FFCP PHASE1:Hg19::chr17:33396527..33396551,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=117584 | |EntrezGene=117584 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=24821 | |HGNC=24821 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010cti.1_5end | |association_with_transcript=0bp_to_uc010cti.1_5end | ||
|cluster_id=chr17:33396527..33396551,- | |||
|coexpression_cluster_id=C507 | |coexpression_cluster_id=C507 | ||
|description=CAGE_peak_7_at_RFFL_5end | |description=CAGE_peak_7_at_RFFL_5end | ||
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|ontology_enrichment_celltype=CL:0002057!1.70e-10!42;CL:0000860!1.68e-09!45 | |ontology_enrichment_celltype=CL:0002057!1.70e-10!42;CL:0000860!1.68e-09!45 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.90e-09;24 | |ontology_enrichment_celltype_v019=CL:0000945;1.90e-09;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.71e-09,24;CL:0000826,1.71e-09,24;CL:0002087,2.30e-09,115;CL:0002031,6.75e-09,120;CL:0000838,5.73e-08,52;CL:0000542,8.37e-08,53;CL:0000051,8.37e-08,53;CL:0000738,1.25e-07,136 | |||
|ontology_enrichment_development_v019=UBERON:0006222;2.28e-10;1!UBERON:0005425;2.28e-10;1 | |ontology_enrichment_development_v019=UBERON:0006222;2.28e-10;1!UBERON:0005425;2.28e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4960;9.36e-11;1!DOID:0070004;9.36e-11;1 | |ontology_enrichment_disease_v019=DOID:4960;9.36e-11;1!DOID:0070004;9.36e-11;1 | ||
|ontology_enrichment_disease_v019_2=DOID:4960,8.95e-11,1;DOID:0070004,8.95e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.65e-22!57;UBERON:0005068!8.65e-22!57;UBERON:0006241!8.65e-22!57;UBERON:0007135!8.65e-22!57;UBERON:0002616!2.35e-17!59;UBERON:0003075!4.48e-16!86;UBERON:0007284!4.48e-16!86;UBERON:0001017!4.62e-16!82;UBERON:0002346!5.71e-15!90;UBERON:0005743!6.28e-15!86;UBERON:0000955!9.36e-15!69;UBERON:0006238!9.36e-15!69;UBERON:0002780!5.96e-14!41;UBERON:0001890!5.96e-14!41;UBERON:0006240!5.96e-14!41;UBERON:0000073!6.59e-14!94;UBERON:0001016!6.59e-14!94;UBERON:0001893!7.43e-14!34;UBERON:0002020!8.36e-14!34;UBERON:0003528!8.36e-14!34;UBERON:0003080!1.68e-13!42;UBERON:0002791!8.55e-13!33;UBERON:0002298!1.38e-12!8;UBERON:0001869!3.20e-11!32;UBERON:0003056!8.71e-11!61;UBERON:0001950!1.01e-10!20;UBERON:0003076!4.47e-10!15;UBERON:0003057!4.47e-10!15;UBERON:0001872!5.54e-10!5;UBERON:0002619!1.49e-09!22;UBERON:0004732!2.00e-09!13;UBERON:0007023!2.10e-09!115;UBERON:0000033!1.93e-08!123;UBERON:0000153!2.53e-08!129;UBERON:0007811!2.53e-08!129;UBERON:0000956!3.82e-08!25;UBERON:0000203!3.82e-08!25;UBERON:0002308!6.70e-08!9;UBERON:0000125!6.70e-08!9;UBERON:0004733!8.24e-08!12;UBERON:0002028!8.24e-08!12;UBERON:0007277!8.24e-08!12;UBERON:0001896!1.19e-07!3;UBERON:0005290!1.19e-07!3;UBERON:0010096!1.19e-07!3;UBERON:0006331!5.82e-07!3;UBERON:0002371!6.06e-07!80 | |ontology_enrichment_uberon=UBERON:0001049!8.65e-22!57;UBERON:0005068!8.65e-22!57;UBERON:0006241!8.65e-22!57;UBERON:0007135!8.65e-22!57;UBERON:0002616!2.35e-17!59;UBERON:0003075!4.48e-16!86;UBERON:0007284!4.48e-16!86;UBERON:0001017!4.62e-16!82;UBERON:0002346!5.71e-15!90;UBERON:0005743!6.28e-15!86;UBERON:0000955!9.36e-15!69;UBERON:0006238!9.36e-15!69;UBERON:0002780!5.96e-14!41;UBERON:0001890!5.96e-14!41;UBERON:0006240!5.96e-14!41;UBERON:0000073!6.59e-14!94;UBERON:0001016!6.59e-14!94;UBERON:0001893!7.43e-14!34;UBERON:0002020!8.36e-14!34;UBERON:0003528!8.36e-14!34;UBERON:0003080!1.68e-13!42;UBERON:0002791!8.55e-13!33;UBERON:0002298!1.38e-12!8;UBERON:0001869!3.20e-11!32;UBERON:0003056!8.71e-11!61;UBERON:0001950!1.01e-10!20;UBERON:0003076!4.47e-10!15;UBERON:0003057!4.47e-10!15;UBERON:0001872!5.54e-10!5;UBERON:0002619!1.49e-09!22;UBERON:0004732!2.00e-09!13;UBERON:0007023!2.10e-09!115;UBERON:0000033!1.93e-08!123;UBERON:0000153!2.53e-08!129;UBERON:0007811!2.53e-08!129;UBERON:0000956!3.82e-08!25;UBERON:0000203!3.82e-08!25;UBERON:0002308!6.70e-08!9;UBERON:0000