FFCP PHASE1:Hg19::chr20:30181389..30181408,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:30181389..30181408,+ | |||
|description=CAGE_peak_at_chr20:30181389..30181408,+ | |description=CAGE_peak_at_chr20:30181389..30181408,+ | ||
|id=chr20:30181389..30181408,+ | |id=chr20:30181389..30181408,+ | ||
|ontology_enrichment_celltype=CL:0000066!9.70e-14!254;CL:0000077!4.36e-07!19 | |ontology_enrichment_celltype=CL:0000066!9.70e-14!254;CL:0000077!4.36e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002602;8.59e-21;2 | |ontology_enrichment_celltype_v019=CL:0002602;8.59e-21;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002602,3.47e-21,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!7.33e-19!106;DOID:0050687!7.43e-15!143;DOID:162!1.50e-10!235;DOID:14566!6.68e-10!239 | |ontology_enrichment_disease=DOID:305!7.33e-19!106;DOID:0050687!7.43e-15!143;DOID:162!1.50e-10!235;DOID:14566!6.68e-10!239 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006444;8.59e-21;2!UBERON:0001995;8.59e-21;2!UBERON:0004715;8.59e-21;2!UBERON:0002418;3.38e-14;3!UBERON:0004755;3.38e-14;3!UBERON:0011135;6.96e-09;5!UBERON:0002216;6.96e-09;5!UBERON:0011134;6.96e-09;5!UBERON:0002209;6.96e-09;5!UBERON:0002213;6.96e-09;5!UBERON:0007844;6.96e-09;5!UBERON:0011138;6.96e-09;5!UBERON:0001130;6.96e-09;5!UBERON:0001066;6.96e-09;5!UBERON:0001468;6.96e-09;5 | |ontology_enrichment_uberon_v019=UBERON:0006444;8.59e-21;2!UBERON:0001995;8.59e-21;2!UBERON:0004715;8.59e-21;2!UBERON:0002418;3.38e-14;3!UBERON:0004755;3.38e-14;3!UBERON:0011135;6.96e-09;5!UBERON:0002216;6.96e-09;5!UBERON:0011134;6.96e-09;5!UBERON:0002209;6.96e-09;5!UBERON:0002213;6.96e-09;5!UBERON:0007844;6.96e-09;5!UBERON:0011138;6.96e-09;5!UBERON:0001130;6.96e-09;5!UBERON:0001066;6.96e-09;5!UBERON:0001468;6.96e-09;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006444,3.47e-21,2;UBERON:0001995,3.47e-21,2;UBERON:0004715,3.47e-21,2;UBERON:0002418,1.85e-14,3;UBERON:0004755,1.85e-14,3;UBERON:0011135,4.87e-09,5;UBERON:0002216,4.87e-09,5;UBERON:0011134,4.87e-09,5;UBERON:0002209,4.87e-09,5;UBERON:0002213,4.87e-09,5;UBERON:0005856,4.87e-09,5;UBERON:0005866,4.87e-09,5;UBERON:0005863,4.87e-09,5;UBERON:0007844,4.87e-09,5;UBERON:0011138,4.87e-09,5;UBERON:0001130,4.87e-09,5;UBERON:0001066,4.87e-09,5;UBERON:0001468,4.87e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,2.79120467188971,0,0.263766978228454,1.36142988256051,1.65698687863958,0,0,0,0,0.369363174230364,0.204000691244253,0,0.286235987131057,0.547497700291537,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0.117434498643765,0,0,0,0.737005903870608,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0.438977620880838,0,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0.18611685633159,0.337552664482532,0.194874010322397,0,0,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.591534000199219,1.01150814046861,0,0.661763836394364,0.871517776369625,0.237270619111097,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0.100528972411631,0,0,1.03993478527958,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,3.57656445851882,0,0,0,0.514414748524284,0,1.0656887160644,0,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0.716243852959582,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.207970861530807,0.178428988797162,0.315404830067869,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.460385919864187,0.280660094433074,0.256278298511402,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.165018999841176,0,0,0,0,0.462145851343933,0.15350367472613,0,0.214840489736547,0.145016693914229,0.0852266274161009,0,0,0,0,0,0.464845549297286,0,0,0,0,0.869932992075073,0,0.143124886741991,0.372158369359667,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,0,0,0,0.358042349351218,0,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0.472775363535873,0,0,0,0,0,0,0,0,0,0.980446171670911,1.11538995422883,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.782658475728359,0,0,0,0,0,0,0,0,0.661983911750998,0,0,0.569219092059585,0.554698692052555,0.173559738335131,0.293977192243133,0.174118413160805,0,0,1.25783230675811,1.90032224424082,0.821154570532092,0,0,0,0,0.596143835108969,0,0.195551382734803,0,0,0.39961921916426,0.144090417154106,0,0,0,0.248505071130865,1.17847017308398,0.407712618220842,1.15063130943567,0.611989305817931,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0.315132729228895,0.247247575143499,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0.342173675768659,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0.414706207840855,0,0,0,0,0.406870733204662,0,0,0,0,0.800055529326307,0,0.673498977531838,0,0.57785949122191,0,0,0.226705925512272,0.694567422971502,0,0.537266523244462,0.308801447160972,0.438568099157414,0,0,0.337884881306145,3.33113974164331,1.38172136692479,0.303859956177382,0,0,0,0,0.655219697692825,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,1.37406805901436,0.353909170043221,0.183428598521679,0.231051332300676,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,1.18193840883968,0.111231401892069,0.235479278551542,0,0,0,2