FFCP PHASE1:Hg19::chr4:57931805..57931824,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-36bp_to_ENST00000512512_5end | |association_with_transcript=-36bp_to_ENST00000512512_5end | ||
|cluster_id=chr4:57931805..57931824,- | |||
|coexpression_cluster_id=C479 | |coexpression_cluster_id=C479 | ||
|description=CAGE_peak_1_at_ENST00000512512_5end | |description=CAGE_peak_1_at_ENST00000512512_5end | ||
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|ontology_enrichment_celltype=CL:0000055!4.24e-14!180;CL:0000057!2.00e-09!75;CL:0002334!9.73e-09!12;CL:0000183!8.42e-07!59 | |ontology_enrichment_celltype=CL:0000055!4.24e-14!180;CL:0000057!2.00e-09!75;CL:0002334!9.73e-09!12;CL:0000183!8.42e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002549;3.04e-12;2!CL:0000077;9.66e-11;19!CL:0000197;5.25e-09;6!CL:0000098;5.25e-09;6!CL:0002167;5.25e-09;6!CL:0000746;1.14e-08;3!CL:0002616;2.75e-07;1!CL:0002581;5.94e-07;1 | |ontology_enrichment_celltype_v019=CL:0002549;3.04e-12;2!CL:0000077;9.66e-11;19!CL:0000197;5.25e-09;6!CL:0000098;5.25e-09;6!CL:0002167;5.25e-09;6!CL:0000746;1.14e-08;3!CL:0002616;2.75e-07;1!CL:0002581;5.94e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002549,3.05e-12,2;CL:0000077,9.86e-11,19;CL:0000197,3.31e-09,6;CL:0000098,3.31e-09,6;CL:0002167,3.31e-09,6;CL:0000746,1.15e-08,3;CL:0000513,1.15e-08,3;CL:0002616,2.67e-07,1;CL:0002581,4.31e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000513;1.14e-08;3!UBERON:0010227;5.94e-07;1!UBERON:0003099;5.94e-07;1!UBERON:0003852;5.94e-07;1 | |ontology_enrichment_development_v019=CL:0000513;1.14e-08;3!UBERON:0010227;5.94e-07;1!UBERON:0003099;5.94e-07;1!UBERON:0003852;5.94e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5662;1.45e-07;1 | |ontology_enrichment_disease_v019=DOID:5662;1.45e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:5662,1.46e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0005406;1.43e-12;2!UBERON:0005629;3.04e-12;2!UBERON:0005358;3.04e-12;2!UBERON:0001886;3.04e-12;2!UBERON:0004086;3.04e-12;2!UBERON:0005282;3.04e-12;2!UBERON:0005281;3.04e-12;2!UBERON:0001282;2.75e-07;1!UBERON:0009842;2.75e-07;1!UBERON:0003704;2.75e-07;1!UBERON:0001171;2.75e-07;1!UBERON:0001172;2.75e-07;1!UBERON:0002079;5.94e-07;1!UBERON:0005705;5.94e-07;1!UBERON:0008193;5.94e-07;1!UBERON:0010912;5.94e-07;1!UBERON:0002514;5.94e-07;1!UBERON:0003457;5.94e-07;1!UBERON:0008907;5.94e-07;1!UBERON:0008001;5.94e-07;1!UBERON:0007213;5.94e-07;1!UBERON:0009891;5.94e-07;1!UBERON:0007914;5.94e-07;1!UBERON:0007375;5.94e-07;1!UBERON:0003323;5.94e-07;1!UBERON:0010258;5.94e-07;1!UBERON:0005253;5.94e-07;1!UBERON:0007842;5.94e-07;1!UBERON:0002397;5.94e-07;1!UBERON:0003113;5.94e-07;1!UBERON:0003277;5.94e-07;1!UBERON:0001709;5.94e-07;1!UBERON:0002244;5.94e-07;1!UBERON:0005620;5.94e-07;1!UBERON:0010364;5.94e-07;1!UBERON:0004288;5.94e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0005406;1.43e-12;2!UBERON:0005629;3.04e-12;2!UBERON:0005358;3.04e-12;2!UBERON:0001886;3.04e-12;2!UBERON:0004086;3.04e-12;2!UBERON:0005282;3.04e-12;2!UBERON:0005281;3.04e-12;