FFCP PHASE1:Hg19::chr17:47286603..47286624,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2793 | |EntrezGene=2793 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4412 | |HGNC=4412 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-24bp_to_ENST00000515635_5end | |association_with_transcript=-24bp_to_ENST00000515635_5end | ||
|cluster_id=chr17:47286603..47286624,- | |||
|coexpression_cluster_id=C391 | |coexpression_cluster_id=C391 | ||
|description=CAGE_peak_4_at_GNGT2_5end | |description=CAGE_peak_4_at_GNGT2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000840!6.55e-11!5;CL:0001029!6.55e-11!5;CL:0000875!1.20e-07!3;CL:0002396!1.20e-07!3;CL:0000623!1.54e-07!3;CL:0000825!1.54e-07!3;CL:0000990!4.39e-07!8 | |ontology_enrichment_celltype=CL:0000840!6.55e-11!5;CL:0001029!6.55e-11!5;CL:0000875!1.20e-07!3;CL:0002396!1.20e-07!3;CL:0000623!1.54e-07!3;CL:0000825!1.54e-07!3;CL:0000990!4.39e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000840;1.96e-35;5!CL:0000990;8.99e-24;8!CL:0000451;1.60e-19;10!CL:0000313;2.25e-14;1!CL:0001014;5.55e-08;2!CL:0001016;5.55e-08;2!CL:0000159;7.78e-08;2 | |ontology_enrichment_celltype_v019=CL:0000840;1.96e-35;5!CL:0000990;8.99e-24;8!CL:0000451;1.60e-19;10!CL:0000313;2.25e-14;1!CL:0001014;5.55e-08;2!CL:0001016;5.55e-08;2!CL:0000159;7.78e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000840,2.34e-35,5;CL:0001029,2.34e-35,5;CL:0000990,1.01e-23,8;CL:0000451,1.77e-19,10;CL:0000313,3.15e-14,1;CL:0001014,6.15e-08,2;CL:0001016,6.15e-08,2;CL:0000159,9.19e-08,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2152;2.25e-14;1 | |ontology_enrichment_disease_v019=DOID:2152;2.25e-14;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2152,3.15e-14,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.72e-28;2!UBERON:0002757;4.72e-28;2!UBERON:0010134;4.72e-28;2!UBERON:0005408;4.72e-28;2!UBERON:0001899;4.72e-28;2!UBERON:0003296;1.51e-14;4!UBERON:0010133;1.51e-14;4!UBERON:0002784;1.51e-14;4!UBERON:0004911;2.25e-14;1!UBERON:0001894;1.05e-08;7!UBERON:0004909;7.78e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0001905;4.72e-28;2!UBERON:0002757;4.72e-28;2!UBERON:0010134;4.72e-28;2!UBERON:0005408;4.72e-28;2!UBERON:0001899;4.72e-28;2!UBERON:0003296;1.51e-14;4!UBERON:0010133;1.51e-14;4!UBERON:0002784;1.51e-14;4!UBERON:0004911;2.25e-14;1!UBERON:0001894;1.05e-08;7!UBERON:0004909;7.78e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.13e-28,2;UBERON:0002757,4.13e-28,2;UBERON:0010134,4.13e-28,2;UBERON:0005408,4.13e-28,2;UBERON:0001899,4.13e-28,2;UBERON:0003296,1.41e-14,4;UBERON:0010133,1.41e-14,4;UBERON:0002784,1.41e-14,4;UBERON:0004911,3.15e-14,1;UBERON:0001894,1.01e-08,7;UBERON:0006222,1.01e-08,7;UBERON:0004909,9.19e-08,2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0.112328631146495,0,0,0.285012743741249,0.19891667719909,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822189523018381,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,1.90090408889675,0,0,0,0.236777252044017,1.64225599384209,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,2.59637914923747,1.39303789839414,2.39324328933957,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,0.394061520403854,0.215627574859517,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0.318852545457645,0,0.5745161103971,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0,0,0,0,0,0,0,3.38971111170799,0,0,0,0,0.881747022766871,0,0,0,0,0,0,1.73953549791606,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0247650239635,0.77380195455795,0.0607495566580247,0,0,0.0524545881349981,12.8832410553676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40963004463334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0255760305528,0,0,0.818859587550484,0,0,0,0,0,0,0,0,0,0.127762427639595,3.74991285114801,5.04425583328236,0,0,0,0.115233987555779,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.714765441766563,0.94808167039636,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11855431797792,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0.0771741581079447,0.437119121007915,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0.61193297845189,0,0.275684698604535,0,0,0,0,0,0,0,0.129177819672012,0,2.4669009767735,0,0,0,0,0.26940821205835,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@GNGT2 | |short_description=p4@GNGT2 | ||
}} | }} |
Latest revision as of 20:01, 15 September 2015
Short description: | p4@GNGT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GNGT2_5end |
Coexpression cluster: | C391_large_bronchioalveolar_fibrosarcoma_lung_pancreatic_giant_testis |
Association with transcript: | -24bp_to_ENST00000515635_5end |
EntrezGene: | GNGT2 |
HGNC: | 4412 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 2.34e-35 | 5 |
common dendritic progenitor | 2.34e-35 | 5 |
conventional dendritic cell | 1.01e-23 | 8 |
dendritic cell | 1.77e-19 | 10 |
serous secreting cell | 3.15e-14 | 1 |
CD1a-positive Langerhans cell | 6.15e-08 | 2 |
immature CD1a-positive Langerhans cell | 6.15e-08 | 2 |
seromucus secreting cell | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
pineal body | 4.13e-28 | 2 |
regional part of epithalamus | 4.13e-28 | 2 |
secretory circumventricular organ | 4.13e-28 | 2 |
circumventricular organ | 4.13e-28 | 2 |
epithalamus | 4.13e-28 | 2 |
gland of diencephalon | 1.41e-14 | 4 |
neuroendocrine gland | 1.41e-14 | 4 |
regional part of diencephalon | 1.41e-14 | 4 |
epithelium of female gonad | 3.15e-14 | 1 |
diencephalon | 1.01e-08 | 7 |
future diencephalon | 1.01e-08 | 7 |
epithelium of gonad | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 3.15e-14 | 1 |