FFCP PHASE1:Hg19::chr6:56485258..56485269,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:56485258..56485269,- | |||
|coexpression_cluster_id=C457 | |coexpression_cluster_id=C457 | ||
|description=CAGE_peak_at_chr6:56485258..56485269,- | |description=CAGE_peak_at_chr6:56485258..56485269,- | ||
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|ontology_enrichment_celltype=CL:0002076!2.18e-13!43;CL:0000223!1.96e-11!59;CL:0000066!2.84e-10!254;CL:0002251!3.76e-10!21;CL:0002623!8.74e-08!3 | |ontology_enrichment_celltype=CL:0002076!2.18e-13!43;CL:0000223!1.96e-11!59;CL:0000066!2.84e-10!254;CL:0002251!3.76e-10!21;CL:0002623!8.74e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002623;3.59e-25;3!CL:0002231;4.05e-25;3!CL:0002336;2.97e-19;1!CL:0002261;2.97e-19;1!CL:0002170;2.97e-19;1!CL:0002076;7.80e-18;42!CL:0000622;1.56e-15;5!CL:0002251;8.41e-15;20!CL:0000154;4.13e-13;6!CL:0000240;6.12e-13;6!CL:0000311;6.12e-13;6!CL:0000079;6.12e-13;6!CL:0000237;6.12e-13;6!CL:0000150;4.70e-09;9 | |ontology_enrichment_celltype_v019=CL:0002623;3.59e-25;3!CL:0002231;4.05e-25;3!CL:0002336;2.97e-19;1!CL:0002261;2.97e-19;1!CL:0002170;2.97e-19;1!CL:0002076;7.80e-18;42!CL:0000622;1.56e-15;5!CL:0002251;8.41e-15;20!CL:0000154;4.13e-13;6!CL:0000240;6.12e-13;6!CL:0000311;6.12e-13;6!CL:0000079;6.12e-13;6!CL:0000237;6.12e-13;6!CL:0000150;4.70e-09;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002623,2.34e-25,3;CL:0002231,4.87e-25,3;CL:0002076,7.12e-21,42;CL:0002336,2.25e-19,1;CL:0002261,2.25e-19,1;CL:0002170,2.25e-19,1;CL:0000622,1.21e-15,5;CL:0000223,4.76e-15,58;CL:0002251,6.43e-15,20;CL:0000154,3.34e-13,6;CL:0000240,6.50e-13,6;CL:0000311,6.50e-13,6;CL:0000079,6.50e-13,6;CL:0000237,6.50e-13,6;CL:0000036,6.50e-13,6;CL:0000357,6.50e-13,6;CL:0000114,6.50e-13,6;CL:0000150,4.09e-09,9;CL:0000066,6.20e-08,253 | |||
|ontology_enrichment_development_v019=CL:0000357;6.12e-13;6!CL:0000114;6.12e-13;6!CL:0000223;2.82e-08;58 | |ontology_enrichment_development_v019=CL:0000357;6.12e-13;6!CL:0000114;6.12e-13;6!CL:0000223;2.82e-08;58 | ||
|ontology_enrichment_disease=DOID:1749!9.13e-13!14 | |ontology_enrichment_disease=DOID:1749!9.13e-13!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000161!3.57e-11!35;UBERON:0000166!8.88e-10!21;UBERON:0003102!2.29e-08!95;UBERON:0000165!3.47e-08!28;UBERON:0000930!3.47e-08!28;UBERON:0000033!3.52e-08!123;UBERON:0000153!4.39e-08!129;UBERON:0007811!4.39e-08!129;UBERON:0003729!3.87e-07!5;UBERON:0001004!4.18e-07!72 | |ontology_enrichment_uberon=UBERON:0000161!3.57e-11!35;UBERON:0000166!8.88e-10!21;UBERON:0003102!2.29e-08!95;UBERON:0000165!3.47e-08!28;UBERON:0000930!3.47e-08!28;UBERON:0000033!3.52e-08!123;UBERON:0000153!4.39e-08!129;UBERON:0007811!4.39e-08!129;UBERON:0003729!3.87e-07!5;UBERON:0001004!4.18e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0001044;4.13e-13;6!UBERON:0003293;4.13e-13;6!UBERON:0003294;4.13e-13;6!UBERON:0010047;4.13e-13;6!UBERON:0003408;4.13e-13;6!UBERON:0000167;4.13e-13;6!UBERON:0000165;1.13e-10;28!UBERON:0000161;3.24e-09;19!UBERON:0000166;3.24e-09;19!UBERON:0007811;1.29e-07;52!UBERON:0002367;1.49e-07;11!UBERON:0010147;1.49e-07;11!UBERON:0003937;5.39e-07;12!UBERON:0005399;5.39e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0001044;4.13e-13;6!UBERON:0003293;4.13e-13;6!UBERON:0003294;4.13e-13;6!UBERON:0010047;4.13e-13;6!UBERON:0003408;4.13e-13;6!UBERON:0000167;4.13e-13;6!UBERON:0000165;1.13e-10;28!UBERON:0000161;3.24e-09;19!UBERON:0000166;3.24e-09;19!UBERON:0007811;1.29e-07;52!UBERON:0002367;1.49e-07;11!UBERON:0010147;1.49e-07;11!UBERON:0003937;5.39e-07;12!UBERON:0005399;5.39e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,3.34e-13,6;UBERON:0003293,3.34e-13,6;UBERON:0003294,3.34e-13,6;UBERON:0010047,3.34e-13,6;UBERON:0000167,3.34e-13,6;UBERON:0000161,9.93e-13,36;UBERON:0000165,2.13e-10,29;UBERON:0000930,2.13e-10,29;UBERON:0000076,6.06e-10,8;UBERON:0001444,2.40e-09,49;UBERON:0003102,1.23e-08,99;UBERON:0003408,2.72e-08,10;UBERON:0000033,3.50e-08,56;UBERON:0000166,4.23e-08,22;UBERON:0002530,8.99e-08,59;UBERON:0002367,1.56e-07,11;UBERON:0010147,1.56e-07,11;UBERON:0009846,1.56e-07,11;UBERON:0003353,1.56e-07,11;UBERON:0004902,1.56e-07,11;UBERON:0003820,1.56e-07,11;UBERON:0009847,1.56e-07,11;UBERON:0000153,2.17e-07,62;UBERON:0007811,2.17e-07,62;UBERON:0003937,5.64e-07,12;UBERON:0005399,5.64e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0.772921620136887,0,0.168776332241266,0.0974370051611986,0.504867548488229,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878002283269004,0,1.3068766413512,1.75918045801206,0.325808305310325,0,1.44331342025273,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0.503946384596579,0.567100388969546,0.985143749731331,1.45316969256981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40354529212299,3.31491560169227,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