FFCP PHASE1:Hg19::chr6:75796064..75796066,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1303 | |EntrezGene=1303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2188 | |HGNC=2188 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=154bp_to_AK057081_5end | |association_with_transcript=154bp_to_AK057081_5end | ||
|cluster_id=chr6:75796064..75796066,- | |||
|coexpression_cluster_id=C259 | |coexpression_cluster_id=C259 | ||
|description=CAGE_peak_15_at_COL12A1_5end | |description=CAGE_peak_15_at_COL12A1_5end | ||
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|ontology_enrichment_celltype=CL:0002620!2.01e-17!23;CL:0000057!1.19e-14!75;CL:0000055!1.03e-12!180;CL:0000153!3.49e-11!9;CL:0000447!3.49e-11!9;CL:0000667!4.40e-09!6;CL:0000058!4.40e-09!6;CL:0000138!4.40e-09!6;CL:0002334!9.07e-09!12;CL:0000499!1.40e-08!27;CL:0002580!6.17e-08!3;CL:0002579!8.39e-08!3;CL:0002615!8.76e-08!3;CL:0000327!9.93e-07!14 | |ontology_enrichment_celltype=CL:0002620!2.01e-17!23;CL:0000057!1.19e-14!75;CL:0000055!1.03e-12!180;CL:0000153!3.49e-11!9;CL:0000447!3.49e-11!9;CL:0000667!4.40e-09!6;CL:0000058!4.40e-09!6;CL:0000138!4.40e-09!6;CL:0002334!9.07e-09!12;CL:0000499!1.40e-08!27;CL:0002580!6.17e-08!3;CL:0002579!8.39e-08!3;CL:0002615!8.76e-08!3;CL:0000327!9.93e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0002334;6.89e-31;12!CL:0002580;3.90e-24;3!CL:0002579;6.00e-24;3!CL:0002617;7.89e-17;2!CL:0000136;3.03e-15;13!CL:0002615;1.09e-11;3!CL:0002616;1.81e-09;1!CL:0002581;6.98e-09;1!CL:0002620;3.32e-08;23!CL:0000153;4.27e-08;9!CL:0000447;4.27e-08;9 | |ontology_enrichment_celltype_v019=CL:0002334;6.89e-31;12!CL:0002580;3.90e-24;3!CL:0002579;6.00e-24;3!CL:0002617;7.89e-17;2!CL:0000136;3.03e-15;13!CL:0002615;1.09e-11;3!CL:0002616;1.81e-09;1!CL:0002581;6.98e-09;1!CL:0002620;3.32e-08;23!CL:0000153;4.27e-08;9!CL:0000447;4.27e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002334,5.28e-31,12;CL:0002580,2.44e-24,3;CL:0002579,7.31e-24,3;CL:0002617,5.32e-17,2;CL:0000057,7.59e-15,76;CL:0000136,3.23e-13,15;CL:0002615,1.27e-11,3;CL:0002616,1.74e-09,1;CL:0002581,5.75e-09,1;CL:0002620,3.00e-08,23;CL:0000153,5.02e-08,9;CL:0000447,5.02e-08,9;CL:0000134,1.39e-07,354;CL:0002320,2.35e-07,361 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.82e-09;1!UBERON:0003099;6.98e-09;1!UBERON:0003852;6.98e-09;1 | |ontology_enrichment_development_v019=UBERON:0000358;2.82e-09;1!UBERON:0003099;6.98e-09;1!UBERON:0003852;6.98e-09;1 | ||
