FFCP PHASE1:Hg19::chr1:52520828..52520888,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51060 | |EntrezGene=51060 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24626 | |HGNC=24626 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000472624_5end | |association_with_transcript=0bp_to_ENST00000472624_5end | ||
|cluster_id=chr1:52520828..52520888,- | |||
|description=CAGE_peak_1_at_TXNDC12_5end | |description=CAGE_peak_1_at_TXNDC12_5end | ||
|id=chr1:52520828..52520888,- | |id=chr1:52520828..52520888,- | ||
|ontology_enrichment_celltype=CL:0000063!2.55e-28!578;CL:0000012!3.62e-27!682;CL:0000548!3.96e-27!679;CL:0000004!3.96e-27!679;CL:0000255!3.96e-27!679;CL:0000003!2.21e-24!722;CL:0000144!6.57e-17!625;CL:0000763!4.76e-14!112;CL:0000049!4.76e-14!112;CL:0000066!6.17e-12!254;CL:0002371!2.32e-11!591;CL:0000766!2.50e-10!76;CL:0000034!2.05e-09!444;CL:0002009!3.56e-09!65;CL:0000134!8.64e-09!358;CL:0002194!1.16e-08!63;CL:0000576!1.16e-08!63;CL:0000040!1.16e-08!63;CL:0000559!1.16e-08!63;CL:0000723!1.96e-08!436;CL:0000048!2.64e-08!430;CL:0000557!6.44e-08!71;CL:0002320!2.21e-07!365;CL:0000219!2.46e-07!390;CL:0002032!2.52e-07!165;CL:0000837!2.52e-07!165;CL:0000037!4.89e-07!172;CL:0000566!4.89e-07!172;CL:0000839!9.04e-07!70 | |ontology_enrichment_celltype=CL:0000063!2.55e-28!578;CL:0000012!3.62e-27!682;CL:0000548!3.96e-27!679;CL:0000004!3.96e-27!679;CL:0000255!3.96e-27!679;CL:0000003!2.21e-24!722;CL:0000144!6.57e-17!625;CL:0000763!4.76e-14!112;CL:0000049!4.76e-14!112;CL:0000066!6.17e-12!254;CL:0002371!2.32e-11!591;CL:0000766!2.50e-10!76;CL:0000034!2.05e-09!444;CL:0002009!3.56e-09!65;CL:0000134!8.64e-09!358;CL:0002194!1.16e-08!63;CL:0000576!1.16e-08!63;CL:0000040!1.16e-08!63;CL:0000559!1.16e-08!63;CL:0000723!1.96e-08!436;CL:0000048!2.64e-08!430;CL:0000557!6.44e-08!71;CL:0002320!2.21e-07!365;CL:0000219!2.46e-07!390;CL:0002032!2.52e-07!165;CL:0000837!2.52e-07!165;CL:0000037!4.89e-07!172;CL:0000566!4.89e-07!172;CL:0000839!9.04e-07!70 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.69e-13,108;CL:0000049,1.69e-13,108;CL:0000066,3.02e-12,253;CL:0000766,8.15e-10,72;CL:0000034,6.30e-09,441;CL:0002009,1.13e-08,61;CL:0000134,1.49e-08,354;CL:0002194,3.68e-08,59;CL:0000576,3.68e-08,59;CL:0000040,3.68e-08,59;CL:0000559,3.68e-08,59;CL:0000723,5.57e-08,433;CL:0000048,7.43e-08,427;CL:0000557,2.01e-07,67;CL:0002320,3.64e-07,361;CL:0000219,4.08e-07,386;CL:0002032,6.81e-07,161;CL:0000837,6.81e-07,161 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:14566!7.39e-23!239;DOID:162!3.77e-22!235;DOID:305!3.44e-13!106;DOID:0050686!2.00e-12!137;DOID:0050687!2.65e-11!143;DOID:8692!1.52e-08!31;DOID:1240!3.16e-08!39 | |ontology_enrichment_disease=DOID:14566!7.39e-23!239;DOID:162!3.77e-22!235;DOID:305!3.44e-13!106;DOID:0050686!2.00e-12!137;DOID:0050687!2.65e-11!143;DOID:8692!1.52e-08!31;DOID:1240!3.16e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.95e-08;31 | |ontology_enrichment_disease_v019=DOID:8692;2.95e-08;31 | ||
|ontology_enrichment_disease_v019_2=DOID:14566,7.39e-23,239;DOID:162,3.77e-22,235;DOID:305,3.44e-13,106;DOID:0050686,2.00e-12,137;DOID:0050687,2.65e-11,143;DOID:8692,1.52e-08,31;DOID:1240,3.16e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001474!3.29e-08!86;UBERON:0002384!1.03e-07!375;UBERON:0002371!6.67e-07!80 | |ontology_enrichment_uberon=UBERON:0001474!3.29e-08!86;UBERON:0002384!1.03e-07!375;UBERON:0002371!6.67e-07!80 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.02e-07,82;UBERON:0002384,1.73e-07,371;UBERON:0004765,5.73e-07,90 | |||
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| ||
|short_description=p1@TXNDC12 | |short_description=p1@TXNDC12 | ||
}} | }} |
Latest revision as of 12:26, 18 September 2015
Short description: | p1@TXNDC12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TXNDC12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000472624_5end |
EntrezGene: | TXNDC12 |
HGNC: | 24626 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.69e-13 | 108 |
common myeloid progenitor | 1.69e-13 | 108 |
epithelial cell | 3.02e-12 | 253 |
myeloid leukocyte | 8.15e-10 | 72 |
stem cell | 6.30e-09 | 441 |
macrophage dendritic cell progenitor | 1.13e-08 | 61 |
mesenchymal cell | 1.49e-08 | 354 |
monopoietic cell | 3.68e-08 | 59 |
monocyte | 3.68e-08 | 59 |
monoblast | 3.68e-08 | 59 |
promonocyte | 3.68e-08 | 59 |
somatic stem cell | 5.57e-08 | 433 |
multi fate stem cell | 7.43e-08 | 427 |
granulocyte monocyte progenitor cell | 2.01e-07 | 67 |
connective tissue cell | 3.64e-07 | 361 |
motile cell | 4.08e-07 | 386 |
hematopoietic oligopotent progenitor cell | 6.81e-07 | 161 |
hematopoietic multipotent progenitor cell | 6.81e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.02e-07 | 82 |
connective tissue | 1.73e-07 | 371 |
skeletal element | 5.73e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 7.39e-23 | 239 |
cancer | 3.77e-22 | 235 |
carcinoma | 3.44e-13 | 106 |
organ system cancer | 2.00e-12 | 137 |
cell type cancer | 2.65e-11 | 143 |
myeloid leukemia | 1.52e-08 | 31 |
leukemia | 3.16e-08 | 39 |