0.991709492165869,0.576570202095319,0.638063562472921,2.73126008309985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.251932747854276,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0.416024019039416,0,0.0979923974143777,0.174118413160805,0,0.343972064943233,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0.335434687599266,0,0,0,0.35857467866569,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0.830091809617385,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0.300515217994437,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0.172214979660816,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,1.83428598521679,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,1.86494547746733,4.4386804044427,0.691259661814092,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0.940634592723046,0,0,0,0,0,0,0,0,0.0999411559249289,0.535661815816973,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.124149428591716,0.112131862580613,0,0,0.435433495793923,0,0,0.0717222053926763,0,0.162806537221949,0,0,0.0898252021065869,0,0,0,0,0,0.320568492303233 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0.772921620136887,0,0.168776332241266,0.0974370051611986,0.504867548488229,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878002283269004,0,1.3068766413512,1.75918045801206,0.325808305310325,0,1.44331342025273,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0.503946384596579,0.567100388969546,0.985143749731331,1.45316969256981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40354529212299,3.31491560169227,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0.991709492165869,0.576570202095319,0.638063562472921,2.73126008309985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.251932747854276,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0.416024019039416,0,0.0979923974143777,0.174118413160805,0,0.343972064943233,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0.335434687599266,0,0,0,0.35857467866569,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0.830091809617385,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0.300515217994437,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0.172214979660816,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,1.83428598521679,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,1.86494547746733,4.4386804044427,0.691259661814092,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0.940634592723046,0,0,0,0,0,0,0,0,0.0999411559249289,0.535661815816973,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.124149428591716,0.112131862580613,0,0,0.435433495793923,0,0,0.0717222053926763,0,0.162806537221949,0,0,0.0898252021065869,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr6:56485258..56485269,- | |short_description=p@chr6:56485258..56485269,- | ||
}} | }} |
Latest revision as of 02:30, 31 July 2015
Short description: | p@chr6:56485258..56485269, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:56485258..56485269, - |
Coexpression cluster: | C457_salivary_Prostate_oral_Small_Keratinocyte_Urothelial_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 2.34e-25 | 3 |
epithelial cell of prostate | 4.87e-25 | 3 |
endo-epithelial cell | 7.12e-21 | 42 |
buccal mucosa cell | 2.25e-19 | 1 |
endothelial cell of viscerocranial mucosa | 2.25e-19 | 1 |
keratinized cell of the oral mucosa | 2.25e-19 | 1 |
acinar cell | 1.21e-15 | 5 |
endodermal cell | 4.76e-15 | 58 |
epithelial cell of alimentary canal | 6.43e-15 | 20 |
protein secreting cell | 3.34e-13 | 6 |
stratified squamous epithelial cell | 6.50e-13 | 6 |
keratin accumulating cell | 6.50e-13 | 6 |
stratified epithelial cell | 6.50e-13 | 6 |
keratinizing barrier epithelial cell | 6.50e-13 | 6 |
epithelial fate stem cell | 6.50e-13 | 6 |
stratified epithelial stem cell | 6.50e-13 | 6 |
surface ectodermal cell | 6.50e-13 | 6 |
glandular epithelial cell | 4.09e-09 | 9 |
epithelial cell | 6.20e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 3.34e-13 | 6 |
gland of oral region | 3.34e-13 | 6 |
gland of foregut | 3.34e-13 | 6 |
oral gland | 3.34e-13 | 6 |
oral cavity | 3.34e-13 | 6 |
orifice | 9.93e-13 | 36 |
mouth | 2.13e-10 | 29 |
stomodeum | 2.13e-10 | 29 |
external ectoderm | 6.06e-10 | 8 |
subdivision of head | 2.40e-09 | 49 |
surface structure | 1.23e-08 | 99 |
gland of gut | 2.72e-08 | 10 |
head | 3.50e-08 | 56 |
oral opening | 4.23e-08 | 22 |
gland | 8.99e-08 | 59 |
prostate gland | 1.56e-07 | 11 |
male accessory sex gland | 1.56e-07 | 11 |
embryonic cloacal epithelium | 1.56e-07 | 11 |
epithelium of hindgut | 1.56e-07 | 11 |
urogenital sinus epithelium | 1.56e-07 | 11 |
prostate bud | 1.56e-07 | 11 |
prostate field | 1.56e-07 | 11 |
anterior region of body | 2.17e-07 | 62 |
craniocervical region | 2.17e-07 | 62 |
sex gland | 5.64e-07 | 12 |
male reproductive gland | 5.64e-07 | 12 |