FFCP PHASE1:Hg19::chr22:36685324..36685335,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:36685324..36685335,-
|short_description=p@chr22:36685324..36685335,-
|description=CAGE_peak_at_chr22:36685324..36685335,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr22:36685324..36685335,- | |||
|coexpression_cluster_id=C634 | |||
|description=CAGE_peak_at_chr22:36685324..36685335,- | |||
|id=chr22:36685324..36685335,- | |||
|ontology_enrichment_celltype=CL:0000144!1.99e-12!625;CL:0000003!4.12e-12!722;CL:0002371!1.29e-10!591;CL:0000548!3.52e-10!679;CL:0000004!3.52e-10!679;CL:0000255!3.52e-10!679;CL:0000012!1.88e-09!682;CL:0000220!5.13e-08!246;CL:0002321!1.05e-07!248;CL:0000063!1.17e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.14e-08;15!CL:1000497;4.20e-08;17!CL:0002518;4.20e-08;17!CL:0000077;6.60e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,2.27e-08,15;CL:1000497,6.59e-08,17;CL:0002518,6.59e-08,17;CL:1000746,6.20e-07,7;CL:1000612,6.20e-07,7;CL:0000077,8.40e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004876!1.76e-07!20;UBERON:0003064!4.63e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.14e-08;15!UBERON:0004819;2.14e-08;15!UBERON:0001285;2.14e-08;15!UBERON:0007684;2.14e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004876,1.33e-08,11;UBERON:0004211,2.27e-08,15;UBERON:0009773,2.27e-08,15;UBERON:0001231,2.27e-08,15;UBERON:0001285,2.27e-08,15;UBERON:0007684,2.27e-08,15;UBERON:0004208,2.27e-08,15;UBERON:0006555,1.31e-07,16;UBERON:0004819,1.31e-07,16;UBERON:0010532,6.20e-07,7;UBERON:0000074,6.20e-07,7;UBERON:0001229,6.20e-07,7;UBERON:0001230,6.20e-07,7;UBERON:0003220,6.20e-07,7;UBERON:0005749,6.20e-07,7;UBERON:0004199,6.20e-07,7;UBERON:0004209,6.20e-07,7;UBERON:0004198,6.20e-07,7 | |||
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| ||
|short_description=p@chr22:36685324..36685335,- | |||
}} | }} |
Latest revision as of 20:44, 28 July 2015
Short description: | p@chr22:36685324..36685335, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:36685324..36685335, - |
Coexpression cluster: | C634_Neutrophils_mesothelioma_Olfactory_Hair_Prostate_Alveolar_Lens |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 2.27e-08 | 15 |
kidney cell | 6.59e-08 | 17 |
kidney epithelial cell | 6.59e-08 | 17 |
glomerular cell | 6.20e-07 | 7 |
kidney corpuscule cell | 6.20e-07 | 7 |
mesothelial cell | 8.40e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
urogenital ridge | 1.33e-08 | 11 |
nephron epithelium | 2.27e-08 | 15 |
renal tubule | 2.27e-08 | 15 |
nephron tubule | 2.27e-08 | 15 |
nephron | 2.27e-08 | 15 |
uriniferous tubule | 2.27e-08 | 15 |
nephrogenic mesenchyme | 2.27e-08 | 15 |
excretory tube | 1.31e-07 | 16 |
kidney epithelium | 1.31e-07 | 16 |
primitive nephron | 6.20e-07 | 7 |
renal glomerulus | 6.20e-07 | 7 |
renal corpuscle | 6.20e-07 | 7 |
glomerular capsule | 6.20e-07 | 7 |
metanephric mesenchyme | 6.20e-07 | 7 |
glomerular tuft | 6.20e-07 | 7 |
S-shaped body | 6.20e-07 | 7 |
renal vesicle | 6.20e-07 | 7 |
comma-shaped body | 6.20e-07 | 7 |