FFCP PHASE1:Hg19::chr22:38302285..38302361,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:38302285..38302361,+
|short_description=p1@MICALL1
|description=CAGE_peak_1_at_MICALL1_5end
|association_with_transcript=0bp_to_ENST00000215957,uc003aui.2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=85377 | |EntrezGene=85377 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29804 | |HGNC=29804 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N3F8 | |UniProt=Q8N3F8 | ||
|association_with_transcript=0bp_to_ENST00000215957,uc003aui.2_5end | |||
|cluster_id=chr22:38302285..38302361,+ | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_1_at_MICALL1_5end | |||
|id=chr22:38302285..38302361,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.36e-21!254;CL:0002321!8.72e-14!248;CL:0000220!1.07e-13!246;CL:0000076!1.03e-10!62;CL:0002076!3.20e-10!43;CL:0000223!1.02e-09!59;CL:0002368!3.81e-07!13;CL:0000115!4.49e-07!35;CL:1000449!6.98e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.68e-08;42!CL:1000449;1.62e-07;15!CL:0002368;4.16e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.82e-21,253;CL:0002321,6.26e-14,250;CL:0002076,9.66e-11,42;CL:0000076,2.59e-10,63;CL:0000223,4.03e-10,58;CL:1000449,1.68e-07,15;CL:0000115,2.02e-07,36;CL:0002368,3.81e-07,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!6.49e-11!625;UBERON:0000480!7.73e-11!626;UBERON:0000468!1.54e-09!659;UBERON:0001008!1.80e-09!45;UBERON:0006554!2.51e-09!44;UBERON:0000489!3.26e-09!32;UBERON:0004111!3.05e-08!241;UBERON:0000062!1.02e-07!511;UBERON:0002113!1.13e-07!27;UBERON:0003918!1.13e-07!27;UBERON:0005095!1.13e-07!27;UBERON:0007687!1.13e-07!27;UBERON:0004876!1.25e-07!20;UBERON:0000080!1.49e-07!18;UBERON:0002120!1.49e-07!18;UBERON:0004875!1.49e-07!18;UBERON:0005721!1.49e-07!18;UBERON:0005754!1.49e-07!18;UBERON:0007297!1.49e-07!18;UBERON:0005177!2.12e-07!107;UBERON:0005631!2.49e-07!14;UBERON:0000158!2.49e-07!14;UBERON:0000464!2.91e-07!104;UBERON:0003103!2.93e-07!69;UBERON:0000922!3.13e-07!612;UBERON:0006555!4.38e-07!17;UBERON:0005103!4.38e-07!17;UBERON:0000083!4.38e-07!17;UBERON:0009201!4.38e-07!17;UBERON:0004819!4.38e-07!17;UBERON:0006553!4.38e-07!17;UBERON:0003074!4.38e-07!17;UBERON:0003060!4.38e-07!17;UBERON:0002553!4.88e-07!70;UBERON:0004119!5.27e-07!169;UBERON:0000925!5.27e-07!169;UBERON:0006595!5.27e-07!169;UBERON:0000466!5.42e-07!126;UBERON:0004211!6.98e-07!16;UBERON:0001285!6.98e-07!16;UBERON:0007684!6.98e-07!16;UBERON:0003220!6.98e-07!16;UBERON:0004208!6.98e-07!16;UBERON:0002050!8.96e-07!605;UBERON:0005423!8.96e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.28e-10;30!UBERON:0001008;1.28e-10;30!UBERON:0000489;5.65e-09;29!UBERON:0006555;1.62e-07;15!UBERON:0004819;1.62e-07;15!UBERON:0001285;1.62e-07;15!UBERON:0007684;1.62e-07;15!UBERON:0002113;1.85e-07;24!UBERON:0011143;1.85e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001008,9.96e-12,48;UBERON:0006554,1.38e-11,47;UBERON:0000489,1.13e-09,31;UBERON:0002113,4.04e-08,26;UBERON:0003918,4.04e-08,26;UBERON:0011143,4.04e-08,26;UBERON:0005095,4.04e-08,26;UBERON:0007687,4.04e-08,26;UBERON:0004111,5.41e-08,240;UBERON:0006555,1.09e-07,16;UBERON:0004819,1.09e-07,16;UBERON:0004211,1.68e-07,15;UBERON:0009773,1.68e-07,15;UBERON:0001231,1.68e-07,15;UBERON:0001285,1.68e-07,15;UBERON:0007684,1.68e-07,15;UBERON:0004208,1.68e-07,15;UBERON:0003103,1.80e-07,68;UBERON:0005177,2.11e-07,101;UBERON:0005631,2.49e-07,14;UBERON:0000158,2.49e-07,14;UBERON:0000922,2.83e-07,592 | |||
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| ||
|short_description=p1@MICALL1 | |||
}} | }} |
Latest revision as of 06:47, 20 September 2015
Short description: | p1@MICALL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MICALL1_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 0bp_to_ENST00000215957, uc003aui.2_5end |
EntrezGene: | MICALL1 |
HGNC: | 29804 |
UniProt: | Q8N3F8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.82e-21 | 253 |
embryonic cell | 6.26e-14 | 250 |
endo-epithelial cell | 9.66e-11 | 42 |
squamous epithelial cell | 2.59e-10 | 63 |
endodermal cell | 4.03e-10 | 58 |
epithelial cell of nephron | 1.68e-07 | 15 |
endothelial cell | 2.02e-07 | 36 |
respiratory epithelial cell | 3.81e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
renal system | 9.96e-12 | 48 |
urinary system structure | 1.38e-11 | 47 |
cavitated compound organ | 1.13e-09 | 31 |
kidney | 4.04e-08 | 26 |
kidney mesenchyme | 4.04e-08 | 26 |
upper urinary tract | 4.04e-08 | 26 |
kidney rudiment | 4.04e-08 | 26 |
kidney field | 4.04e-08 | 26 |
anatomical conduit | 5.41e-08 | 240 |
excretory tube | 1.09e-07 | 16 |
kidney epithelium | 1.09e-07 | 16 |
nephron epithelium | 1.68e-07 | 15 |
renal tubule | 1.68e-07 | 15 |
nephron tubule | 1.68e-07 | 15 |
nephron | 1.68e-07 | 15 |
uriniferous tubule | 1.68e-07 | 15 |
nephrogenic mesenchyme | 1.68e-07 | 15 |
compound organ | 1.80e-07 | 68 |
trunk region element | 2.11e-07 | 101 |
extraembryonic membrane | 2.49e-07 | 14 |
membranous layer | 2.49e-07 | 14 |
embryo | 2.83e-07 | 592 |