002028!4.18e-09!12;UBERON:0007277!4.18e-09!12;UBERON:0002420!1.84e-08!9;UBERON:0007245!1.84e-08!9;UBERON:0010009!1.84e-08!9;UBERON:0010011!1.84e-08!9;UBERON:0000454!1.84e-08!9;UBERON:0002308!3.00e-08!9;UBERON:0000125!3.00e-08!9;UBERON:0001871!1.07e-07!7;UBERON:0002680!5.37e-07!9;UBERON:0001895!5.37e-07!9;UBERON:0010092!5.37e-07!9;UBERON:0009663!7.81e-07!7 | ||
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| ||
|short_description=p1@STOX2 | |short_description=p1@STOX2 | ||
}} | }} |
Latest revision as of 00:32, 17 September 2015
Short description: | p1@STOX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STOX2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000308497, ENST00000438269, NM_020225, uc003ivz.1_5end |
EntrezGene: | STOX2 |
HGNC: | 25450 |
UniProt: | Q9P2F5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 6.70e-09 | 14 |
melanocyte | 4.25e-08 | 10 |
melanoblast | 4.25e-08 | 10 |
neurectodermal cell | 1.81e-07 | 59 |
migratory neural crest cell | 1.88e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.07e-10 | 10 |
neuroendocrine tumor | 9.51e-07 | 6 |