FFCP PHASE1:Hg19::chr20:32810271..32810284,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:32810271..32810284,+ | |||
|coexpression_cluster_id=C132 | |coexpression_cluster_id=C132 | ||
|description=CAGE_peak_at_chr20:32810271..32810284,+ | |description=CAGE_peak_at_chr20:32810271..32810284,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002620!6.65e-14!23;CL:0000057!9.72e-10!75;CL:0000055!3.79e-08!180;CL:0000219!3.94e-08!390;CL:0002194!5.27e-08!63;CL:0000576!5.27e-08!63;CL:0000040!5.27e-08!63;CL:0000559!5.27e-08!63;CL:0002009!1.27e-07!65;CL:0002320!4.07e-07!365;CL:0000839!9.01e-07!70 | |ontology_enrichment_celltype=CL:0002620!6.65e-14!23;CL:0000057!9.72e-10!75;CL:0000055!3.79e-08!180;CL:0000219!3.94e-08!390;CL:0002194!5.27e-08!63;CL:0000576!5.27e-08!63;CL:0000040!5.27e-08!63;CL:0000559!5.27e-08!63;CL:0002009!1.27e-07!65;CL:0002320!4.07e-07!365;CL:0000839!9.01e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000228;1.78e-16;1!CL:0002372;1.78e-16;1!CL:0002540;4.60e-11;6!CL:0002363;4.52e-09;2!CL:0002367;6.67e-09;2!CL:0002092;5.42e-07;10 | |ontology_enrichment_celltype_v019=CL:0000228;1.78e-16;1!CL:0002372;1.78e-16;1!CL:0002540;4.60e-11;6!CL:0002363;4.52e-09;2!CL:0002367;6.67e-09;2!CL:0002092;5.42e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000228,1.21e-16,1;CL:0002372,1.21e-16,1;CL:0002540,4.84e-11,6;CL:0002363,4.70e-09,2;CL:0000008,4.70e-09,2;CL:0002367,7.49e-09,2;CL:0002092,5.59e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000008;4.52e-09;2 | |ontology_enrichment_development_v019=CL:0000008;4.52e-09;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3193;6.67e-09;2!DOID:962;6.67e-09;2 | |ontology_enrichment_disease_v019=DOID:3193;6.67e-09;2!DOID:962;6.67e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3193,6.94e-09,2;DOID:962,6.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002097!2.97e-09!40;UBERON:0002199!5.52e-09!45;UBERON:0002416!5.52e-09!45;UBERON:0004765!2.87e-08!101;UBERON:0001434!2.87e-08!101;UBERON:0002384!3.63e-08!375;UBERON:0002371!4.97e-08!80;UBERON:0001474!4.13e-07!86 | |ontology_enrichment_uberon=UBERON:0002097!2.97e-09!40;UBERON:0002199!5.52e-09!45;UBERON:0002416!5.52e-09!45;UBERON:0004765!2.87e-08!101;UBERON:0001434!2.87e-08!101;UBERON:0002384!3.63e-08!375;UBERON:0002371!4.97e-08!80;UBERON:0001474!4.13e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0003566;4.52e-09;2!UBERON:0001777;4.52e-09;2!UBERON:0003714;6.67e-09;2!UBERON:0005969;6.67e-09;2!UBERON:0003956;6.67e-09;2 | |ontology_enrichment_uberon_v019=UBERON:0003566;4.52e-09;2!UBERON:0001777;4.52e-09;2!UBERON:0003714;6.67e-09;2!UBERON:0005969;6.67e-09;2!UBERON:0003956;6.67e-09;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,4.70e-09,2;UBERON:0001777,4.70e-09,2;UBERON:0003714,6.94e-09,2;UBERON:0005969,7.49e-09,2;UBERON:0003956,7.49e-09,2;UBERON:0002371,5.74e-07,76 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0.649094787309367,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0.23486899728753,0.323745888736263,0.702254033511242,0.204154171254893,0,0.206651562351531,0,0,0,0,0.336672227908132,0.375355559615893,0,0,0,0,0,0.179389635688862,0,0,0.600182192168805,0.412210116953756,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0.710019185033229,0.806016785821122,1.01736355386293,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07986957055916,0,0,0.117408694235822,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0,0.22001485746285,0,0,0,0,0,1.02882949704857,1.41849132023278,0.799266537048298,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,1.42636905040718,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.537101224341368,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,3.37964840739304,6.93395934466489,3.50383197595008,0.976940477010201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511343412510774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.290967049465258,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0.203996435272644,1.15580235960608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917899467677836,0,0,0.752122617877125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 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|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0.649094787309367,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0.23486899728753,0.323745888736263,0.702254033511242,0.204154171254893,0,0.206651562351531,0,0,0,0,0.336672227908132,0.375355559615893,0,0,0,0,0,0.179389635688862,0,0,0.600182192168805,0.412210116953756,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0.710019185033229,0.806016785821122,1.01736355386293,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07986957055916,0,0,0.117408694235822,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0,0.22001485746285,0,0,0,0,0,1.02882949704857,1.41849132023278,0.799266537048298,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,1.42636905040718,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.537101224341368,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,3.37964840739304,6.93395934466489,3.50383197595008,0.976940477010201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511343412510774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.290967049465258,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0.203996435272644,1.15580235960608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917899467677836,0,0,0.752122617877125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr20:32810271..32810284,+ | |short_description=p@chr20:32810271..32810284,+ | ||
}} | }} |
Latest revision as of 13:13, 28 July 2015
Short description: | p@chr20:32810271..32810284, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:32810271..32810284, + |
Coexpression cluster: | C132_acute_small_Dendritic_Macrophage_CD14_Neutrophils_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 1.21e-16 | 1 |
myotube | 1.21e-16 | 1 |
mesenchymal stem cell of the bone marrow | 4.84e-11 | 6 |
keratocyte | 4.70e-09 | 2 |
migratory cranial neural crest cell | 4.70e-09 | 2 |
trabecular meshwork cell | 7.49e-09 | 2 |
bone marrow cell | 5.59e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 4.70e-09 | 2 |
substantia propria of cornea | 4.70e-09 | 2 |
neural tissue | 6.94e-09 | 2 |
reticulum trabeculare | 7.49e-09 | 2 |
aqueous drainage system | 7.49e-09 | 2 |
bone marrow | 5.74e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 6.94e-09 | 2 |
neurofibroma | 6.94e-09 | 2 |