FFCP PHASE1:Hg19::chr8:125152931..125152937,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:125152931..125152937,+ | |||
|description=CAGE_peak_at_chr8:125152931..125152937,+ | |description=CAGE_peak_at_chr8:125152931..125152937,+ | ||
|id=chr8:125152931..125152937,+ | |id=chr8:125152931..125152937,+ | ||
|ontology_enrichment_celltype=CL:0000063!8.64e-07!578 | |ontology_enrichment_celltype=CL:0000063!8.64e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000307;5.17e-25;3!CL:0000946;9.81e-20;1!CL:0000786;9.81e-20;1!CL:0002202;8.16e-19;9!CL:0002632;8.16e-19;9!CL:0002368;3.07e-13;13!CL:0002535;2.72e-10;2!CL:0000322;1.87e-07;3!CL:0002541;2.79e-07;3 | |ontology_enrichment_celltype_v019=CL:0000307;5.17e-25;3!CL:0000946;9.81e-20;1!CL:0000786;9.81e-20;1!CL:0002202;8.16e-19;9!CL:0002632;8.16e-19;9!CL:0002368;3.07e-13;13!CL:0002535;2.72e-10;2!CL:0000322;1.87e-07;3!CL:0002541;2.79e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,5.50e-25,3;CL:0000069,5.50e-25,3;CL:0000307,5.50e-25,3;CL:0000377,5.50e-25,3;CL:0000946,8.95e-20,1;CL:0000786,8.95e-20,1;CL:0000980,8.95e-20,1;CL:0002202,8.67e-19,9;CL:0002632,8.67e-19,9;CL:0002368,3.20e-13,13;CL:0000785,1.43e-10,2;CL:0000955,1.43e-10,2;CL:0000818,1.43e-10,2;CL:0000954,1.43e-10,2;CL:0000816,1.43e-10,2;CL:0002535,3.58e-10,2;CL:0000817,1.82e-07,3;CL:0000322,1.93e-07,3;CL:0002541,3.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;5.17e-25;3!CL:0000954;1.50e-10;2 | |ontology_enrichment_development_v019=CL:0000377;5.17e-25;3!CL:0000954;1.50e-10;2 | ||
|ontology_enrichment_disease=DOID:162!1.10e-24!235;DOID:14566!1.28e-23!239;DOID:0050686!2.60e-17!137;DOID:305!1.27e-15!106;DOID:0050687!7.12e-13!143;DOID:8692!5.85e-08!31;DOID:299!1.84e-07!25;DOID:1749!1.87e-07!14;DOID:2531!4.57e-07!51;DOID:0060083!4.57e-07!51;DOID:1240!4.89e-07!39 | |ontology_enrichment_disease=DOID:162!1.10e-24!235;DOID:14566!1.28e-23!239;DOID:0050686!2.60e-17!137;DOID:305!1.27e-15!106;DOID:0050687!7.12e-13!143;DOID:8692!5.85e-08!31;DOID:299!1.84e-07!25;DOID:1749!1.87e-07!14;DOID:2531!4.57e-07!51;DOID:0060083!4.57e-07!51;DOID:1240!4.89e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:3910;1.50e-10;2 | |ontology_enrichment_disease_v019=DOID:3910;1.50e-10;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,1.57e-10,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007196;1.47e-11;15!UBERON:0001558;1.47e-11;15!UBERON:0003126;2.62e-11;7!UBERON:0001005;2.62e-11;7!UBERON:0004903;1.50e-10;2!UBERON:0002173;1.50e-10;2!UBERON:0002186;1.50e-10;2!UBERON:0006955;2.72e-10;2!UBERON:0004801;2.72e-10;2!UBERON:0004821;1.87e-07;3!UBERON:0007499;1.87e-07;3!UBERON:0003215;1.87e-07;3!UBERON:0010368;1.87e-07;3!UBERON:0009911;1.87e-07;3!UBERON:0002299;1.87e-07;3!UBERON:0006524;1.87e-07;3!UBERON:0008874;1.87e-07;3!UBERON:0002169;1.87e-07;3!UBERON:0004894;1.87e-07;3!UBERON:0003124;2.79e-07;3!UBERON:0000920;2.79e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