FFCP PHASE1:Hg19::chr12:97856211..97856221,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:97856211..97856221,+ | |||
|coexpression_cluster_id=C1022 | |coexpression_cluster_id=C1022 | ||
|description=CAGE_peak_at_chr12:97856211..97856221,+ | |description=CAGE_peak_at_chr12:97856211..97856221,+ | ||
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|ontology_enrichment_celltype=CL:0000064!3.43e-30!3;CL:0005012!3.43e-30!3;CL:0000067!3.43e-30!3;CL:0002304!3.43e-30!3;CL:0000710!5.43e-08!20 | |ontology_enrichment_celltype=CL:0000064!3.43e-30!3;CL:0005012!3.43e-30!3;CL:0000067!3.43e-30!3;CL:0002304!3.43e-30!3;CL:0000710!5.43e-08!20 | ||
|ontology_enrichment_celltype_v019=CL:0000064;5.40e-147;3!CL:0000067;5.40e-147;3!CL:0005012;5.40e-147;3!CL:0002304;5.40e-147;3!CL:0000710;4.25e-23;20!CL:0000075;2.21e-17;27!CL:0002077;3.98e-14;34 | |ontology_enrichment_celltype_v019=CL:0000064;5.40e-147;3!CL:0000067;5.40e-147;3!CL:0005012;5.40e-147;3!CL:0002304;5.40e-147;3!CL:0000710;4.25e-23;20!CL:0000075;2.21e-17;27!CL:0002077;3.98e-14;34 | ||
|ontology_enrichment_celltype_v019_2=CL:0000064,8.93e-147,3;CL:0000067,8.93e-147,3;CL:0005012,8.93e-147,3;CL:0002304,8.93e-147,3;CL:0000710,4.59e-23,20;CL:0000075,2.34e-17,27;CL:0002077,5.47e-14,34;CL:0000133,3.42e-08,59;CL:0000221,6.78e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.99e-50;1!UBERON:0003056;9.45e-18;3 | |ontology_enrichment_development_v019=UBERON:0005425;3.99e-50;1!UBERON:0003056;9.45e-18;3 | ||
|ontology_enrichment_disease=DOID:2355!1.33e-10!1 | |ontology_enrichment_disease=DOID:2355!1.33e-10!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001778!3.43e-30!3;UBERON:0001775!3.43e-30!3;UBERON:0000988!4.28e-29!3;UBERON:0000488!8.12e-23!4;UBERON:0002148!4.90e-20!2;UBERON:0009662!4.90e-20!2;UBERON:0002298!4.53e-19!8;UBERON:0004732!3.41e-18!13;UBERON:0003076!1.34e-15!15;UBERON:0003057!1.34e-15!15;UBERON:0002203!2.03e-15!6;UBERON:0001768!2.03e-15!6;UBERON:0006331!1.09e-13!3;UBERON:0004733!8.42e-13!12;UBERON:0002028!8.42e-13!12;UBERON:0007277!8.42e-13!12;UBERON:0003075!1.61e-11!86;UBERON:0007284!1.61e-11!86;UBERON:0002104!1.70e-11!21;UBERON:0000941!2.79e-11!1;UBERON:0004904!2.79e-11!1;UBERON:0002464!2.79e-11!1;UBERON:0001021!2.79e-11!1;UBERON:0001785!2.79e-11!1;UBERON:0002346!6.12e-11!90;UBERON:0002680!4.19e-10!9;UBERON:0001895!4.19e-10!9;UBERON:0010092!4.19e-10!9;UBERON:0001032!4.84e-10!24;UBERON:0004456!4.84e-10!24;UBERON:0007625!1.20e-08!11;UBERON:0002200!1.20e-08!11;UBERON:0006876!1.20e-08!11;UBERON:0002046!1.37e-08!5;UBERON:0004117!1.37e-08!5;UBERON:0007689!1.37e-08!5;UBERON:0007123!1.37e-08!5;UBERON:0003091!1.37e-08!5;UBERON:0000063!2.02e-08!97;UBERON:0000019!2.18e-08!19;UBERON:0000047!2.18e-08!19;UBERON:0004088!2.18e-08!19;UBERON:0003072!2.18e-08!19;UBERON:0003071!2.18e-08!19;UBERON:0004128!2.18e-08!19;UBERON:0000970!5.63e-08!20;UBERON:0001456!1.33e-07!21;UBERON:0001049!3.05e-07!57;UBERON:0005068!3.05e-07!57;UBERON:0006241!3.05e-07!57;UBERON:0007135!3.05e-07!57;UBERON:0000153!4.33e-07!129;UBERON:0007811!4.33e-07!129;UBERON:0000020!5.96e-07!23;UBERON:0001801!6.84e-07!14;UBERON:0007023!9.49e-07!115 | |ontology_enrichment_uberon=UBERON:0001778!3.43e-30!3;UBERON:0001775!3.43e-30!3;UBERON:0000988!4.28e-29!3;UBERON:0000488!8.12e-23!4;UBERON:0002148!4.90e-20!2;UBERON:0009662!4.90e-20!2;UBERON:0002298!4.53e-19!8;UBERON:0004732!3.41e-18!13;UBERON:0003076!1.34e-15!15;UBERON:0003057!1.34e-15!15;UBERON:0002203!2.03e-15!6;UBERON:0001768!2.03e-15!6;UBERON:0006331!1.09e-13!3;UBERON:0004733!8.42e-13!12;UBERON:0002028!8.42e-13!12;UBERON:0007277!8.42e-13!12;UBERON:0003075!1.61e-11!86;UBERON:0007284!1.61e-11!86;UBERON:0002104!1.70e-11!21;UBERON:0000941!2.79e-11!1;UBERON:0004904!2.79e-11!1;UBERON:0002464!2.79e-11!1;UBERON:0001021!2.79e-11!1;UBERON:0001785!2.79e-11!1;UBERON:0002346!6.12e-11!90;UBERON:0002680!4.19e-10!9;UBERON:0001895!4.19e-10!9;UBERON:0010092!4.19e-10!9;UBERON:0001032!4.84e-10!24;UBERON:0004456!4.84e-10!24;UBERON:0007625!1.20e-08!11;UBERON:0002200!1.20e-08!11;UBERON:0006876!1.20e-08!11;UBERON:0002046!1.37e-08!5;UBERON:0004117!1.37e-08!5;UBERON:0007689!1.37e-08!5;UBERON:0007123!1.37e-08!5;UBERON:0003091!1.37e-08!5;UBERON:0000063!2.02e-08!97;UBERON:0000019!2.18e-08!19;UBERON:0000047!2.18e-08!19;UBERON:0004088!2.18e-08!19;UBERON:0003072!2.18e-08!19;UBERON:0003071!2.18e-08!19;UBERON:0004128!2.18e-08!19;UBERON:0000970!5.63e-08!20;UBERON:0001456!1.33e-07!21;UBERON:0001049!3.05e-07!57;UBERON:0005068!3.05e-07!57;UBERON:0006241!3.05e-07!57;UBERON:0007135!3.05e-07!57;UBERON:0000153!4.33e-07!129;UBERON:0007811!4.33e-07!129;UBERON:0000020!5.96e-07!23;UBERON:0001801!6.84e-07!14;UBERON:0007023!9.49e-07!115 | ||
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|short_description=p@chr12:97856211..97856221,+ | |short_description=p@chr12:97856211..97856221,+ | ||
}} | }} |
Latest revision as of 13:57, 24 July 2015
Short description: | p@chr12:97856211..97856221, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:97856211..97856221, + |
Coexpression cluster: | C1022_Ciliary_Lens_Astrocyte_Neural_Iris_retina_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 8.93e-147 | 3 |
ciliated epithelial cell | 8.93e-147 | 3 |
multi-ciliated epithelial cell | 8.93e-147 | 3 |
non-pigmented ciliary epithelial cell | 8.93e-147 | 3 |
neurecto-epithelial cell | 4.59e-23 | 20 |
columnar/cuboidal epithelial cell | 2.34e-17 | 27 |
ecto-epithelial cell | 5.47e-14 | 34 |
neurectodermal cell | 3.42e-08 | 59 |
ectodermal cell | 6.78e-07 | 72 |