FFCP PHASE1:Hg19::chr17:4643161..4643241,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58191 | |EntrezGene=58191 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16642 | |HGNC=16642 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2A7 | |UniProt=Q9H2A7 | ||
|association_with_transcript=0bp_to_ENST00000293778,NM_001100812,NM_022059,uc002fyr.3,uc002fys.3_5end | |association_with_transcript=0bp_to_ENST00000293778,NM_001100812,NM_022059,uc002fyr.3,uc002fys.3_5end | ||
|cluster_id=chr17:4643161..4643241,- | |||
|description=CAGE_peak_1_at_CXCL16_5end | |description=CAGE_peak_1_at_CXCL16_5end | ||
|id=chr17:4643161..4643241,- | |id=chr17:4643161..4643241,- | ||
|ontology_enrichment_celltype=CL:0000766!4.69e-24!76;CL:0002057!1.26e-22!42;CL:0000860!2.51e-21!45;CL:0000557!3.84e-20!71;CL:0002009!1.01e-18!65;CL:0000839!2.39e-18!70;CL:0002194!1.43e-17!63;CL:0000576!1.43e-17!63;CL:0000040!1.43e-17!63;CL:0000559!1.43e-17!63;CL:0000066!1.28e-16!254;CL:0000223!1.27e-08!59;CL:0000738!3.97e-08!140;CL:0000763!5.26e-07!112;CL:0000049!5.26e-07!112 | |ontology_enrichment_celltype=CL:0000766!4.69e-24!76;CL:0002057!1.26e-22!42;CL:0000860!2.51e-21!45;CL:0000557!3.84e-20!71;CL:0002009!1.01e-18!65;CL:0000839!2.39e-18!70;CL:0002194!1.43e-17!63;CL:0000576!1.43e-17!63;CL:0000040!1.43e-17!63;CL:0000559!1.43e-17!63;CL:0000066!1.28e-16!254;CL:0000223!1.27e-08!59;CL:0000738!3.97e-08!140;CL:0000763!5.26e-07!112;CL:0000049!5.26e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.62e-18;33!CL:0002057;2.62e-18;33!CL:0000473;2.01e-17;39!CL:0000234;2.01e-17;39!CL:0000576;1.05e-13;48!CL:0000766;7.67e-13;69 | |ontology_enrichment_celltype_v019=CL:0000860;2.62e-18;33!CL:0002057;2.62e-18;33!CL:0000473;2.01e-17;39!CL:0000234;2.01e-17;39!CL:0000576;1.05e-13;48!CL:0000766;7.67e-13;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.96e-26,72;CL:0000473,9.99e-26,48;CL:0000234,9.99e-26,48;CL:0000860,2.57e-23,42;CL:0002057,2.57e-23,42;CL:0000557,3.84e-22,67;CL:0002009,1.65e-20,61;CL:0000839,4.90e-20,66;CL:0002194,2.80e-19,59;CL:0000576,2.80e-19,59;CL:0000040,2.80e-19,59;CL:0000559,2.80e-19,59;CL:0000066,3.86e-17,253;CL:0000763,1.86e-09,108;CL:0000049,1.86e-09,108;CL:0000223,2.13e-09,58;CL:0000738,3.99e-09,136;CL:0002076,3.58e-07,42 | |||
|ontology_enrichment_development_v019=CL:0002057;4.02e-17;42 | |ontology_enrichment_development_v019=CL:0002057;4.02e-17;42 | ||
|ontology_enrichment_disease=DOID:305!7.92e-09!106 | |ontology_enrichment_disease=DOID:305!7.92e-09!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,5.44e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0002193!9.92e-18!112;UBERON:0002390!1.64e-17!102;UBERON:0003061!1.64e-17!102;UBERON:0002405!1.66e-16!115;UBERON:0000062!3.07e-16!511;UBERON:0002371!6.74e-16!80;UBERON:0001474!4.09e-14!86;UBERON:0000480!6.71e-14!626;UBERON:0000467!6.84e-14!625;UBERON:0000922!3.52e-13!612;UBERON:0002050!5.29e-13!605;UBERON:0005423!5.29e-13!605;UBERON:0000923!6.22e-13!604;UBERON:0005291!6.22e-13!604;UBERON:0006598!6.22e-13!604;UBERON:0002532!6.22e-13!604;UBERON:0000468!5.18e-12!659;UBERON:0004765!1.08e-11!101;UBERON:0001434!1.08e-11!101;UBERON:0007023!2.10e-11!115;UBERON:0004119!1.70e-10!169;UBERON:0000925!1.70e-10!169;UBERON:0006595!1.70e-10!169;UBERON:0000926!1.83e-10!448;UBERON:0004120!1.83e-10!448;UBERON:0006603!1.83e-10!448;UBERON:0004921!4.71e-09!129;UBERON:0004185!4.71e-09!129;UBERON:0001007!4.86e-09!155;UBERON:0001555!4.86e-09!155;UBERON:0007026!4.86e-09!155;UBERON:0005177!5.50e-09!107;UBERON:0000077!9.56e-09!130;UBERON:0001041!9.81e-08!98;UBERON:0000466!3.02e-07!126;UBERON:0003081!3.04e-07!216;UBERON:0005172!3.57e-07!55;UBERON:0005173!3.57e-07!55 | |ontology_enrichment_uberon=UBERON:0002193!9.92e-18!112;UBERON:0002390!1.64e-17!102;UBERON:0003061!1.64e-17!102;UBERON:0002405!1.66e-16!115;UBERON:0000062!3.07e-16!511;UBERON:0002371!6.74e-16!80;UBERON:0001474!4.09e-14!86;UBERON:0000480!6.71e-14!626;UBERON:0000467!6.84e-14!625;UBERON:0000922!3.52e-13!612;UBERON:0002050!5.29e-13!605;UBERON:0005423!5.29e-13!605;UBERON:0000923!6.22e-13!604;UBERON:0005291!6.22e-13!604;UBERON:0006598!6.22e-13!604;UBERON:0002532!6.22e-13!604;UBERON:0000468!5.18e-12!659;UBERON:0004765!1.08e-11!101;UBERON:0001434!1.08e-11!101;UBERON:0007023!2.10e-11!115;UBERON:0004119!1.70e-10!169;UBERON:0000925!1.70e-10!169;UBERON:0006595!1.70e-10!169;UBERON:0000926!1.83e-10!448;UBERON:0004120!1.83e-10!448;UBERON:0006603!1.83e-10!448;UBERON:0004921!4.71e-09!129;UBERON:0004185!4.71e-09!129;UBERON:0001007!4.86e-09!155;UBERON:0001555!4.86e-09!155;UBERON:0007026!4.86e-09!155;UBERON:0005177!5.50e-09!107;UBERON:0000077!9.56e-09!130;UBERON:0001041!9.81e-08!98;UBERON:0000466!3.02e-07!126;UBERON:0003081!3.04e-07!216;UBERON:0005172!3.57e-07!55;UBERON:0005173!3.57e-07!55 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p1@CXCL16 | |short_description=p1@CXCL16 | ||
}} | }} |
Latest revision as of 06:24, 25 September 2015
Short description: | p1@CXCL16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CXCL16_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000293778, NM_001100812, NM_022059, uc002fyr.3, uc002fys.3_5end |
EntrezGene: | CXCL16 |
HGNC: | 16642 |
UniProt: | Q9H2A7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.96e-26 | 72 |
defensive cell | 9.99e-26 | 48 |
phagocyte | 9.99e-26 | 48 |
classical monocyte | 2.57e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.57e-23 | 42 |
granulocyte monocyte progenitor cell | 3.84e-22 | 67 |
macrophage dendritic cell progenitor | 1.65e-20 | 61 |
myeloid lineage restricted progenitor cell | 4.90e-20 | 66 |
monopoietic cell | 2.80e-19 | 59 |
monocyte | 2.80e-19 | 59 |
monoblast | 2.80e-19 | 59 |
promonocyte | 2.80e-19 | 59 |
epithelial cell | 3.86e-17 | 253 |
myeloid cell | 1.86e-09 | 108 |
common myeloid progenitor | 1.86e-09 | 108 |
endodermal cell | 2.13e-09 | 58 |
leukocyte | 3.99e-09 | 136 |
endo-epithelial cell | 3.58e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.19e-19 | 108 |
hematopoietic system | 3.09e-19 | 98 |
blood island | 3.09e-19 | 98 |
bone marrow | 1.34e-17 | 76 |
immune system | 2.22e-16 | 93 |
bone element | 9.61e-16 | 82 |
skeletal element | 4.97e-14 | 90 |
adult organism | 1.15e-11 | 114 |
skeletal system | 1.36e-11 | 100 |
embryo | 4.06e-11 | 592 |
developing anatomical structure | 4.80e-11 | 581 |
trunk region element | 5.00e-10 | 101 |
endoderm-derived structure | 5.27e-10 | 160 |
endoderm | 5.27e-10 | 160 |
presumptive endoderm | 5.27e-10 | 160 |
subdivision of digestive tract | 2.62e-09 | 118 |
digestive system | 4.62e-09 | 145 |
digestive tract | 4.62e-09 | 145 |
primitive gut | 4.62e-09 | 145 |
foregut | 1.02e-08 | 87 |
embryonic structure | 2.54e-08 | 564 |
abdomen element | 8.19e-08 | 54 |
abdominal segment element | 8.19e-08 | 54 |
germ layer | 8.57e-08 | 560 |
germ layer / neural crest | 8.57e-08 | 560 |
embryonic tissue | 8.57e-08 | 560 |
presumptive structure | 8.57e-08 | 560 |
germ layer / neural crest derived structure | 8.57e-08 | 560 |
epiblast (generic) | 8.57e-08 | 560 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.44e-09 | 106 |