FFCP PHASE1:Hg19::chr13:75884283..75884317,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:75884283..75884317,- | |||
|coexpression_cluster_id=C61 | |coexpression_cluster_id=C61 | ||
|description=CAGE_peak_at_chr13:75884283..75884317,- | |description=CAGE_peak_at_chr13:75884283..75884317,- | ||
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|ontology_enrichment_celltype=CL:0000990!5.32e-25!8;CL:0000451!4.53e-20!10;CL:0000840!4.89e-17!5;CL:0001029!4.89e-17!5;CL:0000453!5.35e-15!5;CL:0001014!5.32e-07!2;CL:0001016!5.32e-07!2 | |ontology_enrichment_celltype=CL:0000990!5.32e-25!8;CL:0000451!4.53e-20!10;CL:0000840!4.89e-17!5;CL:0001029!4.89e-17!5;CL:0000453!5.35e-15!5;CL:0001014!5.32e-07!2;CL:0001016!5.32e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000990;1.90e-139;8!CL:0000451;3.99e-114;10!CL:0000453;2.30e-99;5!CL:0000840;8.36e-82;5!CL:0001014;7.33e-41;2!CL:0001016;7.33e-41;2 | |ontology_enrichment_celltype_v019=CL:0000990;1.90e-139;8!CL:0000451;3.99e-114;10!CL:0000453;2.30e-99;5!CL:0000840;8.36e-82;5!CL:0001014;7.33e-41;2!CL:0001016;7.33e-41;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000990,1.90e-139,8;CL:0000451,3.99e-114,10;CL:0000453,2.30e-99,5;CL:0000840,8.36e-82,5;CL:0001029,8.36e-82,5;CL:0001014,7.33e-41,2;CL:0001016,7.33e-41,2;CL:0000763,2.45e-11,108;CL:0000049,2.45e-11,108;CL:0000738,6.18e-09,136;CL:0002009,4.15e-08,61;CL:0002032,1.75e-07,161;CL:0000837,1.75e-07,161;CL:0000557,2.14e-07,67;CL:0000037,3.74e-07,168;CL:0000988,9.13e-07,177 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.26e-09!7;UBERON:0002106!1.53e-08!3;UBERON:0004854!1.53e-08!3;UBERON:0009034!1.53e-08!3;UBERON:0002095!1.53e-08!3;UBERON:0004782!1.53e-08!3;UBERON:0003281!1.53e-08!3;UBERON:0009664!1.53e-08!3;UBERON:0002296!1.53e-08!3;UBERON:0005602!1.53e-08!3;UBERON:0001179!1.53e-08!3;UBERON:0006293!1.53e-08!3;UBERON:0000945!4.13e-08!8;UBERON:0010039!4.13e-08!8;UBERON:0002405!5.64e-07!115 | |ontology_enrichment_uberon=UBERON:0004177!1.26e-09!7;UBERON:0002106!1.53e-08!3;UBERON:0004854!1.53e-08!3;UBERON:0009034!1.53e-08!3;UBERON:0002095!1.53e-08!3;UBERON:0004782!1.53e-08!3;UBERON:0003281!1.53e-08!3;UBERON:0009664!1.53e-08!3;UBERON:0002296!1.53e-08!3;UBERON:0005602!1.53e-08!3;UBERON:0001179!1.53e-08!3;UBERON:0006293!1.53e-08!3;UBERON:0000945!4.13e-08!8;UBERON:0010039!4.13e-08!8;UBERON:0002405!5.64e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0004177;1.12e-16;5!UBERON:0005057;1.12e-16;5!UBERON:0002370;4.52e-11;2!UBERON:0005058;4.52e-11;2!UBERON:0009113;4.52e-11;2!UBERON:0002106;6.34e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0004177;1.12e-16;5!UBERON:0005057;1.12e-16;5!UBERON:0002370;4.52e-11;2!UBERON:0005058;4.52e-11;2!UBERON:0009113;4.52e-11;2!UBERON:0002106;6.34e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.34e-12,7;UBERON:0005057,3.34e-12,7;UBERON:0002405,4.57e-10,93;UBERON:0002390,1.52e-09,98;UBERON:0003061,1.52e-09,98;UBERON:0002193,1.22e-08,108;UBERON:0002106,6.34e-08,3;UBERON:0004854,6.34e-08,3;UBERON:0009034,6.34e-08,3;UBERON:0002095,6.34e-08,3;UBERON:0004782,6.34e-08,3;UBERON:0003281,6.34e-08,3;UBERON:0009664,6.34e-08,3;UBERON:0002296,6.34e-08,3;UBERON:0005602,6.34e-08,3;UBERON:0001179,6.34e-08,3;UBERON:0006293,6.34e-08,3 | |||
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| ||
|short_description=p@chr13:75884283..75884317,- | |short_description=p@chr13:75884283..75884317,- | ||
}} | }} |
Latest revision as of 17:04, 24 July 2015
Short description: | p@chr13:75884283..75884317, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:75884283..75884317, - |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 1.90e-139 | 8 |
dendritic cell | 3.99e-114 | 10 |
Langerhans cell | 2.30e-99 | 5 |
immature conventional dendritic cell | 8.36e-82 | 5 |
common dendritic progenitor | 8.36e-82 | 5 |
CD1a-positive Langerhans cell | 7.33e-41 | 2 |
immature CD1a-positive Langerhans cell | 7.33e-41 | 2 |
myeloid cell | 2.45e-11 | 108 |
common myeloid progenitor | 2.45e-11 | 108 |
leukocyte | 6.18e-09 | 136 |
macrophage dendritic cell progenitor | 4.15e-08 | 61 |
hematopoietic oligopotent progenitor cell | 1.75e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.75e-07 | 161 |
granulocyte monocyte progenitor cell | 2.14e-07 | 67 |
hematopoietic stem cell | 3.74e-07 | 168 |
hematopoietic cell | 9.13e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 3.34e-12 | 7 |
immune organ | 3.34e-12 | 7 |
immune system | 4.57e-10 | 93 |
hematopoietic system | 1.52e-09 | 98 |
blood island | 1.52e-09 | 98 |
hemolymphoid system | 1.22e-08 | 108 |
spleen | 6.34e-08 | 3 |
gastrointestinal system mesentery | 6.34e-08 | 3 |
stomach region | 6.34e-08 | 3 |
mesentery | 6.34e-08 | 3 |
gastrointestinal system serosa | 6.34e-08 | 3 |
mesentery of stomach | 6.34e-08 | 3 |
gut mesentery | 6.34e-08 | 3 |
dorsal mesentery | 6.34e-08 | 3 |
dorsal mesogastrium | 6.34e-08 | 3 |
peritoneal cavity | 6.34e-08 | 3 |
spleen primordium | 6.34e-08 | 3 |