FFCP PHASE1:Hg19::chr11:57158110..57158129,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5553 | |EntrezGene=5553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9362 | |HGNC=9362 | ||
|TSSclassifier=strong | |||
|UniProt=P13727,A6XMW0 | |UniProt=P13727,A6XMW0 | ||
|association_with_transcript=0bp_to_ENST00000311862,ENST00000533605,NM_001243245,NM_002728,uc001njy.1,uc001nkc.2,uc001nkd.2_5end | |association_with_transcript=0bp_to_ENST00000311862,ENST00000533605,NM_001243245,NM_002728,uc001njy.1,uc001nkc.2,uc001nkd.2_5end | ||
|cluster_id=chr11:57158110..57158129,- | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_1_at_PRG2_5end | |description=CAGE_peak_1_at_PRG2_5end | ||
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|ontology_enrichment_celltype=CL:0000763!5.98e-17!112;CL:0000049!5.98e-17!112;CL:0000037!5.10e-08!172;CL:0000566!5.10e-08!172;CL:0002274!6.65e-08!5;CL:0000457!6.65e-08!5;CL:0002191!6.65e-08!5;CL:0000097!6.65e-08!5;CL:0000831!6.65e-08!5;CL:0002028!6.65e-08!5;CL:0000988!2.31e-07!182;CL:0002032!2.45e-07!165;CL:0000837!2.45e-07!165 | |ontology_enrichment_celltype=CL:0000763!5.98e-17!112;CL:0000049!5.98e-17!112;CL:0000037!5.10e-08!172;CL:0000566!5.10e-08!172;CL:0002274!6.65e-08!5;CL:0000457!6.65e-08!5;CL:0002191!6.65e-08!5;CL:0000097!6.65e-08!5;CL:0000831!6.65e-08!5;CL:0002028!6.65e-08!5;CL:0000988!2.31e-07!182;CL:0002032!2.45e-07!165;CL:0000837!2.45e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.76e-10;3!CL:0000764;3.17e-07;2!CL:0000558;3.17e-07;2 | |ontology_enrichment_celltype_v019=CL:0002541;2.76e-10;3!CL:0000764;3.17e-07;2!CL:0000558;3.17e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.12e-11,108;CL:0000049,1.12e-11,108;CL:0002541,2.76e-10,3;CL:0000764,3.17e-07,2;CL:0000765,3.17e-07,2;CL:0000050,3.17e-07,2;CL:0000038,3.17e-07,2;CL:0000558,3.17e-07,2;CL:0000547,3.17e-07,2;CL:0000549,3.17e-07,2;CL:0000550,3.17e-07,2;CL:0000552,3.17e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:8692!2.04e-20!31;DOID:1240!1.09e-14!39;DOID:2531!1.34e-09!51;DOID:0060083!1.34e-09!51;DOID:1036!1.46e-08!8 | |ontology_enrichment_disease=DOID:8692!2.04e-20!31;DOID:1240!1.09e-14!39;DOID:2531!1.34e-09!51;DOID:0060083!1.34e-09!51;DOID:1036!1.46e-08!8 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.77e-21;31!DOID:1240;4.86e-14;39!DOID:2531;1.58e-08;51!DOID:0060083;1.58e-08;51 | |ontology_enrichment_disease_v019=DOID:8692;2.77e-21;31!DOID:1240;4.86e-14;39!DOID:2531;1.58e-08;51!DOID:0060083;1.58e-08;51 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,2.45e-22,31;DOID:1240,7.90e-17,39;DOID:2531,7.62e-12,51;DOID:0060083,7.62e-12,51 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.65e-10;10!UBERON:0000158;1.65e-10;10!UBERON:0003124;2.76e-10;3!UBERON:0000920;2.76e-10;3!UBERON:0004177;2.97e-09;5!UBERON:0005057;2.97e-09;5!UBERON:0000922;2.46e-07;49!UBERON:0002370;7.73e-07;2!UBERON:0005058;7.73e-07;2!UBERON:0009113;7.73e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0005631;1.65e-10;10!UBERON:0000158;1.65e-10;10!UBERON:0003124;2.76e-10;3!UBERON:0000920;2.76e-10;3!UBERON:0004177;2.97e-09;5!UBERON:0005057;2.97e-09;5!UBERON:0000922;2.46e-07;49!UBERON:0002370;7.73e-07;2!UBERON:0005058;7.73e-07;2!UBERON:0009113;7.73e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.76e-10,3;UBERON:0005631,7.06e-10,14;UBERON:0000158,7.06e-10,14;UBERON:0003124,1.81e-07,7 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,36.8462373492261,0,0,0,0,0,9.68881449804996,0,0,0,0.223915474239924,0.647787332037959,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,23.7908391442247,8.40762844472304,78.751841347748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,1.62273696827342,1.0447784237956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0,3.71577905721821,0,0,0,0,0,0,53.2076296927619,66.1243739439328,2.69526550203004,0.720599767084807,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,1.29964888536674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,213.55911985314,247.317936669556,0,0,0,505.31312112043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59691809095107,0,0,0.429374660225974,0,0,0,0,0,25.138056586149,0,0,0,0,1.61745985258653,0,0.421258456238981,0,3.89941583410055,0,0.136499911407986,0.565621727814851,1.13008116620243,2.75682671773062,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,487.85317562527,0,0,0,0,0.507447609232169,0,0.569647187174163,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,14.7459135001922,6.56188106444037,0,2.52717460302113,3.87998954356427,115.159723393172,47.6205506471128,0,6.74469915435538,0.201799707191048,0.425846237690326,3.43505344755765,0,0,0,0,3.06246791284767,2.46174797895425,49.4933891611049,0.33307196799782,33.8368812210839,0,0,0,0,0,3791.97865108873,70.9745587190006,2.76444631889309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0.108647371922008,21618.7085950322,235.863803009795,18881.6908709081,0,1566.19201805316,1698.5171773377,0.451191321234361,0.392125068635479,0.167821586975843,3.41556718903533,197.08135793567,0,0,0,0,0,0,1.22206028986725,0.296521128680622,0,0,0.404406797884062,1.60515529459758,0,0,0,0,0,2.41981432097328,2.14250933141343,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0.279282401272254,2.97908551215189,0,0,0,0,3.89664140423012,7.56629755439048