FFCP PHASE1:Hg19::chr20:2637436..2637450,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26792 | |EntrezGene=26792 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10207 | |HGNC=10207 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-134bp_to_ENST00000448188,NR_002738,uc002wgo.1_5end | |association_with_transcript=-134bp_to_ENST00000448188,NR_002738,uc002wgo.1_5end | ||
|cluster_id=chr20:2637436..2637450,+ | |||
|description=CAGE_peak_1_at_SNORD57_5end | |description=CAGE_peak_1_at_SNORD57_5end | ||
|id=chr20:2637436..2637450,+ | |id=chr20:2637436..2637450,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:14566!2.26e-35!239;DOID:162!3.01e-34!235;DOID:0050687!1.61e-21!143;DOID:305!1.28e-17!106;DOID:0050686!3.35e-14!137;DOID:2531!1.33e-07!51;DOID:0060083!1.33e-07!51 | |ontology_enrichment_disease=DOID:14566!2.26e-35!239;DOID:162!3.01e-34!235;DOID:0050687!1.61e-21!143;DOID:305!1.28e-17!106;DOID:0050686!3.35e-14!137;DOID:2531!1.33e-07!51;DOID:0060083!1.33e-07!51 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:14566,1.32e-16,239;DOID:162,2.52e-16,235;DOID:0050687,1.28e-11,143;DOID:305,2.20e-10,106 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001557,6.47e-07,19 | |||
|phase1_expression=0.181678379270557,1.71280419112787,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0,0,0,0.821246550437305,0.376627918784408,1.22261449196722,1.39571002064908,1.18066171970519,0,0,0.154816123316076,0,0,0.369754010166788,0.92960640696362,0.710846162437108,0,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0.232429036905685,0,0.929119112685311,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,1.17447437874188,1.91136614062614,0,0,0.263384084775077,0,0.786021525498329,0.822405995998037,0.167186495390678,0,0,0,0,0,0,0,0.768547918354051,0.650296737799391,0.493313713811028,0.552700035571697,0,0.296573126324121,0.535081656179426,0,0.113309342697566,0,0,0.759059076058509,0,0,0,0,0,0,0.236777252044017,0.821127996921047,0.201606743224732,0.802320587350522,0.724122019413995,0,0,0.255725123687061,0.361439152384566,0,0.434539556882471,0.795285947051099,0,0.0945348171640679,0.221729397462564,0,0.130979075497713,0,0.741568885568859,0,0,0.26591592103773,0.476981248610684,0.571994910780128,0,0.198762407366705,0,0,0,0,1.37559020970034,0.417989933073621,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.563057402416611,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0,0,0.151357427644931,0,0,0.312160076830321,0,0.448346041655403,0.469737994575059,0,0.280901613404497,0,0.859840221182376,0,0,0.741800787835671,0,0,0.673344455816265,0.625592599359821,0,0,0.30648779579902,0.300476117813194,0.453728732640084,0.358779271377724,0,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0.843881661206331,0,0.252433774244115,0.368199594569197,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0.286804595389004,0.365921118388786,0.397589304964456,0.464775771478074,0.414644220061482,0.504641701751257,1.09493207722749,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.828147600278907,0.505754070234305,0.482022059766964,1.98529150918309,1.30727666455444,1.18635309555548,1.21348177344148,0.98110732562673,1.15424147083917,0,0,0,0,0,0,0,3.5317047953172,0.368965315629341,0,0.329250856225877,0,0.703702806881416,0.185176890317059,0,0,1.44331342025273,0,0,0.144366447761074,0.462985512576611,0.570762456703795,0.790204397959275,0,0,0,0.297262324577456,0,0.335964256397719,0.141775097242386,0.447792613514241,0.290633938513962,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0,0.253991577168676,0,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0,0,0.1466765716419,0.387815147273333,0,1.690605505112,0,0,0,0,0.266422179016099,0,0,0,0.977208552881205,0,0,0,0.871533458600294,0.599837947092342,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0.289562613335158,0.410952645100767,0.179060963239896,1.2329365839288,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0.502548796003046,2.55175500661265,0,0,0,0.24538298343828,0,0,0,1.60586089917446,0.473107245101804,0,0,2.27407504055985,0,0.664225598535437,0.368738337083406,0.0868836144680828,0,0,0.206768026122887,0,0.213455115606889,0.606255142892519,1.66435439510497,0.907170879989041,0,0,0.841980283299221,0,0,0.160853921143607,0,1.54209693802656,0.177561725313127,0.574890092096664,0,0.813472649219715,1.0877350463246,0.200506470303285,0.828728900423067,0.459257792658427,0.910455840033585,0.393373244878272,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,1.94324324491925,0,0,0,0,0.831076008928724,0.223874754722178,0.219259876645935,0,0.256450125116389,0,0.650756789328606,0.103041011647722,1.19040304263846,0.247528499761764,0,0,0,0.290012154876366,0.154048617114644,0.307007349452259,0.275673144969061,0,0.580066775656914,0.170453254832202,0.178064071293475,0,0.576570202095319,0.510450849978337,0.30347334256665,0,0,1.3940745403212,0.308033580176089,0,0,0,0.143124886741991,0,0.316379424718726,0,0.511795582622668,0,0,0,0.179872457583315,0.54907405947211,0.589062011728432,0,0,0.421258456238981,0,0,0,0.272999822815972,0.989838023675989,1.13008116620243,0,0.66343897524122,0.876901770507525,0,0.655894752046633,0,0.30982349809975,0,0.143411352204052,0.196498082026242,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,1.13929437434833,0.238231775457789,0,0,0,0,0.320472213382419,0,0.490080431962063,2.04383492638291,0.577076851905779,0.426851060090485,1.91311527274587,1.99579371432817,0,0.635020748171649,0.649243880549111,0.842391534340376,0,2.50687833236837,2.50634477090067,2.20079311142084,1.2847046008296,3.02699560786571,0,0.343505344755765,0.614481528616916,0,0.333698283423817,0.586164286206121,0.835218521685727,0,0.540911356951966,0.33307196799782,0,0.18714054040822,0.439524537815682,0.121360521749513,0.557216921387392,0,0,0,0,0.994147647766298,0.703347082052564,0.222617410045812,0.988823245360557,0,0,0,1.76352923497993,0.30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| ||
|short_description=p1@SNORD57 | |short_description=p1@SNORD57 | ||
}} | }} |
Latest revision as of 23:32, 24 September 2015
Short description: | p1@SNORD57 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNORD57_5end |
Coexpression cluster: | NA |
Association with transcript: | -134bp_to_ENST00000448188, NR_002738, uc002wgo.1_5end |
EntrezGene: | SNORD57 |
HGNC: | 10207 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
upper respiratory tract | 6.47e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.32e-16 | 239 |
cancer | 2.52e-16 | 235 |
cell type cancer | 1.28e-11 | 143 |
carcinoma | 2.20e-10 | 106 |