.15927591218621,0,0,0,0,0,0,0.414432328326074,0,0.691259661814092,0,0,0,0,0,0.93061915699296,0,0.782988022584546,0.098150233615243,0.243835849964539,0,0,0,0,0,0.397901550322736,0,1.01651473835064,0,0,0.771741581079447,0,0,0.245148321753905,0.471353094203252,0,0,0,0.339854229375634,0,0,0,0.357107877211315,0,0.240724100067505,0,0,0,0,0,0,0.5290268405154,0,0.462175628631418,0,0,0.109265571963696,0,0.101988829741982,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0.112131862580613,0.0636471582781649,0,0.217716747896961,0,0,0,0,0.162806537221949,0.533636729388577,0,0.179650404213174,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,2.79120467188971,0,0.263766978228454,1.36142988256051,1.65698687863958,0,0,0,0,0.369363174230364,0.204000691244253,0,0.286235987131057,0.547497700291537,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0.117434498643765,0,0,0,0.737005903870608,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0.438977620880838,0,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0.18611685633159,0.337552664482532,0.194874010322397,0,0,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.591534000199219,1.01150814046861,0,0.661763836394364,0.871517776369625,0.237270619111097,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0.100528972411631,0,0,1.03993478527958,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,3.57656445851882,0,0,0,0.514414748524284,0,1.0656887160644,0,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0.716243852959582,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.207970861530807,0.178428988797162,0.315404830067869,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.460385919864187,0.280660094433074,0.256278298511402,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.165018999841176,0,0,0,0,0.462145851343933,0.15350367472613,0,0.214840489736547,0.145016693914229,0.0852266274161009,0,0,0,0,0,0.464845549297286,0,0,0,0,0.869932992075073,0,0.143124886741991,0.372158369359667,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,0,0,0,0.358042349351218,0,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0.472775363535873,0,0,0,0,0,0,0,0,0,0.980446171670911,1.11538995422883,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.782658475728359,0,0,0,0,0,0,0,0,0.661983911750998,0,0,0.569219092059585,0.554698692052555,0.173559738335131,0.293977192243133,0.174118413160805,0,0,1.25783230675811,1.90032224424082,0.821154570532092,0,0,0,0,0.596143835108969,0,0.195551382734803,0,0,0.39961921916426,0.144090417154106,0,0,0,0.248505071130865,1.17847017308398,0.407712618220842,1.15063130943567,0.611989305817931,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0.315132729228895,0.247247575143499,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0.342173675768659,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0.414706207840855,0,0,0,0,0.406870733204662,0,0,0,0,0.800055529326307,0,0.673498977531838,0,0.57785949122191,0,0,0.226705925512272,0.694567422971502,0,0.537266523244462,0.308801447160972,0.438568099157414,0,0,0.337884881306145,3.33113974164331,1.38172136692479,0.303859956177382,0,0,0,0,0.655219697692825,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,1.37406805901436,0.353909170043221,0.183428598521679,0.231051332300676,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,1.18193840883968,0.111231401892069,0.235479278551542,0,0,0,2.15927591218621,0,0,0,0,0,0,0.414432328326074,0,0.691259661814092,0,0,0,0,0,0.93061915699296,0,0.782988022584546,0.098150233615243,0.243835849964539,0,0,0,0,0,0.397901550322736,0,1.01651473835064,0,0,0.771741581079447,0,0,0.245148321753905,0.471353094203252,0,0,0,0.339854229375634,0,0,0,0.357107877211315,0,0.240724100067505,0,0,0,0,0,0,0.5290268405154,0,0.462175628631418,0,0,0.109265571963696,0,0.101988829741982,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0.112131862580613,0.0636471582781649,0,0.217716747896961,0,0,0,0,0.162806537221949,0.533636729388577,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p@chr20:30181389..30181408,+ | |short_description=p@chr20:30181389..30181408,+ | ||
}} | }} |
Latest revision as of 12:49, 28 July 2015
Short description: | p@chr20:30181389..30181408, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:30181389..30181408, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 3.47e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
annulus fibrosus | 3.47e-21 | 2 |
fibrocartilage | 3.47e-21 | 2 |
annulus fibrosus disci intervertebralis | 3.47e-21 | 2 |
cartilage tissue | 1.85e-14 | 3 |
skeletal tissue | 1.85e-14 | 3 |
intervertebral cartilage | 4.87e-09 | 5 |
symphysis | 4.87e-09 | 5 |
nonsynovial joint | 4.87e-09 | 5 |
fibrous joint | 4.87e-09 | 5 |
cartilaginous joint | 4.87e-09 | 5 |
developing mesenchymal condensation | 4.87e-09 | 5 |
pre-cartilage condensation | 4.87e-09 | 5 |
cartilaginous condensation | 4.87e-09 | 5 |
cartilage element | 4.87e-09 | 5 |
post-cranial axial skeletal system | 4.87e-09 | 5 |
vertebral column | 4.87e-09 | 5 |
intervertebral disk | 4.87e-09 | 5 |
intervertebral joint | 4.87e-09 | 5 |