FFCP PHASE1:Hg19::chr13:67804445..67804475,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5101 | |EntrezGene=5101 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8661 | |HGNC=8661 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VT82,Q9HC56 | |UniProt=Q5VT82,Q9HC56 | ||
|association_with_transcript=0bp_to_ENST00000377861,ENST00000456367,ENST00000544246,NM_020403,NM_203487,uc001vik.2,uc001vil.2,uc001vin.3,uc010thl.1_5end | |association_with_transcript=0bp_to_ENST00000377861,ENST00000456367,ENST00000544246,NM_020403,NM_203487,uc001vik.2,uc001vil.2,uc001vin.3,uc010thl.1_5end | ||
|cluster_id=chr13:67804445..67804475,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_1_at_PCDH9_5end | |description=CAGE_peak_1_at_PCDH9_5end | ||
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|ontology_enrichment_celltype=CL:0000236!1.01e-07!14 | |ontology_enrichment_celltype=CL:0000236!1.01e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.18e-09;13!CL:0000136;8.18e-07;13 | |ontology_enrichment_celltype_v019=CL:0000236;1.18e-09;13!CL:0000136;8.18e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.06e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.32e-09;82 | |ontology_enrichment_development_v019=UBERON:0006601;6.32e-09;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.11e-32!57;UBERON:0005068!8.11e-32!57;UBERON:0006241!8.11e-32!57;UBERON:0007135!8.11e-32!57;UBERON:0002616!1.42e-31!59;UBERON:0001017!1.55e-31!82;UBERON:0003075!3.80e-30!86;UBERON:0007284!3.80e-30!86;UBERON:0002346!1.17e-29!90;UBERON:0000073!1.63e-29!94;UBERON:0001016!1.63e-29!94;UBERON:0000955!1.65e-29!69;UBERON:0006238!1.65e-29!69;UBERON:0005743!2.59e-29!86;UBERON:0002780!7.57e-25!41;UBERON:0001890!7.57e-25!41;UBERON:0006240!7.57e-25!41;UBERON:0003080!7.59e-25!42;UBERON:0007023!1.16e-23!115;UBERON:0000924!2.61e-23!173;UBERON:0006601!2.61e-23!173;UBERON:0004121!2.90e-23!169;UBERON:0002020!3.43e-22!34;UBERON:0003528!3.43e-22!34;UBERON:0001893!3.45e-22!34;UBERON:0002791!1.76e-21!33;UBERON:0003056!9.75e-21!61;UBERON:0001869!1.09e-20!32;UBERON:0000033!5.73e-20!123;UBERON:0000153!7.60e-20!129;UBERON:0007811!7.60e-20!129;UBERON:0000956!6.28e-16!25;UBERON:0000203!6.28e-16!25;UBERON:0002619!1.08e-14!22;UBERON:0001950!2.00e-13!20;UBERON:0000475!4.13e-10!365;UBERON:0000483!2.38e-09!309;UBERON:0000025!4.40e-09!194;UBERON:0000119!5.45e-09!312;UBERON:0000477!1.39e-08!286;UBERON:0003076!4.17e-08!15;UBERON:0003057!4.17e-08!15;UBERON:0002308!9.14e-08!9;UBERON:0000125!9.14e-08!9;UBERON:0002420!1.01e-07!9;UBERON:0007245!1.01e-07!9;UBERON:0010009!1.01e-07!9;UBERON:0010011!1.01e-07!9;UBERON:0000454!1.01e-07!9;UBERON:0000481!3.55e-07!347;UBERON:0000064!7.93e-07!219;UBERON:0004111!8.03e-07!241;UBERON:0004732!8.78e-07!13 | |ontology_enrichment_uberon=UBERON:0001049!8.11e-32!57;UBERON:0005068!8.11e-32!57;UBERON:0006241!8.11e-32!57;UBERON:0007135!8.11e-32!57;UBERON:0002616!1.42e-31!59;UBERON:0001017!1.55e-31!82;UBERON:0003075!3.80e-30!86;UBERON:0007284!3.80e-30!86;UBERON:0002346!1.17e-29!90;UBERON:0000073!1.63e-29!94;UBERON:0001016!1.63e-29!94;UBERON:0000955!1.65e-29!69;UBERON:0006238!1.65e-29!69;UBERON:0005743!2.59e-29!86;UBERON:0002780!7.57e-25!41;UBERON:0001890!7.57e-25!41;UBERON:0006240!7.57e-25!41;UBERON:0003080!7.59e-25!42;UBERON:0007023!1.16e-23!115;UBERON:0000924!2.61e-23!173;UBERON:0006601!2.61e-23!173;UBERON:0004121!2.90e-23!169;UBERON:0002020!3.43e-22!34;UBERON:0003528!3.43e-22!34;UBERON:0001893!3.45e-22!34;UBERON:0002791!1.76e-21!33;UBERON:0003056!9.75e-21!61;UBERON:0001869!1.09e-20!32;UBERON:0000033!5.73e-20!123;UBERON:0000153!7.60e-20!129;UBERON:0007811!7.60e-20!129;UBERON:0000956!6.28e-16!25;UBERON:0000203!6.28e-16!25;UBERON:0002619!1.08e-14!22;UBERON:0001950!2.00e-13!20;UBERON:0000475!4.13e-10!365;UBERON:0000483!2.38e-09!309;UBERON:0000025!4.40e-09!194;UBERON:0000119!5.45e-09!312;UBERON:0000477!1.39e-08!286;UBERON:0003076!4.17e-08!15;UBERON:0003057!4.17e-08!15;UBERON:0002308!9.14e-08!9;UBERON:0000125!9.14e-08!9;UBERON:0002420!1.01e-07!9;UBERON:0007245!1.01e-07!9;UBERON:0010009!1.01e-07!9;UBERON:0010011!1.01e-07!9;UBERON:0000454!1.01e-07!9;UBERON:0000481!3.55e-07!347;UBERON:0000064!7.93e-07!219;UBERON:0004111!8.03e-07!241;UBERON:0004732!8.78e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;9.14e-29;34!UBERON:0003528;1.60e-28;34!UBERON:0002020;1.60e-28;34!UBERON:0002791;3.47e-28;32!UBERON:0001869;4.57e-28;32!UBERON:0002780;2.43e-25;41!UBERON:0001890;2.43e-25;41!UBERON:0000956;6.47e-24;25!UBERON:0000203;6.47e-24;25!UBERON:0000073;1.53e-23;53!UBERON:0002616;1.53e-23;53!UBERON:0002619;6.01e-22;22!UBERON:0001950;4.92e-20;20!UBERON:0000955;5.33e-17;68!UBERON:0001017;1.12e-16;75!UBERON:0001016;1.26e-14;83!UBERON:0000125;5.05e-11;9!UBERON:0002308;5.05e-11;9!UBERON:0002420;6.02e-11;9!UBERON:0007245;6.02e-11;9!UBERON:0010009;6.02e-11;9!UBERON:0010011;6.02e-11;9!UBERON:0000454;6.02e-11;9!UBERON:0009663;6.90e-09;7!UBERON:0000200;6.00e-08;6!UBERON:0004732;8.47e-08;13!UBERON:0011216;9.09e-08;132!UBERON:0007023;1.11e-07;114!UBERON:0002298;2.57e-07;6!UBERON:0004733;6.20e-07;12!UBERON:0002028;6.20e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0001893;9.14e-29;34!UBERON:0003528;1.60e-28;34!UBERON:0002020;1.60e-28;34!UBERON:0002791;3.47e-28;32!UBERON:0001869;4.57e-28;32!UBERON:0002780;2.43e-25;41!UBERON:0001890;2.43e-25;41!UBERON:0000956;6.47e-24;25!UBERON:0000203;6.47e-24;25!UBERON:0000073;1.53e-23;53!UBERON:0002616;1.53e-23;53!UBERON:0002619;6.01e-22;22!UBERON:0001950;4.92e-20;20!UBERON:0000955;5.33e-17;68!UBERON:0001017;1.12e-16;75!UBERON:0001016;1.26e-14;83!UBERON:0000125;5.05e-11;9!UBERON:0002308;5.05e-11;9!UBERON:0002420;6.02e-11;9!UBERON:0007245;6.02e-11;9!UBERON:0010009;6.02e-11;9!UBERON:0010011;6.02e-11;9!UBERON:0000454;6.02e-11;9!UBERON:0009663;6.90e-09;7!UBERON:0000200;6.00e-08;6!UBERON:0004732;8.47e-08;13!UBERON:0011216;9.09e-08;132!UBERON:0007023;1.11e-07;114!UBERON:0002298;2.57e-07;6!UBERON:0004733;6.20e-07;12!UBERON:0002028;6.20e-07;12 | ||
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| ||
|short_description=p1@PCDH9 | |short_description=p1@PCDH9 | ||
}} | }} |
Latest revision as of 21:21, 17 September 2015
Short description: | p1@PCDH9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCDH9_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000377861, ENST00000456367, ENST00000544246, NM_020403, NM_203487, uc001vik.2, uc001vil.2, uc001vin.3, uc010thl.1_5end |
EntrezGene: | PCDH9 |
HGNC: | 8661 |
UniProt: | Q5VT82Q9HC56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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B cell | 1.06e-08 | 14 |