|ontology_enrichment_disease=DOID:17!1.40e-07!5;DOID:450!1.40e-07!5;DOID:66!1.40e-07!5;DOID:423!1.40e-07!5;DOID:0080000!1.40e-07!5;DOID:11722!1.40e-07!5 | |ontology_enrichment_disease=DOID:17!1.40e-07!5;DOID:450!1.40e-07!5;DOID:66!1.40e-07!5;DOID:423!1.40e-07!5;DOID:0080000!1.40e-07!5;DOID:11722!1.40e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:17;2.20e-14;5!DOID:450;2.20e-14;5!DOID:66;2.20e-14;5!DOID:423;2.20e-14;5!DOID:0080000;2.20e-14;5!DOID:11722;2.20e-14;5 | |ontology_enrichment_disease_v019=DOID:17;2.20e-14;5!DOID:450;2.20e-14;5!DOID:66;2.20e-14;5!DOID:423;2.20e-14;5!DOID:0080000;2.20e-14;5!DOID:11722;2.20e-14;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,2.01e-14,5;DOID:450,2.01e-14,5;DOID:66,2.01e-14,5;DOID:423,2.01e-14,5;DOID:0080000,2.01e-14,5;DOID:11722,2.01e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!6.44e-14!6;UBERON:0002358!6.44e-14!6;UBERON:0003684!6.44e-14!6;UBERON:0001178!6.44e-14!6;UBERON:0004457!3.63e-11!12;UBERON:0000042!3.63e-11!12;UBERON:0002097!8.45e-11!40;UBERON:0003102!3.85e-09!95;UBERON:0002199!4.15e-09!45;UBERON:0002416!4.15e-09!45;UBERON:0000310!5.71e-08!10;UBERON:0001443!3.74e-07!11 | |ontology_enrichment_uberon=UBERON:0003688!6.44e-14!6;UBERON:0002358!6.44e-14!6;UBERON:0003684!6.44e-14!6;UBERON:0001178!6.44e-14!6;UBERON:0004457!3.63e-11!12;UBERON:0000042!3.63e-11!12;UBERON:0002097!8.45e-11!40;UBERON:0003102!3.85e-09!95;UBERON:0002199!4.15e-09!45;UBERON:0002416!4.15e-09!45;UBERON:0000310!5.71e-08!10;UBERON:0001443!3.74e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.16e-32;6!UBERON:0002358;1.16e-32;6!UBERON:0003684;1.16e-32;6!UBERON:0001178;1.16e-32;6!UBERON:0004457;9.03e-31;9!UBERON:0000042;9.03e-31;9!UBERON:0000310;1.51e-19;10!UBERON:0001443;9.24e-18;11!UBERON:0005406;1.27e-16;2!UBERON:0005705;6.98e-09;1!UBERON:0008193;6.98e-09;1!UBERON:0010912;6.98e-09;1!UBERON:0002514;6.98e-09;1!UBERON:0003457;6.98e-09;1!UBERON:0008907;6.98e-09;1!UBERON:0008001;6.98e-09;1!UBERON:0007213;6.98e-09;1!UBERON:0009891;6.98e-09;1!UBERON:0007914;6.98e-09;1!UBERON:0007375;6.98e-09;1!UBERON:0003323;6.98e-09;1!UBERON:0010258;6.98e-09;1!UBERON:0005253;6.98e-09;1!UBERON:0007842;6.98e-09;1!UBERON:0002397;6.98e-09;1!UBERON:0003113;6.98e-09;1!UBERON:0003277;6.98e-09;1!UBERON:0001709;6.98e-09;1!UBERON:0002244;6.98e-09;1!UBERON:0005620;6.98e-09;1!UBERON:0010364;6.98e-09;1!UBERON:0004288;6.98e-09;1 | |ontology_enrichment_uberon_v019=UBERON:0003688;1.16e-32;6!UBERON:0002358;1.16e-32;6!UBERON:0003684;1.16e-32;6!UBERON:0001178;1.16e-32;6!UBERON:0004457;9.03e-31;9!UBERON:0000042;9.03e-31;9!UBERON:0000310;1.51e-19;10!UBERON:0001443;9.24e-18;11!UBERON:0005406;1.27e-16;2!UBERON:0005705;6.98e-09;1!UBERON:0008193;6.98e-09;1!UBERON:0010912;6.98e-09;1!UBERON:0002514;6.98e-09;1!UBERON:0003457;6.98e-09;1!UBERON:0008907;6.98e-09;1!UBERON:0008001;6.98e-09;1!UBERON:0007213;6.98e-09;1!UBERON:0009891;6.98e-09;1!UBERON:0007914;6.98e-09;1!UBERON:0007375;6.98e-09;1!UBERON:0003323;6.98e-09;1!UBERON:0010258;6.98e-09;1!UBERON:0005253;6.98e-09;1!UBERON:0007842;6.98e-09;1!UBERON:0002397;6.98e-09;1!UBERON:0003