FFCP PHASE1:Hg19::chr6:10585715..10585722,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2651 | |EntrezGene=2651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4204 | |HGNC=4204 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NFS9 | |UniProt=Q8NFS9 | ||
|association_with_transcript=-256bp_to_ENST00000265012_5end | |association_with_transcript=-256bp_to_ENST00000265012_5end | ||
|cluster_id=chr6:10585715..10585722,+ | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_35_at_GCNT2_5end | |description=CAGE_peak_35_at_GCNT2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000764!2.04e-45!2;CL:0000765!2.04e-45!2;CL:0000050!2.04e-45!2;CL:0000038!2.04e-45!2;CL:0000558!2.04e-45!2;CL:0000547!2.04e-45!2;CL:0000549!2.04e-45!2;CL:0000550!2.04e-45!2;CL:0000552!2.04e-45!2 | |ontology_enrichment_celltype=CL:0000764!2.04e-45!2;CL:0000765!2.04e-45!2;CL:0000050!2.04e-45!2;CL:0000038!2.04e-45!2;CL:0000558!2.04e-45!2;CL:0000547!2.04e-45!2;CL:0000549!2.04e-45!2;CL:0000550!2.04e-45!2;CL:0000552!2.04e-45!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;9.38e-99;2!CL:0000558;9.38e-99;2 | |ontology_enrichment_celltype_v019=CL:0000764;9.38e-99;2!CL:0000558;9.38e-99;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,5.68e-99,2;CL:0000765,5.68e-99,2;CL:0000050,5.68e-99,2;CL:0000038,5.68e-99,2;CL:0000558,5.68e-99,2;CL:0000547,5.68e-99,2;CL:0000549,5.68e-99,2;CL:0000550,5.68e-99,2;CL:0000552,5.68e-99,2 | |||
|ontology_enrichment_development_v019=UBERON:0004140;3.99e-50;1!UBERON:0005062;1.13e-13;4!UBERON:0007284;1.13e-13;4!UBERON:0004872;2.18e-08;7 | |ontology_enrichment_development_v019=UBERON:0004140;3.99e-50;1!UBERON:0005062;1.13e-13;4!UBERON:0007284;1.13e-13;4!UBERON:0004872;2.18e-08;7 | ||
|ontology_enrichment_disease=DOID:114!1.91e-44!2;DOID:178!4.10e-23!1;DOID:326!4.10e-23!1;DOID:3978!4.10e-23!1;DOID:3394!4.10e-23!1;DOID:5844!4.10e-23!1;DOID:1287!8.02e-23!4 | |ontology_enrichment_disease=DOID:114!1.91e-44!2;DOID:178!4.10e-23!1;DOID:326!4.10e-23!1;DOID:3978!4.10e-23!1;DOID:3394!4.10e-23!1;DOID:5844!4.10e-23!1;DOID:1287!8.02e-23!4 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002146!2.10e-23!1;UBERON:0005623!2.10e-23!1;UBERON:0007100!1.81e-13!27;UBERON:0002360!3.24e-12!2;UBERON:0000094!3.24e-12!2;UBERON:0007645!3.24e-12!2;UBERON:0007023!4.72e-12!115;UBERON:0003978!1.04e-08!3;UBERON:0009751!1.04e-08!3;UBERON:0000946!1.04e-08!3;UBERON:0002523!1.04e-08!3;UBERON:0005983!1.04e-08!3;UBERON:0002165!1.04e-08!3;UBERON:0002062!1.04e-08!3;UBERON:0007280!1.04e-08!3;UBERON:0002342!3.14e-07!14;UBERON:0005062!3.14e-07!14 | |ontology_enrichment_uberon=UBERON:0002146!2.10e-23!1;UBERON:0005623!2.10e-23!1;UBERON:0007100!1.81e-13!27;UBERON:0002360!3.24e-12!2;UBERON:0000094!3.24e-12!2;UBERON:0007645!3.24e-12!2;UBERON:0007023!4.72e-12!115;UBERON:0003978!1.04e-08!3;UBERON:0009751!1.04e-08!3;UBERON:0000946!1.04e-08!3;UBERON:0002523!1.04e-08!3;UBERON:0005983!1.04e-08!3;UBERON:0002165!1.04e-08!3;UBERON:0002062!1.04e-08!3;UBERON:0007280!1.04e-08!3;UBERON:0002342!3.14e-07!14;UBERON:0005062!3.14e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002146;3.99e-50;1!UBERON:0005623;3.99e-50;1!UBERON:0003978;9.45e-18;3!UBERON:0000946;9.45e-18;3!UBERON:0000948;4.74e-10;22!UBERON:0007100;5.71e-09;25 | |ontology_enrichment_uberon_v019=UBERON:0002146;3.99e-50;1!UBERON:0005623;3.99e-50;1!UBERON:0003978;9.45e-18;3!UBERON:0000946;9.45e-18;3!UBERON:0000948;4.74e-10;22!UBERON:0007100;5.71e-09;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,6.58e-50,1;UBERON:0005623,6.58e-50,1;UBERON:0003978,1.12e-17,3;UBERON:0009751,1.12e-17,3;UBERON:0000946,1.12e-17,3;UBERON:0002523,1.12e-17,3;UBERON:0005983,1.12e-17,3;UBERON:0002165,1.12e-17,3;UBERON:0002062,1.12e-17,3;UBERON:0007280,1.12e-17,3;UBERON:0000948,2.78e-09,24;UBERON:0005498,2.78e-09,24;UBERON:0004140,2.78e-09,24;UBERON:0009881,2.78e-09,24;UBERON:0004141,2.78e-09,24;UBERON:0003084,2.78e-09,24;UBERON:0007005,2.78e-09,24;UBERON:0004139,2.78e-09,24;UBERON:0004291,2.78e-09,24;UBERON:0007100,2.30e-08,27;UBERON:0004797,2.35e-08,7 | |||
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|short_description=p35@GCNT2 | |short_description=p35@GCNT2 | ||
}} | }} |
Latest revision as of 14:20, 19 September 2015
Short description: | p35@GCNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_GCNT2_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -256bp_to_ENST00000265012_5end |
EntrezGene: | GCNT2 |
HGNC: | 4204 |
UniProt: | Q8NFS9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 5.68e-99 | 2 |
erythroblast | 5.68e-99 | 2 |
megakaryocyte-erythroid progenitor cell | 5.68e-99 | 2 |
erythroid progenitor cell | 5.68e-99 | 2 |
reticulocyte | 5.68e-99 | 2 |
proerythroblast | 5.68e-99 | 2 |
basophilic erythroblast | 5.68e-99 | 2 |
polychromatophilic erythroblast | 5.68e-99 | 2 |
orthochromatic erythroblast | 5.68e-99 | 2 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 6.58e-50 | 1 |
semi-lunar valve | 6.58e-50 | 1 |
valve | 1.12e-17 | 3 |
cardiac mesenchyme | 1.12e-17 | 3 |
cardial valve | 1.12e-17 | 3 |
tunica intima | 1.12e-17 | 3 |
heart layer | 1.12e-17 | 3 |
endocardium | 1.12e-17 | 3 |
endocardial cushion | 1.12e-17 | 3 |
presumptive endocardium | 1.12e-17 | 3 |
heart | 2.78e-09 | 24 |
primitive heart tube | 2.78e-09 | 24 |
primary heart field | 2.78e-09 | 24 |
anterior lateral plate mesoderm | 2.78e-09 | 24 |
heart tube | 2.78e-09 | 24 |
heart primordium | 2.78e-09 | 24 |
cardiac mesoderm | 2.78e-09 | 24 |
cardiogenic plate | 2.78e-09 | 24 |
heart rudiment | 2.78e-09 | 24 |
primary circulatory organ | 2.30e-08 | 27 |
blood vessel layer | 2.35e-08 | 7 |