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,2.7800931711549,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,11.9034155086541,0,0,0.146552233678082,304.765844498109,0,0,0,0,2.56289790162467,5.03053776318931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,1.10961172300523,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.300515217994437,0.380805212168795,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,665.00955118358,0,0,0,0,87.0908164046162,0,0.970423302570136,0,0,0.509197589862076,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,1941.96098997065,0,0,0.0679697329768317,0,0,0,0,0,0,2.73947616152849,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,6.95888658802919,14.085618798715,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,2.5359343655004,0,1.50374268767766,37.1277434727805,0,0,0,0,0.730336388246517,0,0,0,0,7.85431242612679,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4337408597618,0,8.07361372950076,65.3646741535384,0.112131862580613,0,0,0,1.02669990325584,0.134704106029175,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,36.8462373492261,0,0,0,0,0,9.68881449804996,0,0,0,0.223915474239924,0.647787332037959,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,23.7908391442247,8.40762844472304,78.751841347748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,1.62273696827342,1.0447784237956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0,3.71577905721821,0,0,0,0,0,0,53.2076296927619,66.1243739439328,2.69526550203004,0.720599767084807,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,1.29964888536674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,213.55911985314,247.317936669556,0,0,0,505.31312112043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59691809095107,0,0,0.429374660225974,0,0,0,0,0,25.138056586149,0,0,0,0,1.61745985258653,0,0.421258456238981,0,3.89941583410055,0,0.136499911407986,0.565621727814851,1.13008116620243,2.75682671773062,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,487.85317562527,0,0,0,0,0.507447609232169,0,0.569647187174163,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,14.7459135001922,6.56188106444037,0,2.52717460302113,3.87998954356427,115.159723393172,47.6205506471128,0,6.74469915435538,0.201799707191048,0.425846237690326,3.43505344755765,0,0,0,0,3.06246791284767,2.46174797895425,49.4933891611049,0.33307196799782,33.8368812210839,0,0,0,0,0,3791.97865108873,70.9745587190006,2.76444631889309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0.108647371922008,21618.7085950322,235.863803009795,18881.6908709081,0,1566.19201805316,1698.5171773377,0.451191321234361,0.392125068635479,0.167821586975843,3.41556718903533,197.08135793567,0,0,0,0,0,0,1.22206028986725,0.296521128680622,0,0,0.404406797884062,1.60515529459758,0,0,0,0,0,2.41981432097328,2.14250933141343,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0.279282401272254,2.97908551215189,0,0,0,0,3.89664140423012,7.56629755439048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,2.7800931711549,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,11.9034155086541,0,0,0.146552233678082,304.765844498109,0,0,0,0,2.56289790162467,5.03053776318931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,1.10961172300523,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.300515217994437,0.380805212168795,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,665.00955118358,0,0,0,0,87.0908164046162,0,0.970423302570136,0,0,0.509197589862076,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,1941.96098997065,0,0,0.0679697329768317,0,0,0,0,0,0,2.73947616152849,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,6.95888658802919,14.085618798715,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,2.5359343655004,0,1.50374268767766,37.1277434727805,0,0,0,0,0.730336388246517,0,0,0,0,7.85431242612679,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4337408597618,0,8.07361372950076,65.3646741535384,0.112131862580613,0,0,0,1.02669990325584,0.134704106029175,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p1@PRG2 | |short_description=p1@PRG2 | ||
}} | }} |
Latest revision as of 09:22, 18 September 2015
Short description: | p1@PRG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRG2_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000311862, ENST00000533605, NM_001243245, NM_002728, uc001njy.1, uc001nkc.2, uc001nkd.2_5end |
EntrezGene: | PRG2 |
HGNC: | 9362 |
UniProt: | P13727A6XMW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.12e-11 | 108 |
common myeloid progenitor | 1.12e-11 | 108 |
chorionic membrane mesenchymal stem cell | 2.76e-10 | 3 |
erythroid lineage cell | 3.17e-07 | 2 |
erythroblast | 3.17e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 3.17e-07 | 2 |
erythroid progenitor cell | 3.17e-07 | 2 |
reticulocyte | 3.17e-07 | 2 |
proerythroblast | 3.17e-07 | 2 |
basophilic erythroblast | 3.17e-07 | 2 |
polychromatophilic erythroblast | 3.17e-07 | 2 |
orthochromatic erythroblast | 3.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.76e-10 | 3 |
extraembryonic membrane | 7.06e-10 | 14 |
membranous layer | 7.06e-10 | 14 |
chorion | 1.81e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.45e-22 | 31 |
leukemia | 7.90e-17 | 39 |
hematologic cancer | 7.62e-12 | 51 |
immune system cancer | 7.62e-12 | 51 |