125!6.70e-08!9;UBERON:0004733!8.24e-08!12;UBERON:0002028!8.24e-08!12;UBERON:0007277!8.24e-08!12;UBERON:0001896!1.19e-07!3;UBERON:0005290!1.19e-07!3;UBERON:0010096!1.19e-07!3;UBERON:0006331!5.82e-07!3;UBERON:0002371!6.06e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0005162;5.42e-19;2!UBERON:0000122;5.42e-19;2!UBERON:0001896;5.46e-13;3!UBERON:0005290;5.46e-13;3!UBERON:0002336;2.28e-10;1!UBERON:0000941;2.28e-10;1!UBERON:0001785;2.28e-10;1!UBERON:0002464;2.28e-10;1!UBERON:0004904;2.28e-10;1!UBERON:0011215;2.28e-10;1!UBERON:0001018;2.28e-10;1!UBERON:0001021;2.28e-10;1!UBERON:0002473;2.28e-10;1!UBERON:0005340;2.28e-10;1!UBERON:0003544;2.28e-10;1!UBERON:0005970;2.28e-10;1!UBERON:0002316;2.28e-10;1!UBERON:0001020;2.28e-10;1!UBERON:0002437;2.28e-10;1!UBERON:0002298;6.28e-07;6!UBERON:0004732;8.70e-07;13 | |ontology_enrichment_uberon_v019=UBERON:0005162;5.42e-19;2!UBERON:0000122;5.42e-19;2!UBERON:0001896;5.46e-13;3!UBERON:0005290;5.46e-13;3!UBERON:0002336;2.28e-10;1!UBERON:0000941;2.28e-10;1!UBERON:0001785;2.28e-10;1!UBERON:0002464;2.28e-10;1!UBERON:0004904;2.28e-10;1!UBERON:0011215;2.28e-10;1!UBERON:0001018;2.28e-10;1!UBERON:0001021;2.28e-10;1!UBERON:0002473;2.28e-10;1!UBERON:0005340;2.28e-10;1!UBERON:0003544;2.28e-10;1!UBERON:0005970;2.28e-10;1!UBERON:0002316;2.28e-10;1!UBERON:0001020;2.28e-10;1!UBERON:0002437;2.28e-10;1!UBERON:0002298;6.28e-07;6!UBERON:0004732;8.70e-07;13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,3.13e-19,2;UBERON:0000122,3.13e-19,2;UBERON:0001896,8.87e-13,3;UBERON:0005290,8.87e-13,3;UBERON:0010096,8.87e-13,3;UBERON:0002336,1.57e-10,1;UBERON:0011215,1.57e-10,1;UBERON:0001018,1.57e-10,1;UBERON:0002473,1.57e-10,1;UBERON:0005340,1.57e-10,1;UBERON:0003544,1.57e-10,1;UBERON:0005970,1.57e-10,1;UBERON:0002316,1.57e-10,1;UBERON:0001020,1.57e-10,1;UBERON:0002437,1.57e-10,1;UBERON:0000941,1.89e-10,1;UBERON:0001785,1.89e-10,1;UBERON:0002464,1.89e-10,1;UBERON:0004904,1.89e-10,1;UBERON:0001021,1.89e-10,1;UBERON:0003902,1.89e-10,1;UBERON:0005425,1.89e-10,1;UBERON:0002298,7.98e-07,6;UBERON:0004732,9.82e-07,13 | |||
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| ||
|short_description=p7@RFFL | |short_description=p7@RFFL | ||
}} | }} |
Latest revision as of 14:17, 19 September 2015
Short description: | p7@RFFL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RFFL_5end |
Coexpression cluster: | C507_splenic_hairy_b_cord_B_xeroderma_mycosis |
Association with transcript: | 0bp_to_uc010cti.1_5end |
EntrezGene: | RFFL |
HGNC: | 24821 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.71e-09 | 24 |
pro-B cell | 1.71e-09 | 24 |
nongranular leukocyte | 2.30e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 6.75e-09 | 120 |
lymphoid lineage restricted progenitor cell | 5.73e-08 | 52 |
lymphocyte | 8.37e-08 | 53 |
common lymphoid progenitor | 8.37e-08 | 53 |
leukocyte | 1.25e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 3.13e-19 | 2 |
neuron projection bundle | 3.13e-19 | 2 |
medulla oblongata | 8.87e-13 | 3 |
myelencephalon | 8.87e-13 | 3 |
future myelencephalon | 8.87e-13 | 3 |
corpus callosum | 1.57e-10 | 1 |
central nervous system cell part cluster | 1.57e-10 | 1 |
axon tract | 1.57e-10 | 1 |
intercerebral commissure | 1.57e-10 | 1 |
dorsal telencephalic commissure | 1.57e-10 | 1 |
brain white matter | 1.57e-10 | 1 |
brain commissure | 1.57e-10 | 1 |
white matter | 1.57e-10 | 1 |
nervous system commissure | 1.57e-10 | 1 |
cerebral hemisphere white matter | 1.57e-10 | 1 |
cranial nerve II | 1.89e-10 | 1 |
cranial nerve | 1.89e-10 | 1 |
nerve trunk | 1.89e-10 | 1 |
nerve connecting eye with brain | 1.89e-10 | 1 |
nerve | 1.89e-10 | 1 |
retinal neural layer | 1.89e-10 | 1 |
presumptive neural retina | 1.89e-10 | 1 |
brainstem | 7.98e-07 | 6 |
segmental subdivision of nervous system | 9.82e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 8.95e-11 | 1 |
myeloma | 8.95e-11 | 1 |