FFCP PHASE1:Hg19::chr22:38369134..38369144,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:38369134..38369144,-
|short_description=p@chr22:38369134..38369144,-
|description=CAGE_peak_at_chr22:38369134..38369144,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr22:38369134..38369144,- | |||
|coexpression_cluster_id=C327 | |||
|description=CAGE_peak_at_chr22:38369134..38369144,- | |||
|id=chr22:38369134..38369144,- | |||
|ontology_enrichment_celltype=CL:0000147!4.40e-18!14;CL:0000148!2.70e-17!10;CL:0000541!2.70e-17!10;CL:0000710!7.49e-08!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;7.26e-36;10!CL:0000147;1.52e-25;14!CL:0000710;8.77e-18;20!CL:0002567;3.86e-14;3!CL:0000075;4.48e-13;27!CL:0002566;3.11e-11;1!CL:0002077;9.66e-10;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.87e-36,10;CL:0000541,6.87e-36,10;CL:0000147,1.47e-25,14;CL:0000710,8.54e-18,20;CL:0002567,4.14e-14,3;CL:0000075,4.39e-13,27;CL:0002566,2.68e-11,1;CL:0002077,2.64e-10,34;CL:0000333,4.69e-08,41 | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.24e-11;1!UBERON:0008801;1.24e-11;1!UBERON:0006601;2.15e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr22:38369134..38369144,- | |||
}} | }} |
Latest revision as of 21:06, 28 July 2015
Short description: | p@chr22:38369134..38369144, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:38369134..38369144, - |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.87e-36 | 10 |
melanoblast | 6.87e-36 | 10 |
pigment cell | 1.47e-25 | 14 |
neurecto-epithelial cell | 8.54e-18 | 20 |
light melanocyte | 4.14e-14 | 3 |
columnar/cuboidal epithelial cell | 4.39e-13 | 27 |
dark melanocyte | 2.68e-11 | 1 |
ecto-epithelial cell | 2.64e-10 | 34 |
migratory neural crest cell | 4.69e-08 | 41 |