0007196;1.47e-11;15!UBERON:0001558;1.47e-11;15!UBERON:0003126;2.62e-11;7!UBERON:0001005;2.62e-11;7!UBERON:0004903;1.50e-10;2!UBERON:0002173;1.50e-10;2!UBERON:0002186;1.50e-10;2!UBERON:0006955;2.72e-10;2!UBERON:0004801;2.72e-10;2!UBERON:0004821;1.87e-07;3!UBERON:0007499;1.87e-07;3!UBERON:0003215;1.87e-07;3!UBERON:0010368;1.87e-07;3!UBERON:0009911;1.87e-07;3!UBERON:0002299;1.87e-07;3!UBERON:0006524;1.87e-07;3!UBERON:0008874;1.87e-07;3!UBERON:0002169;1.87e-07;3!UBERON:0004894;1.87e-07;3!UBERON:0003124;2.79e-07;3!UBERON:0000920;2.79e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,1.52e-11,15;UBERON:0001558,1.52e-11,15;UBERON:0003126,2.69e-11,7;UBERON:0001005,2.69e-11,7;UBERON:0004903,1.57e-10,2;UBERON:0002173,1.57e-10,2;UBERON:0002186,1.57e-10,2;UBERON:0006955,3.58e-10,2;UBERON:0004801,3.58e-10,2;UBERON:0004821,1.93e-07,3;UBERON:0003215,1.93e-07,3;UBERON:0010368,1.93e-07,3;UBERON:0009911,1.93e-07,3;UBERON:0002299,1.93e-07,3;UBERON:0006524,1.93e-07,3;UBERON:0008874,1.93e-07,3;UBERON:0002169,1.93e-07,3;UBERON:0004894,1.93e-07,3;UBERON:0000920,3.16e-07,3 | |||
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| ||
|short_description=p@chr8:125152931..125152937,+ | |short_description=p@chr8:125152931..125152937,+ | ||
}} | }} |
Latest revision as of 14:37, 31 July 2015
Short description: | p@chr8:125152931..125152937, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:125152931..125152937, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 5.50e-25 | 3 |
branched duct epithelial cell | 5.50e-25 | 3 |
tracheal epithelial cell | 5.50e-25 | 3 |
tracheoblast | 5.50e-25 | 3 |
antibody secreting cell | 8.95e-20 | 1 |
plasma cell | 8.95e-20 | 1 |
plasmablast | 8.95e-20 | 1 |
epithelial cell of tracheobronchial tree | 8.67e-19 | 9 |
epithelial cell of lower respiratory tract | 8.67e-19 | 9 |
respiratory epithelial cell | 3.20e-13 | 13 |
mature B cell | 1.43e-10 | 2 |
pre-B-II cell | 1.43e-10 | 2 |
transitional stage B cell | 1.43e-10 | 2 |
small pre-B-II cell | 1.43e-10 | 2 |
immature B cell | 1.43e-10 | 2 |
epithelial cell of cervix | 3.58e-10 | 2 |
precursor B cell | 1.82e-07 | 3 |
pneumocyte | 1.93e-07 | 3 |
chorionic membrane mesenchymal stem cell | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 1.52e-11 | 15 |
lower respiratory tract | 1.52e-11 | 15 |
trachea | 2.69e-11 | 7 |
respiratory airway | 2.69e-11 | 7 |
bronchoalveolar duct junction | 1.57e-10 | 2 |
alveolar duct | 1.57e-10 | 2 |
bronchiole | 1.57e-10 | 2 |
uterine epithelium | 3.58e-10 | 2 |
cervix epithelium | 3.58e-10 | 2 |
pulmonary alveolus epithelium | 1.93e-07 | 3 |
alveolus | 1.93e-07 | 3 |
pulmonary lobule | 1.93e-07 | 3 |
lobule | 1.93e-07 | 3 |
alveolus of lung | 1.93e-07 | 3 |
alveolar system | 1.93e-07 | 3 |
pulmonary acinus | 1.93e-07 | 3 |
alveolar sac | 1.93e-07 | 3 |
alveolar wall | 1.93e-07 | 3 |
egg chorion | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.57e-10 | 2 |