113;6.98e-09;1!UBERON:0003277;6.98e-09;1!UBERON:0001709;6.98e-09;1!UBERON:0002244;6.98e-09;1!UBERON:0005620;6.98e-09;1!UBERON:0010364;6.98e-09;1!UBERON:0004288;6.98e-09;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.66e-32,6;UBERON:0002358,1.66e-32,6;UBERON:0003684,1.66e-32,6;UBERON:0001178,1.66e-32,6;UBERON:0004457,7.27e-23,12;UBERON:0000042,7.27e-23,12;UBERON:0000310,9.89e-20,10;UBERON:0001443,6.30e-18,11;UBERON:0005406,1.00e-16,2;UBERON:0005705,6.72e-09,1;UBERON:0008193,6.72e-09,1;UBERON:0010912,6.72e-09,1;UBERON:0002514,6.72e-09,1;UBERON:0003457,6.72e-09,1;UBERON:0008907,6.72e-09,1;UBERON:0008001,6.72e-09,1;UBERON:0007213,6.72e-09,1;UBERON:0009891,6.72e-09,1;UBERON:0007914,6.72e-09,1;UBERON:0009292,6.72e-09,1;UBERON:0003099,6.72e-09,1;UBERON:0007375,6.72e-09,1;UBERON:0003323,6.72e-09,1;UBERON:0010258,6.72e-09,1;UBERON:0007842,6.72e-09,1;UBERON:0009494,6.72e-09,1;UBERON:0010042,6.72e-09,1;UBERON:0010045,6.72e-09,1;UBERON:0010259,6.72e-09,1;UBERON:0010359,6.72e-09,1;UBERON:0009526,6.72e-09,1;UBERON:0002397,6.72e-09,1;UBERON:0003113,6.72e-09,1;UBERON:0003277,6.72e-09,1;UBERON:0001709,6.72e-09,1;UBERON:0004066,6.72e-09,1;UBERON:0002244,6.72e-09,1;UBERON:0005620,6.72e-09,1;UBERON:0004362,6.72e-09,1;UBERON:0010364,6.72e-09,1;UBERON:0010046,6.72e-09,1;UBERON:0005868,6.72e-09,1;UBERON:0007238,6.72e-09,1;UBERON:0004288,6.72e-09,1;UBERON:0004068,6.72e-09,1;UBERON:0010334,6.72e-09,1;UBERON:0003852,6.72e-09,1;UBERON:0010253,6.72e-09,1;UBERON:0002384,4.80e-07,371 | |||
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|short_description=p15@COL12A1 | |short_description=p15@COL12A1 | ||
}} | }} |
Latest revision as of 19:24, 19 September 2015
Short description: | p15@COL12A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_COL12A1_5end |
Coexpression cluster: | C259_Preadipocyte_Adipocyte_Fibroblast_Chondrocyte_tenocyte_normal_Ewing |
Association with transcript: | 154bp_to_AK057081_5end |
EntrezGene: | COL12A1 |
HGNC: | 2188 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 5.28e-31 | 12 |
preadipocyte of the breast | 2.44e-24 | 3 |
omentum preadipocyte | 7.31e-24 | 3 |
adipocyte of breast | 5.32e-17 | 2 |
fibroblast | 7.59e-15 | 76 |
fat cell | 3.23e-13 | 15 |
adipocyte of omentum tissue | 1.27e-11 | 3 |
perirenal adipocyte cell | 1.74e-09 | 1 |
perirenal preadipocyte | 5.75e-09 | 1 |
skin fibroblast | 3.00e-08 | 23 |
GAG secreting cell | 5.02e-08 | 9 |
carbohydrate secreting cell | 5.02e-08 | 9 |
mesenchymal cell | 1.39e-07 | 354 |
connective tissue cell | 2.35e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.01e-14 | 5 |
myotonic disease | 2.01e-14 | 5 |
muscle tissue disease | 2.01e-14 | 5 |
myopathy | 2.01e-14 | 5 |
muscular disease | 2.01e-14 | 5 |
myotonic dystrophy | 2.01e-14 | 5 |