FFCP PHASE1:Hg19::chr19:1907961..1907987,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=113179 | |EntrezGene=113179 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25151 | |HGNC=25151 | ||
|TSSclassifier=strong | |||
|UniProt=C9JFC1 | |UniProt=C9JFC1 | ||
|association_with_transcript=-30bp_to_ENST00000454697_5end | |association_with_transcript=-30bp_to_ENST00000454697_5end | ||
|cluster_id=chr19:1907961..1907987,+ | |||
|coexpression_cluster_id=C3620 | |coexpression_cluster_id=C3620 | ||
|description=CAGE_peak_2_at_ADAT3_5end | |description=CAGE_peak_2_at_ADAT3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!9.81e-09!3 | |ontology_enrichment_celltype=CL:0002541!9.81e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000239;1.67e-09;3!CL:1000615;1.67e-09;3!CL:0002541;1.67e-09;3!CL:0002306;1.67e-09;3 | |ontology_enrichment_celltype_v019=CL:0000239;1.67e-09;3!CL:1000615;1.67e-09;3!CL:0002541;1.67e-09;3!CL:0002306;1.67e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.54e-09,3;CL:1000615,1.54e-09,3;CL:0002306,1.54e-09,3;CL:0002541,1.81e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006298;4.61e-26;1 | |ontology_enrichment_development_v019=UBERON:0006298;4.61e-26;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;9.40e-14;2 | |ontology_enrichment_disease_v019=DOID:3493;9.40e-14;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,1.07e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.93e-20!115;UBERON:0003135!2.86e-14!11;UBERON:0003101!3.59e-14!22;UBERON:0000079!3.59e-14!22;UBERON:0002553!1.34e-09!70;UBERON:0006947!4.97e-09!3;UBERON:0004054!4.97e-09!3;UBERON:0003064!8.93e-09!37;UBERON:0000476!9.81e-09!3;UBERON:0000920!9.81e-09!3;UBERON:0005156!4.12e-08!59;UBERON:0000990!4.12e-08!59;UBERON:0000473!5.29e-08!8;UBERON:0000464!5.32e-08!104;UBERON:0000062!6.37e-08!511;UBERON:0000466!1.17e-07!126;UBERON:0001044!1.52e-07!6;UBERON:0003293!1.52e-07!6;UBERON:0003294!1.52e-07!6;UBERON:0010047!1.52e-07!6;UBERON:0000167!1.52e-07!6;UBERON:0004876!3.17e-07!20;UBERON:0006554!7.50e-07!44;UBERON:0005904!7.65e-07!4 | |ontology_enrichment_uberon=UBERON:0007023!4.93e-20!115;UBERON:0003135!2.86e-14!11;UBERON:0003101!3.59e-14!22;UBERON:0000079!3.59e-14!22;UBERON:0002553!1.34e-09!70;UBERON:0006947!4.97e-09!3;UBERON:0004054!4.97e-09!3;UBERON:0003064!8.93e-09!37;UBERON:0000476!9.81e-09!3;UBERON:0000920!9.81e-09!3;UBERON:0005156!4.12e-08!59;UBERON:0000990!4.12e-08!59;UBERON:0000473!5.29e-08!8;UBERON:0000464!5.32e-08!104;UBERON:0000062!6.37e-08!511;UBERON:0000466!1.17e-07!126;UBERON:0001044!1.52e-07!6;UBERON:0003293!1.52e-07!6;UBERON:0003294!1.52e-07!6;UBERON:0010047!1.52e-07!6;UBERON:0000167!1.52e-07!6;UBERON:0004876!3.17e-07!20;UBERON:0006554!7.50e-07!44;UBERON:0005904!7.65e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001736;4.61e-26;1!UBERON:0001044;1.33e-17;6!UBERON:0003293;1.33e-17;6!UBERON:0003294;1.33e-17;6!UBERON:0010047;1.33e-17;6!UBERON:0003408;1.33e-17;6!UBERON:0000167;1.33e-17;6!UBERON:0001829;9.40e-14;2!UBERON:0004921;5.70e-11;33!UBERON:0006853;1.67e-09;3!UBERON:0007685;1.67e-09;3!UBERON:0004134;1.67e-09;3!UBERON:0003124;1.67e-09;3!UBERON:0000920;1.67e-09;3!UBERON:0001041;4.19e-08;14 | |ontology_enrichment_uberon_v019=UBERON:0001736;4.61e-26;1!UBERON:0001044;1.33e-17;6!UBERON:0003293;1.33e-17;6!UBERON:0003294;1.33e-17;6!UBERON:0010047;1.33e-17;6!UBERON:0003408;1.33e-17;6!UBERON:0000167;1.33e-17;6!UBERON:0001829;9.40e-14;2!UBERON:0004921;5.70e-11;33!UBERON:0006853;1.67e-09;3!UBERON:0007685;1.67e-09;3!UBERON:0004134;1.67e-09;3!UBERON:0003124;1.67e-09;3!UBERON:0000920;1.67e-09;3!UBERON:0001041;4.19e-08;14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,3.58e-26,1;UBERON:0006298,3.58e-26,1;UBERON:0001044,1.22e-17,6;UBERON:0003293,1.22e-17,6;UBERON:0003294,1.22e-17,6;UBERON:0010047,1.22e-17,6;UBERON:0000167,1.22e-17,6;UBERON:0001829,8.28e-14,2;UBERON:0003408,5.41e-11,10;UBERON:0006853,1.54e-09,3;UBERON:0007685,1.54e-09,3;UBERON:0004134,1.54e-09,3;UBERON:0000920,1.81e-09,3 | |||
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| ||
|short_description=p2@ADAT3 | |short_description=p2@ADAT3 | ||
}} | }} |
Latest revision as of 19:06, 16 September 2015
Short description: | p2@ADAT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ADAT3_5end |
Coexpression cluster: | C3620_small_salivary_colon_seminal_submaxillary_duodenum_rectum |
Association with transcript: | -30bp_to_ENST00000454697_5end |
EntrezGene: | ADAT3 |
HGNC: | 25151 |
UniProt: | C9JFC1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.54e-09 | 3 |
kidney cortex tubule cell | 1.54e-09 | 3 |
epithelial cell of proximal tubule | 1.54e-09 | 3 |
chorionic membrane mesenchymal stem cell | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
submandibular gland | 3.58e-26 | 1 |
submandibular gland primordium | 3.58e-26 | 1 |
saliva-secreting gland | 1.22e-17 | 6 |
gland of oral region | 1.22e-17 | 6 |
gland of foregut | 1.22e-17 | 6 |
oral gland | 1.22e-17 | 6 |
oral cavity | 1.22e-17 | 6 |
major salivary gland | 8.28e-14 | 2 |
gland of gut | 5.41e-11 | 10 |
renal cortex tubule | 1.54e-09 | 3 |
region of nephron tubule | 1.54e-09 | 3 |
proximal tubule | 1.54e-09 | 3 |
egg chorion | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.07e-13 | 2 |