2!UBERON:0001282;2.75e-07;1!UBERON:0009842;2.75e-07;1!UBERON:0003704;2.75e-07;1!UBERON:0001171;2.75e-07;1!UBERON:0001172;2.75e-07;1!UBERON:0002079;5.94e-07;1!UBERON:0005705;5.94e-07;1!UBERON:0008193;5.94e-07;1!UBERON:0010912;5.94e-07;1!UBERON:0002514;5.94e-07;1!UBERON:0003457;5.94e-07;1!UBERON:0008907;5.94e-07;1!UBERON:0008001;5.94e-07;1!UBERON:0007213;5.94e-07;1!UBERON:0009891;5.94e-07;1!UBERON:0007914;5.94e-07;1!UBERON:0007375;5.94e-07;1!UBERON:0003323;5.94e-07;1!UBERON:0010258;5.94e-07;1!UBERON:0005253;5.94e-07;1!UBERON:0007842;5.94e-07;1!UBERON:0002397;5.94e-07;1!UBERON:0003113;5.94e-07;1!UBERON:0003277;5.94e-07;1!UBERON:0001709;5.94e-07;1!UBERON:0002244;5.94e-07;1!UBERON:0005620;5.94e-07;1!UBERON:0010364;5.94e-07;1!UBERON:0004288;5.94e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,1.01e-12,2;UBERON:0005629,3.05e-12,2;UBERON:0005358,3.05e-12,2;UBERON:0001886,3.05e-12,2;UBERON:0004086,3.05e-12,2;UBERON:0005282,3.05e-12,2;UBERON:0005281,3.05e-12,2;UBERON:0001282,2.52e-07,1;UBERON:0009842,2.52e-07,1;UBERON:0003704,2.52e-07,1;UBERON:0001171,2.52e-07,1;UBERON:0001172,2.52e-07,1;UBERON:0005705,3.60e-07,1;UBERON:0008193,3.60e-07,1;UBERON:0010912,3.60e-07,1;UBERON:0002514,3.60e-07,1;UBERON:0003457,3.60e-07,1;UBERON:0008907,3.60e-07,1;UBERON:0008001,3.60e-07,1;UBERON:0007213,3.60e-07,1;UBERON:0009891,3.60e-07,1;UBERON:0007914,3.60e-07,1;UBERON:0009292,3.60e-07,1;UBERON:0003099,3.60e-07,1;UBERON:0007375,3.60e-07,1;UBERON:0003323,3.60e-07,1;UBERON:0010258,3.60e-07,1;UBERON:0007842,3.60e-07,1;UBERON:0009494,3.60e-07,1;UBERON:0010042,3.60e-07,1;UBERON:0010045,3.60e-07,1;UBERON:0010259,3.60e-07,1;UBERON:0010359,3.60e-07,1;UBERON:0009526,3.60e-07,1;UBERON:0002397,3.60e-07,1;UBERON:0003113,3.60e-07,1;UBERON:0003277,3.60e-07,1;UBERON:0001709,3.60e-07,1;UBERON:0004066,3.60e-07,1;UBERON:0002244,3.60e-07,1;UBERON:0005620,3.60e-07,1;UBERON:0004362,3.60e-07,1;UBERON:0010364,3.60e-07,1;UBERON:0010046,3.60e-07,1;UBERON:0005868,3.60e-07,1;UBERON:0007238,3.60e-07,1;UBERON:0004288,3.60e-07,1;UBERON:0004068,3.60e-07,1;UBERON:0010334,3.60e-07,1;UBERON:0003852,3.60e-07,1;UBERON:0010253,3.60e-07,1;UBERON:0002079,4.85e-07,1 | |||
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|short_description=p1@ENST00000512512 | |short_description=p1@ENST00000512512 | ||
}} | }} |
Latest revision as of 05:53, 30 July 2015
Short description: | p1@ENST00000512512 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000512512_5end |
Coexpression cluster: | C479_pleomorphic_mesothelioma_cholangiocellular_melanoma_Saos2_serous_glioblastoma |
Association with transcript: | -36bp_to_ENST00000512512_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 3.05e-12 | 2 |
mesothelial cell | 9.86e-11 | 19 |
receptor cell | 3.31e-09 | 6 |
sensory epithelial cell | 3.31e-09 | 6 |
olfactory epithelial cell | 3.31e-09 | 6 |
cardiac muscle cell | 1.15e-08 | 3 |
cardiac muscle myoblast | 1.15e-08 | 3 |
perirenal adipocyte cell | 2.67e-07 | 1 |
perirenal preadipocyte | 4.31e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.46e-07 | 1 |